Contig 008460:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF010J13Sequence449010605 (3)760008460 (3)ref|XP_011095886.1|1e-53PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum
JMSF013N21Sequence493010605 (3)751008460 (3)ref|XP_011095886.1|9e-56PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum
JMSF023P08Sequence652010605 (3)757008460 (3)ref|XP_011095886.1|9e-49PREDICTED: C2 and GRAM domain-containing protein At1g03370 isoform X2 [Sesamum

Alignment

This contig is upended


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rJMSF013N21+                                                            TTACCAAAGG
rJMSF023P08+                          TTGCCTAGTAGTTGGAATCGGAAAAGACTGATGTTTACCAAAGG
rJMSF010J13+                                                            TTACCAAAGG
                      ____________________________________________________________
consensus                             TTGCCTAGTAGTTGGAATCGGAAAAGACTGATGTTTACCAAAGG
 
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rJMSF013N21+          CAACTTTATTACAAA-TTCGATAAGCGTATATCAAGTTATGGAGGCGAGGTCACTAGCAC
rJMSF023P08+          CAACTTTATTACAAANTTCGATAAGCGTATATCAAGTTATGGAGGCGAGGTCACTAGCAC
rJMSF010J13+          CAACTTTATTACAAA-TTCGATAAGCGTATATCAAGTTATGGAGGCGAGGTCACTAGCAC
                      ____________________________________________________________
consensus             CAACTTTATTACAAA-TTCGATAAGCGTATATCAAGTTATGGAGGCGAGGTCACTAGCAC
 
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rJMSF013N21+          ACAGCAGAAATCTCACCTTCCCGAGAAAAATGGTTGGCTCCTAGAAGAGGTGATGACACT
rJMSF023P08+          ACAGCAGAAATCTCACCTTCCCGAGAAAAATGGTTGGCTCCTAGAAGAGGTGATGACACT
rJMSF010J13+          ACAGCAGAAATCTCACCTTCCCGAGAAAAATGGTTGGCTCCTAGAAGAGGTGATGACACT
                      ____________________________________________________________
consensus             ACAGCAGAAATCTCACCTTCCCGAGAAAAATGGTTGGCTCCTAGAAGAGGTGATGACACT
 
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rJMSF013N21+          TCACGGGGTTCCACTTGGCGACTATTTCACTCTTCATTTGAAATATCAGGTCGAGGATGT
rJMSF023P08+          TCACGGGGTTCCACTTGGCGACTATTTCACTCTTCATTTGAAATATCAGGTCGAGGATGT
rJMSF010J13+          TCACGGGGTTCCACTTGGCGACTATTTCACTCTTCATTTGAAATATCAGGTCGAGGATGT
                      ____________________________________________________________
consensus             TCACGGGGTTCCACTTGGCGACTATTTCACTCTTCATTTGAAATATCAGGTCGAGGATGT
 
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rJMSF013N21+          ACCCTTGAGATCATCAATATGCAGTGTTAACGTACAGTTTGGGGTGTCGTGGTTGAAATA
rJMSF023P08+          ACCCTTGAGATCATCAATATGCAGTGTTAACGTACAGTTTGGGGTGTCGTGGTTGAAATA
rJMSF010J13+          ACCCTTGAGATCATCAATATGCAGTGTTAACGTACAGTTTGGGGTGTCGTGGTTGAAATA
                      ____________________________________________________________
consensus             ACCCTTGAGATCATCAATATGCAGTGTTAACGTACAGTTTGGGGTGTCGTGGTTGAAATA
 
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rJMSF013N21+          TACCAAACATCAGAAACGGATCACGAAAAACATCGTTTCCAATCTGCAAGAGCGTCTCTC
rJMSF023P08+          TACCAAACATCAGAAACGGATCACGAAAAACATCGTTTCCAATCTGCAAGAGCGTCTCTC
rJMSF010J13+          TACCAAACATCAGAAACGGATCACGAAAAACATCGTTTCCAATCTGCAAGAGCGTCTCTC
                      ____________________________________________________________
consensus             TACCAAACATCAGAAACGGATCACGAAAAACATCGTTTCCAATCTGCAAGAGCGTCTCTC
 
