| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF005A10 | Sequence | 257 | 002235 (8) | 278 | 008436 (6) | ||||||
| JMSF005C12 | Sequence | 279 | 009188 (10) | ref|XP_009624787.1| | 3e-06 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 391 | 008436 (6) | |||
| JMSF007H14 | Sequence | 279 | 006394 (5) | 750 | 008436 (6) | ||||||
| JMSF030M22 | Sequence | 618 | 009188 (10) | ref|XP_009624787.1| | 2e-27 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 607 | 008436 (6) | ref|XP_011070823.1| | 1e-06 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
| JMSF038C24 | Sequence | 673 | 009188 (10) | ref|XP_009624787.1| | 9e-36 | PREDICTED: putative late blight resistance protein homolog R1A-3 [Nicotiana tom | 843 | 008436 (6) | ref|XP_011070823.1| | 6e-27 | PREDICTED: putative late blight resistance protein homolog R1B-17 [Sesamum indi |
| JMSF045O09 | Sequence | 712 | 009188 (10) | ref|XP_006359790.1| | 1e-62 | PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum | 594 | 008436 (6) | gb|AGX27500.1| | 9e-07 | NBS-LRR class resistance protein Fy2-Ry2 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF038C24+ TCGAGTGGA
____________________________________________________________
consensus TCGAGTGGA
. : . : . : . : . : . :
rJMSF038C24+ AGGAACTTGAGTGCTTTGGGGGTCGTTGGATGAGCTCGAGGTGTTAAAGCTGGAGGACAA
____________________________________________________________
consensus AGGAACTTGAGTGCTTTGGGGGTCGTTGGATGAGCTCGAGGTGTTAAAGCTGGAGGACAA
. : . : . : . : . : . :
rJMSF038C24+ TGCGTTTAGAGGAGAGTTCTGTGATGTAAGGAGCGTTGTGTTCAAACAACTGCAGTATTT
____________________________________________________________
consensus TGCGTTTAGAGGAGAGTTCTGTGATGTAAGGAGCGTTGTGTTCAAACAACTGCAGTATTT
. : . : . : . : . : . :
rJMSF038C24+ TCGCATCGAAAGGACTGATTTAGTATCATGGACAGCTTCGAAAGATAGTTTTCCAGTACT
____________________________________________________________
consensus TCGCATCGAAAGGACTGATTTAGTATCATGGACAGCTTCGAAAGATAGTTTTCCAGTACT
. : . : . : . : . : . :
rJMSF030M22+ GTTGAGTTTGGTGA
rJMSF045O09+ CCGGTTGAGTTTGGTGA
rJMSF038C24+ AAAATGTCTGTTGCTCAGAAACTGCACTAAGCTTGATTCTGTTCCGGTTGAGTTTGGTGA
____________________________________________________________
consensus AAAATGTCTGTTGCTCAGAAACTGCACTAAGCTTGATTCTGTTCCGGTTGAGTTTGGTGA
. : . : . : . : . : . :
rJMSF030M22+ AATAGAGAGCCTTAAGTTGTTGGAATTGTATTGCACCAACAAGGGGGCAGTGAATTCTGC
rJMSF045O09+ AATAGAGAGCCTTAAGTTGTTGGAATTGTATTGCACCAACAAGGGGGCAGTGAATTCTGC
rJMSF038C24+ AATAGAGAGCCTTAAGTTGTTGGAATTGTATTGCACCAACAAGGGGGCAGTGAATTCTGC
____________________________________________________________
consensus AATAGAGAGCCTTAAGTTGTTGGAATTGTATTGCACCAACAAGGGGGCAGTGAATTCTGC
. : . : . : . : . : . :
rJMSF030M22+ TAAAAAAATACAGGAGCTGAAAAGAGGTGTAAATGGAGATACAAAAAAGGGTGGATTTCA
rJMSF045O09+ TAAAAAAATACAGGAGCTGAAAAGAGGTGTAAATGGAGATACAAAAAAGGGTGGATTTCA
