| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011G24 | Sequence | 332 | 008471 (5) | ref|XP_011457707.1| | 2e-25 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like | |||||
| JMFN020E21 | Sequence | 521 | 008471 (5) | ref|XP_010254745.1| | 4e-40 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like | |||||
| JMSF012N01 | Sequence | 240 | 000662 (7) | 775 | 008471 (5) | ref|XP_009600157.1| | 9e-73 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like | |||
| JMSF026L21 | Sequence | 670 | 000662 (7) | gb|KDO47894.1| | 4e-54 | hypothetical protein CISIN_1g006449mg [Citrus sinensis] | 686 | 008471 (5) | ref|XP_009600133.1| | 1e-61 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like |
| JMSF034H14 | Sequence | 686 | 000662 (7) | gb|KDO47894.1| | 8e-57 | hypothetical protein CISIN_1g006449mg [Citrus sinensis] | 686 | 008471 (5) | ref|XP_009600133.1| | 5e-59 | PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like |
This contig is upended
. : . : . : . : . : . :
rJMSF026L21+ TGGA
rJMSF012N01+ TCAGGATATGATGAATATGTTCCCATGGNTGATAAGGCTGTCGATTCTGGATGGA
____________________________________________________________
consensus TCAGGATATGATGAATATGTTCCCATGGNTGATAAGGCTGTCGATTCTGGATGGA
. : . : . : . : . : . :
rJMSF026L21+ AAAAGCAAACGGAATCTGAAAAGCCCTGTGTTCCTACAGTGATCCTTCCACCACCCGACT
rJMSF034H14+ AAACGGAATCTGAAAAGCCCTGTGTTCCTACAGTGATCCTTCCACCACCCGACT
rJMSF012N01+ AAAAGCAAACGGAATCTGAAAAGCCCTGTGTTCCTACAGTGATCCTTCCACCACCCGACT
____________________________________________________________
consensus AAAAGCAAACGGAATCTGAAAAGCCCTGTGTTCCTACAGTGATCCTTCCACCACCCGACT
. : . : . : . : . : . :
rJMSF026L21+ CTCAAAAGACTACTGAAGGACTTCATGCCCGCTTTCTAGGAGCTCTAATGGCTTTCTTCT
rJMSF034H14+ CTCAAAAGACTACTGAAGGACTTCATGCCCGCTTTCTAGGAGCTCTAATGGCTTTCTTCT
rJMSF012N01+ CTCAAAAGACTACTGAAGGACTTCATGCCCGCTTTCTAGGAGCTCTAATGGCTTTCTTCT
____________________________________________________________
consensus CTCAAAAGACTACTGAAGGACTTCATGCCCGCTTTCTAGGAGCTCTAATGGCTTTCTTCT
. : . : . : . : . : . :
rJMSF026L21+ TCACTTTCTTCATACTTTTGCGTTCGGTGGCTTCCAGTGTAACCAAGAAGCTTCCAATTG
rJMSF034H14+ TCACTTTCTTCATACTTTTGCGTTCGGTGGCTTCCAGTGTAACCAAGAAGCTTCCAATTG
JMFN020E21- ATTG
rJMSF012N01+ TCACTTTCTTCATACTTTTGCGTTCGGTGGCTTCCAGTGTAACCAAGAAGCTTCCAATTG
____________________________________________________________
consensus TCACTTTCTTCATACTTTTGCGTTCGGTGGCTTCCAGTGTAACCAAGAAGCTTCCAATTG
. : . : . : . : . : . :
rJMSF026L21+ CATCCTCTAATCAAAGCAAACTTTGTGAATTTTCTTCTGAATCAATTCCAAAGGAAGAGT
rJMSF034H14+ CATCCTCTAATCAAAGCAAACTTTGTGAATTTTCTTCTGAATCAATTCCAAAGGAAGAGT
JMFN020E21- CATCCTCTAATCAAAGCAAACTTTGTGAATTTTCTTCTGAATCAATTCCAAAGGAAGAGT
rJMSF012N01+ CATCCTCTAATCAAAGCAAACTTTGTGAATTTTCTTCTGAATCAATTCCAAAGGAAGAGT
____________________________________________________________
consensus CATCCTCTAATCAAAGCAAACTTTGTGAATTTTCTTCTGAATCAATTCCAAAGGAAGAGT
. : . : . : . : . : . :
rJMSF026L21+ TTAGGCCCCCTTCACCAACGCCAGCACCTTCAGAAGCCGAGCTTCTCTCAACTGTACTCG
rJMSF034H14+ TTAGGCCCCCTTCACCAACGCCAGCACCTTCAGAAGCCGAGCTTCTCTCAACTGTACTCG
JMFN020E21- TTAGGCCCCCTTCACCAACGCCAGCACCTTCAGAAGCCGAGCTTCTCTCAACTGTACTCG
rJMSF012N01+ TTAGGCCCCCTTCACCAACGCCAGCACCTTCAGAAGCCGAGCTTCTCTCAACTGTACTCG
____________________________________________________________
consensus TTAGGCCCCCTTCACCAACGCCAGCACCTTCAGAAGCCGAGCTTCTCTCAACTGTACTCG
. : . : . : . : . : . :
rJMSF026L21+ GGAAATTACATGAACTTGAAGAGAAAGTGAATGTGCTTCAAGAAAAGCCATCCAAGATGC
rJMSF034H14+ GGAAATTACATGAACTTGAAGAGAAAGTGAATGTGCTTCAAGAAAAGCCATCCAAGATGC
rJMFF011G24+ AGCCATCCAAGATGC