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rJMSF013N21+          GGTGATGTTTAGTGAACTAGAGAAGGAATTTTGCTCGCGGAAGTAGAAGATGTTTCATAC
rJMSF023P08+          GGTGATGTTTAGTGAACTAGAGAAGGAATTTTGCTCGCGGAAGTAGAAGATGTTTCATAC
rJMSF010J13+          GGTGATGTTTAGTGAACTAGAGAAGGAATTTTGCTCGCGGAAGTAGAAGATGTTTCATAC
                      ____________________________________________________________
consensus             GGTGATGTTTAGTGAACTAGAGAAGGAATTTTGCTCGCGGAAGTAGAAGATGTTTCATAC
 
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rJMSF013N21+          ACCGTGGCTATTTGTAAATTTAATCGGGTATGCAATTCCCCAACATTCTTTCCCGTTTAA
rJMSF023P08+          ACCGTGGCTATTTGTAAATTTAATCGGGTATGCAATTCCCCAACATTCTTTCCCGTTTAA
rJMSF010J13+          ACCGTGGCTATTTGTAAATTTAATCGGGTATGCAATTCCCCAACATTCTTTCCCGTTTAA
                      ____________________________________________________________
consensus             ACCGTGGCTATTTGTAAATTTAATCGGGTATGCAATTCCCCAACATTCTTTCCCGTTTAA
 
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rJMSF013N21+          CATTTGACTGATGAAGCAAGGAACGGAACTGGAATGTTCGGTTTTTCACCGGATTTCCAT
rJMSF023P08+          CATTTGACTGATGAAGCAAGGAACGGAACTGGAATGTTCGGTTTTTCACCGGATTTCCAT
rJMSF010J13+          CATTTGACTGATGAAGCAAGGAACGGAACTGGAATGTTCGGTTTTTCACCGGATTTCCAT
                      ____________________________________________________________
consensus             CATTTGACTGATGAAGCAAGGAACGGAACTGGAATGTTCGGTTTTTCACCGGATTTCCAT
 
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rJMSF013N21+          TTGAGAGACTATCACATTGTATAGCTGCTCGATCGAGGCGACTTGGATTTATGTACTCAT
rJMSF023P08+          TTGAGAGACTATCACATTGTATAGCTGCTCGATCGAGGCGACTTGGATTTATGTACTCAT
rJMSF010J13+          TTGAGAGACTATCACATTGTATAGCTGCTCGATCGAGGCGACTTGGATTTATGTACTCAT
                      ____________________________________________________________
consensus             TTGAGAGACTATCACATTGTATAGCTGCTCGATCGAGGCGACTTGGATTTATGTACTCAT
 
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rJMSF013N21+          ATTTATAGCAGAGATGTAGGCAGGAAGGTTGAGAAAATGTGATTGATAATCTGCAACCCT
rJMSF023P08+          ATTTATAGCAGAGATGTAGGCAGGAAGGTTGAGAAAATGTGATTGATAATCTGCAACCCT
rJMSF010J13+          ATTTATAGCAGAGATGTAGGCAGGAAGGTTGAGAAAATGTGATTGATAATCTGCAACCCT
                      ____________________________________________________________
consensus             ATTTATAGCAGAGATGTAGGCAGGAAGGTTGAGAAAATGTGATTGATAATCTGCAACCCT
 
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rJMSF013N21+          TTTTTTGGCAGATCTCAGCAGTTAAATTTGATTTCTTAATTCAATTATGATACAATAGAA
rJMSF023P08+          TTTTTTGGCAGATCTCAGCAGTTAAATTTGATTTCTTAATTCAATTATGATACAATAGAA
rJMSF010J13+          TTTTTTGGCAGATCTCAGCAGTTAAATTTGATTTCTTAATTCAATTATGATACAATAGAA
                      ____________________________________________________________
consensus             TTTTTTGGCAGATCTCAGCAGTTAAATTTGATTTCTTAATTCAATTATGATACAATAGAA
 
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rJMSF013N21+          TAGGTAGAAGTATTAGATTATAGTGTCATGAC                            
rJMSF023P08+          TAGGTAGAAGTATTAGATTATAGTGTCATGACAGGAAACTTTTTGTATGCATG       
rJMSF010J13+          TAGGTAGAAGTATTAGATTATAGTGTCATGACAGGAAACCTTTTGTATGCATGAAAAATA
                      ____________________________________________________________
consensus             TAGGTAGAAGTATTAGATTATAGTGTCATGACAGGAAACTTTTTGTATGCATGAAAAATA