rJMSF038C24+ TAAAAAAATACAGGAGCTGAAAAGAGGTGTAAATGGAGATACAAAAAAGGGTGGATTTCA
____________________________________________________________
consensus TAAAAAAATACAGGAGCTGAAAAGAGGTGTAAATGGAGATACAAAAAAGGGTGGATTTCA
. : . : . : . : . : . :
rJMSF005C12+ GGAGGTAATGCCAAGTTGTC
rJMSF005A10+ GGAGGTAATGCCAAGTTGTC
rJMSF030M22+ GCTCTCTGTCTATCCTCCTGAGCAGTGAGGTTTCCGTGGAGGAGGTAATGGCAAGTTGTC
rJMSF045O09+ GCTCTCTGTCTATCCTCCTGAGCAGTGAGGTTTCCGTGGAGGAGGTAATGGCAAGTTGTC
rJMSF038C24+ GCTCTCTGTCTATCCTCCTGAGCAGTGAGGTTTCCGTGGAGGAGGTAATGGCAAGTTGTC
____________________________________________________________
consensus GCTCTCTGTCTATCCTCCTGAGCAGTGAGGTTTCCGTGGAGGAGGTAATGGCAAGTTGTC
. : . : . : . : . : . :
rJMSF005C12+ CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATCTGATCAGTCAAGGTCTCTTGTTA
rJMSF005A10+ CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATCTGATCAGTCAAGGTCTCTTGNTA
rJMSF030M22+ CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATCTGATCAGTCAAGGTCTCTTGTTA
rJMSF045O09+ CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATC--ATCAGTCAAGGTCTCTTGTTA
rJMSF038C24+ CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATCTGATCAGTCAAGGTCTCTTGTTA
____________________________________________________________
consensus CCATCAGTCCTTATTGTAAAAAGGGTTTCATCGCATCTGATCAGTCAAGGTCTCTTGTTA
. : . : . : . : . : . :
rJMSF005C12+ CAGTTCGAGCAAAGTTGTAAGGTGATCAGTNGAATCAATTGAGCTAGCTAGCAAGGCTTG
rJMSF005A10+ CAGTNCGAGCAAAGTTTTAAGGTGATCAGTTGAATCAATTGAGCTAGCTAGCAAGGCTTG
rJMSF030M22+ CAGTTCGAGCAAAGTTTTAAGGTGATCAGTTGAATCAATTGAGCTAGCTAGCAAGGCTTG
rJMSF045O09+ CAGTTCGAGCAAAGTTTTAAGGTGATCAGTTGAATCAATTGAGCTAGCTAGCAAGGCTTG
rJMSF038C24+ CAGTTCGAGCAAAGTTTTAAGGTGATCAGTTGAATCAATTGAGCTAGCTAGCAAGGCTTG
____________________________________________________________
consensus CAGTTCGAGCAAAGTTTTAAGGTGATCAGTTGAATCAATTGAGCTAGCTAGCAAGGCTTG
. : . : . : . : . : . :
rJMSF005C12+ ATTGGTCAATTTATGGATGGCNTTNTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
rJMSF005A10+ ATTGGTCAATTTATGGATGGCTTTCTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
rJMSF030M22+ ATTGGTCAATTTATGGATGGCTTTCTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
rJMSF045O09+ ATTGGTCAATTTATGGATGGCTTTCTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
rJMSF038C24+ ATTGGTCAATTTATGGATGGCTTTCTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
rJMSF007H14+ CAATTTATGGATGACTTTCTGATTGTGATTTCTACAAAATGCTGAAATAAGTGG
____________________________________________________________
consensus ATTGGTCAATTTATGGATGGCTTTCTGATTGTGATTTCTACCAAATGGTGAAATAAGTGG
. : . : . : . : . : . :
rJMSF005C12+ GCAACGCGAATTTGTTCCGACCATTCCATTCACTGTACCTGCTTGCCAATTTGTGTGCAG
rJMSF005A10+ GCAACGCGAATTNGTTCCGACCATTCCATTCACNGTACCTGCTTGCCAATTTGTGTGCAN
rJMSF030M22+ GCAACGCGAATTTGTTCCGACCATTCCATTCACTGTACCTGCTTGCCAATTTGTGTGCAG
