Contig 008455:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005I22Sequence342022024324008455 (2)ref|XP_002263023.2|102PREDICTED: uncharacterized protein LOC100243690 [Vitis vinifera] emb|CBI38263.3|
JMSF009O05Sequence282022053726008455 (2)ref|XP_007037040.1|4e-43Uncharacterized protein isoform 1 [Theobroma cacao] gb|EOY21541.1| Uncharacteriz

Alignment

This contig is upended


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rJMSF009O05+                                                                GGGCAG
                      ____________________________________________________________
consensus                                                                   GGGCAG
 
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rJMSF009O05+          CCTGGCACAATGATACTAAGGGGTTTATTTTCTTTTCATTTGCCATTTGATTTTCTCATG
                      ____________________________________________________________
consensus             CCTGGCACAATGATACTAAGGGGTTTATTTTCTTTTCATTTGCCATTTGATTTTCTCATG
 
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rJMSF009O05+          CCCATGTCTGGTTTTATGTAATGTACTTTTTATGATTTAGGGCGGTGGGATGCTAACATT
                      ____________________________________________________________
consensus             CCCATGTCTGGTTTTATGTAATGTACTTTTTATGATTTAGGGCGGTGGGATGCTAACATT
 
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rJMSF009O05+          AGGGGGAATCTACAAATTGTTAACTAAGAGATTATTTGGAAAATGTATGGTGGAAGTTGC
                      ____________________________________________________________
consensus             AGGGGGAATCTACAAATTGTTAACTAAGAGATTATTTGGAAAATGTATGGTGGAAGTTGC
 
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rJMSF009O05+          CAAATATGGGGTGCAAAAGGAACTCCTCAAGAAGGGTGGAGAATTGGCAGCTGTTAACCT
                      ____________________________________________________________
consensus             CAAATATGGGGTGCAAAAGGAACTCCTCAAGAAGGGTGGAGAATTGGCAGCTGTTAACCT
 
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rJMSF005I22+                           ACCTTGTTGCAAAACAGGGTGTTAAAGGTGCTGCTACTAGGTA
rJMSF009O05+          GGAGGCCAGGCTAGCCTACCTTGTTGCAAAACAGGGTGTTAAAGGTGCTGCTACTAGGTA
                      ____________________________________________________________
consensus             GGAGGCCAGGCTAGCCTACCTTGTTGCAAAACAGGGTGTTAAAGGTGCTGCTACTAGGTA
 
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rJMSF005I22+          CTTNGGCCTGAGGAGCTNGNCAACATTTTTTGGTCCATTGTTGNGGGGAACATTTCTAGC
rJMSF009O05+          CTTGGGCCTGAGGAGCTTGGCAACATTTTTTGGTCCATTGTTGTGGGGAACATTTCTAGC
                      ____________________________________________________________
consensus             CTTGGGCCTGAGGAGCTTGGCAACATTTTTTGGTCCATTGTTGTGGGGAACATTTCTAGC
 
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rJMSF005I22+          AGATGTTTTTATTCAAATGCTTGGAACAGATTACNCTAGAATTNTGCGAGCTANTTATGC
rJMSF009O05+          AGATGTTTTTATTCAAATGCTTGGAACAGATTACGCTAGAATTGTGCGAGCTATTTATGC
                      ____________________________________________________________
consensus             AGATGTTTTTATTCAAATGCTTGGAACAGATTACGCTAGAATTGTGCGAGCTATTTATGC
 
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rJMSF005I22+          CTTTGCACAGATCCGGATCACCCGTTCATACAAGTTANGGTCNCATTTCAAGTAAGAGAT
rJMSF009O05+          CTTTGCACAGATCCGGATCACCCGTTCATACAAGTTATGATCTCATTTCAAGTAAGAGAT
                      ____________________________________________________________
consensus             CTTTGCACAGATCCGGATCACCCGTTCATACAAGTTATGGTCTCATTTCAAGTAAGAGAT
 
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rJMSF005I22+          GATTNGANNNTCTAATGCGTAGCTTCATGTAGTGTGGAAATGGAATATTATATCTGGAAC
rJMSF009O05+          GATTTGAGTTTCTAATGCGTAGCTTCATGTAGTGTGGAAATGGAATATTATATCTGGAAC
                      ____________________________________________________________
consensus             GATTTGAGTTTCTAATGCGTAGCTTCATGTAGTGTGGAAATGGAATATTATATCTGGAAC
 
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rJMSF005I22+          TGTGNTTTTGGGTTTGGTTGGAAGGAAGTATTCGCCAAATC                   
rJMSF009O05+          TGTGTTTTTGGGTTTGGTTGGAAGGAAGTATTCGCCAAATCTGTCCAAATTTTTAGGGTT
                      ____________________________________________________________
consensus             TGTGTTTTTGGGTTTGGTTGGAAGGAAGTATTCGCCAAATCTGTCCAAATTTTTAGGGTT
 
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rJMSF009O05+          TCAATGCTAAGTTGAGGGTTTGTTTTTTACTGTCATAGTGTCATTGAACTCTTACTCTAG
                      ____________________________________________________________
consensus             TCAATGCTAAGTTGAGGGTTTGTTTTTTACTGTCATAGTGTCATTGAACTCTTACTCTAG
 
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rJMSF009O05+          GATATGAGGTTCTTGTAAATATGCACCACAAAAGCAATTGCCTTTACTTCTCTTTTTTAT
                      ____________________________________________________________
consensus             GATATGAGGTTCTTGTAAATATGCACCACAAAAGCAATTGCCTTTACTTCTCTTTTTTAT