Contig 008490:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016O03Sequence430003390 (5)ref|XP_009627336.1|49.3PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis] ref|753008490 (3)ref|XP_011088545.1|157PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885
JMSF029M19Sequence658003390 (5)ref|XP_009627336.1|137PREDICTED: probable transcription factor PosF21 [Nicotiana tomentosiformis] ref|696008490 (3)ref|XP_011088545.1|143PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885
JMSF046G11Sequence789003390 (5)ref|XP_009804619.1|123PREDICTED: probable transcription factor PosF21 [Nicotiana sylvestris] ref|XP_00829008490 (3)ref|XP_011088545.1|223PREDICTED: uncharacterized protein LOC105169746 [Sesamum indicum] ref|XP_0110885

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF046G11+ TAGATTCAAATTCAA
                      ____________________________________________________________
consensus TAGATTCAAATTCAA
 
. : . : . : . : . : . :
rJMSF046G11+ ACACATTTAGTTTGGAGTTTGGGAACGGTGAATTTAGTGGGGCTGAANCTGAAAAAGATC
                      ____________________________________________________________
consensus ACACATTTAGTTTGGAGTTTGGGAACGGTGAATTTAGTGGGGCTGAANCTGAAAAAGATC
 
. : . : . : . : . : . :
rJMSF046G11+ ATGGCTAATGAGAAACTTGCTGAGATTGCATTAACAGATCCAAAACGTGCCAAAAGAATT
                      ____________________________________________________________
consensus ATGGCTAATGAGAAACTTGCTGAGATTGCATTAACAGATCCAAAACGTGCCAAAAGAATT
 
. : . : . : . : . : . :
rJMSF046G11+ TTGGCCAACCGTCAATNTGCTGCTCGTTCCAAGGAACGCAAGATGAGGTACATTGCAGAG
rJMSF029M19+ AAGATGAGGTACATTGCAGAG
rJMSF016O03+ TCCAAGGAACGCAAGATGAGGTACATTGCAGAG
                      ____________________________________________________________
consensus TTGGCCAACCGTCAATNTGCTGCTCGTTCCAAGGAACGCAAGATGAGGTACATTGCAGAG
 
. : . : . : . : . : . :
rJMSF046G11+ TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
rJMSF029M19+ TTAGAACATAAGGTGCAAACATTGCAGACTGAGGNTACAACATTGTCTGCCCAACNTACA
rJMSF016O03+ TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
                      ____________________________________________________________
consensus TTAGAACATAAGGTGCAAACATTGCAGACTGAGGCTACAACATTGTCTGCCCAACTTACA
 
. : . : . : . : . : . :
rJMSF046G11+ CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
rJMSF029M19+ CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
rJMSF016O03+ CTTCTGCAGAGAGACTNTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
                      ____________________________________________________________
consensus CTTCTGCAGAGAGACTCTGCTGGGCTAACAAGCCAAAATAATGAATTGAAATTTCGCTTG
 
. : . : . : . : . : . :
rJMSF046G11+ CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
rJMSF029M19+ CAAGCCATGGAACAACAAGCTCAANTTCGTGATGCTNTGAATGAAGCATTAACTGCGGAA
rJMSF016O03+ CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
                      ____________________________________________________________
consensus CAAGCCATGGAACAACAAGCTCAACTTCGTGATGCTCTGAATGAAGCATTAACTGCGGAA
 
. : . : . : . : . : . :
rJMSF046G11+ GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
rJMSF029M19+ GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
rJMSF016O03+ GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
                      ____________________________________________________________
consensus GTCCAACGCCTGAAGATAGCAACGGCTGAACTAAACGGAGATGCCACCAAGTTTCAACAG
 
. : . : . : . : . : . :
rJMSF046G11+ CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
rJMSF029M19+ CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
rJMSF016O03+ CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
                      ____________________________________________________________
consensus CTTTCGATCAATCCTCAGATGTTGCCGATGCACCAACATCAGTCTGCTCGAGTAAACATG
 
. : . : . : . : . : . :
rJMSF046G11+ CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
rJMSF029M19+ CATCAGTTGCAGCAACAGCAACAGCATCAACAATNGTNCCAGCCTCAGCCGCAGCATAAC
rJMSF016O03+ CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
                      ____________________________________________________________
consensus CATCAGTTGCAGCAACAGCAACAGCATCAACAATCGTCCCAGCCTCAGCCGCAGCATAAC
 
. : . : . : . : . : . :
rJMSF046G11+ AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
rJMSF029M19+ AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
rJMSF016O03+ AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
                      ____________________________________________________________
consensus AATACTGCATCAGCAAAGCATGAGTCGAAGTAATAGCAGCTTTTGATCGACGGCACACAA
 
. : . : . : . : . : . :
rJMSF046G11+ TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
rJMSF029M19+ TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
rJMSF016O03+ TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
                      ____________________________________________________________
consensus TTTGAAAAAATAGAAAGAAAAAAAAATCAATGTGTGCCTATGGCCCTGCTTTCTATACTA
 
. : . : . : . : . : . :
rJMSF046G11+ GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
rJMSF029M19+ GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
rJMSF016O03+ GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
                      ____________________________________________________________
consensus GTAATATCCCATTCAATGCATTCATTCATTAGTTTTGTGTTTGCAAGAAACATGCCAAGG
 
. : . : . : . : . : . :
rJMSF046G11+ CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
rJMSF029M19+ CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
rJMSF016O03+ CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
                      ____________________________________________________________
consensus CAGCATTTTACATGATGTACTGCTCGCTCTTAAGCACTTAAATTTCGGTTACTTGTCATA
 
. : . : . : . : . : . :
rJMSF046G11+ TACGGGCTTTAATATATAGTAGGGAGTATATAT
rJMSF029M19+ TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATT
rJMSF016O03+ TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATTTGGA
                      ____________________________________________________________
consensus TACGGGCTTTAATATATAGTAGGGAGTATATATTGTTTACATGAACTTATGACATTTGGA
 
. : . : . : . : . : . :
rJMSF016O03+ AAGGTGAACTCAGATGTTCTGTCAACCAGTAGTGGTTTTCGAAGCTCCTTTCCCTGTTGT
                      ____________________________________________________________
consensus AAGGTGAACTCAGATGTTCTGTCAACCAGTAGTGGTTTTCGAAGCTCCTTTCCCTGTTGT