rJMSF045O09+ GCAACGCGAATTTGTTCCGACCATTCCATTCACTGTACCTGCTTGCCAATTTGTGTGCAG
rJMSF038C24+ GCAACGCGAATTTGTTCCGACCATTCCATTCACTGTACCTGCTTGCCAATTTGTGTGCAG
rJMSF007H14+ GCAACACAAATTTGTTCCGACCATTCCATTCAACGTACCTGCTTTCCAATTTGTGTGCAG
____________________________________________________________
consensus GCAACGCGAATTTGTTCCGACCATTCCATTCACTGTACCTGCTTGCCAATTTGTGTGCAG
. : . : . : . : . : . :
rJMSF005C12+ ACTGCATATTCTTGTTACTGTCTTGCGATTTGAGTTGGAGTNTGATTCGTTTGGTTNGTT
rJMSF005A10+ ACTGCATATTCTTGT
rJMSF030M22+ ACTGCATATTCTTGTTACTGTCTTGCGATTTGAGTTGGAGTTTGATTTGTTTGGTTTGTT
rJMSF045O09+ ACTGCATATTCTTGTTACTGTCTTGCGATTTGAGTTGGAGTTTGATTTGTTTGGTTTGTT
rJMSF038C24+ ACTGCATATTCTTGTTACTGTCTTGCGATTTGAGTTGGAGTTTGATTTGTTTGGTTTGTT
rJMSF007H14+ ATNGCATAT-----TTACNGTCTTGCTATTTGAGTTGGATTTTGATTTGGTTTGTTTGTT
____________________________________________________________
consensus ACTGCATATTCTTGTTACTGTCTTGCGATTTGAGTTGGAGTTTGATTTGTTTGGTTTGTT
. : . : . : . : . : . :
rJMSF005C12+ TTATCATGGTTGGNTGTTGTTCTTGGTNGTCNTGGCTTCTCATTGAATATTACTCTGNAA
rJMSF030M22+ TTATCATGGTTGGTTGTTGTT-TTGGTTGTCTTGGCTTCTCATTGAATATTACTCTGTAA
rJMSF045O09+ TTATCATGGTTGGTTGTTGTT-TTGGTTGTCTTGGCTTCTCATTGAATATTACTCTGTAA
rJMSF038C24+ TTATCATGGTTGGTTGTTGTT-TTGGTTGTCTTGGCTTCTCATTGAATATTACTCTGTAA
rJMSF007H14+ TTATCATGGCTGGTTGTTGTT-TTGGTTGTCTTGGCTTCTCATTGAATATTACTCTGTAA
____________________________________________________________
consensus TTATCATGGTTGGTTGTTGTT-TTGGTTGTCTTGGCTTCTCATTGAATATTACTCTGTAA
. : . : . : . : . : . :
rJMSF005C12+ ACA-CTCATT
rJMSF030M22+ ACA-CTCATTTNGGTGCTTTAAAATAAAATAC
rJMSF045O09+ ACA-CTCATTTTGGTGCTTTAAAATAAAATAC
rJMSF038C24+ ACACCTCATTTTGGTGCTTTAAAATAAAATAC
rJMSF007H14+ ACA-CTCATTTTGGTGCTTTAAAATAAAATACGGAGTAAATAAATGTTATTTAGTTATTT
____________________________________________________________
consensus ACA-CTCATTTTGGTGCTTTAAAATAAAATACGGAGTAAATAAATGTTATTTAGTTATTT
. : . : . : . : . : . :
rJMSF007H14+ CCAAAAATAAATGTTATTTAGTTTCTTATTTTAAATTTTTTTTAAAGGAATTTTTAAATT
____________________________________________________________
consensus CCAAAAATAAATGTTATTTAGTTTCTTATTTTAAATTTTTTTTAAAGGAATTTTTAAATT
. : . : . : . : . : . :
rJMSF007H14+ TTTTATTCATCTCTAAATTTATAGTCAAACTTGTATAAGATCATATCGGTTAGACAGAAT
____________________________________________________________
consensus TTTTATTCATCTCTAAATTTATAGTCAAACTTGTATAAGATCATATCGGTTAGACAGAAT
. : . : . : . : . : . :
rJMSF007H14+ TTAGAATAGTTGTTTGGTACTTTGGATAGAAGTCATAGTACTTAATACAGAAAATNTAAT
____________________________________________________________
consensus TTAGAATAGTTGTTTGGTACTTTGGATAGAAGTCATAGTACTTAATACAGAAAATNTAAT
. : . : . : . : . : . :
rJMSF007H14+ ACTAATTTGAATTAAACAAATTGTTACCTTATAATAGATATTGTAATATTTATATGCTAG
____________________________________________________________
consensus ACTAATTTGAATTAAACAAATTGTTACCTTATAATAGATATTGTAATATTTATATGCTAG