JMFN020E21- GGAAATTACATGAACTTGAAGAGAAAGTGAATGTGCTTCAAGAAAAGCCATCCAAGATGC
rJMSF012N01+ GGAAATTACATGAACTTGAAGAGAAAGTGAATGTGCTTCAAGAAAAGCCATCCAAGATGC
____________________________________________________________
consensus GGAAATTACATGAACTTGAAGAGAAAGTGAATGTGCTTCAAGAAAAGCCATCCAAGATGC
. : . : . : . : . : . :
rJMSF026L21+ CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCCTTGAGGCCG
rJMSF034H14+ CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCCTTGAGGCCG
rJMFF011G24+ CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCNTTGAGNCNG
JMFN020E21- CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCCTTGAGGCCG
rJMSF012N01+ CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCCTTGAGGCCG
____________________________________________________________
consensus CCTATGAAAAAGAGGAATTACTAAATGCTGCAGTTTGCCGAGTGGATGGCCTTGAGGCCG
. : . : . : . : . : . :
rJMSF026L21+ AGTTAATTGCAACCAAGAAGGCTCTGCACGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
rJMSF034H14+ AGTTAATTGCAACCAAGAAGGCTCTGCACGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
rJMFF011G24+ AGTTAATTGCAACCAAGAAGGCTCTNCATGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
JMFN020E21- AGTTAATTGCAACCAAGAAGGCTCTGCACGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
rJMSF012N01+ AGTTAATTGCAACCAAGAAGGCTCTGCACGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
____________________________________________________________
consensus AGTTAATTGCAACCAAGAAGGCTCTGCACGAAGCTTTGATGAGGCAAGAGGAACTTCTTG
. : . : . : . : . : . :
rJMSF026L21+ CATACATCGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTCTGCCTGTAAGGTC
rJMSF034H14+ CATACATCGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTCTGCCTGTAAGGTC
rJMFF011G24+ CATACATNGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTGTGCCTGTAAGGTC
JMFN020E21- CATACATCGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTCTGCCTGTAAGGTC
rJMSF012N01+ CATACATCGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTCTGCCTGTAAGGTC
____________________________________________________________
consensus CATACATCGACAGACAAGAAGATGCCAAGTTTCGGAAAAAGAAATTCTGCCTGTAAGGTC
. : . : . : . : . : . :
rJMSF026L21+ TTCCTCCAACTCTTCCATCATGCAAGAACTGTTCTTGATGAGATTCTCTTTGGTGTGATG
rJMSF034H14+ TTCCTCCAACTCTTCCATCATGCAAGAACTGTTCTNGATGAGATTCTCTTTGGTGTGATG
rJMFF011G24+ TTCCTCCNACTNTTCCATCATGCAAGAACTGTTCTTGATGAGATTCTCTTTGGTGTGATG
JMFN020E21- TTCCTCCAACTCTTCCATCATGCAAGAACTGTTCTTGATGAGATTCTCTTTGGTGTGATG
rJMSF012N01+ TTCCTCCAACTCTTCCATCATGCAAGAACTGTTCTTGATGAGATTCTCTTTGGTGTGATG
____________________________________________________________
consensus TTCCTCCAACTCTTCCATCATGCAAGAACTGTTCTTGATGAGATTCTCTTTGGTGTGATG
. : . : . : . : . : . :
rJMSF026L21+ CTCATATATGTTTGTAATTTTGTTGTGTTTGTTGCTTCCATTCATATCTGTAATGCAAGT
rJMSF034H14+ CTCATATATGTTTGTAATTTTGTTGTGTTNGTTGCTTCCATTCATATCTGTAATGCAAGT
rJMFF011G24+ NTCATATATGTTTGTAANCTTGTTGTGTTTGTTGCTTCCATTCATATCTGNAATGCAAGT
JMFN020E21- CTCATATATGTTTGTAATTTTGTTGTGTTTGTTGCTTCCATTCATATCTGTAATGCAAGT
rJMSF012N01+ CTCATATATGTTTGTAATTTTGTTGTGTTTGTTGCTTCCATTCATATCTGTAATGCAAGT
____________________________________________________________
consensus CTCATATATGTTTGTAATTTTGTTGTGTTTGTTGCTTCCATTCATATCTGTAATGCAAGT
. : . : . : . : . : . :
rJMSF026L21+ TTGGTGTGTGGTGATCATGCAA
rJMSF034H14+ TTGGTGTGTGGTGATCATGCAAC
rJMFF011G24+ NTGGTGTGTGGTGATCA
JMFN020E21- TTGGTGTGTGGTGATCATGCAAC
rJMSF012N01+ TTGGTGTGTGGTGATCATGCAACCAATGTTAACCTTATATGTGCAGACAACATCCAACTT
____________________________________________________________
consensus TTGGTGTGTGGTGATCATGCAACCAATGTTAACCTTATATGTGCAGACAACATCCAACTT