Contig 008435:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G01Sequence367022035ref|XP_010323234.1|9e-42PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [So762008435 (2)ref|XP_009608072.1|1e-126PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 iso
JMSF033K15Sequence100008435 (2)ref|XP_009608071.1|6e-05PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 iso

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF007G01+ ATCTTCACAAATGCTGCAAGCATCGGATAATCCATCGCGACA
                      ____________________________________________________________
consensus ATCTTCACAAATGCTGCAAGCATCGGATAATCCATCGCGACA
 
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rJMSF007G01+ TTAAAGCCTCCAATGTTCTCTTAGGTCCAGACTATGAACCCCAGATTTCAGATTTCGGGT
                      ____________________________________________________________
consensus TTAAAGCCTCCAATGTTCTCTTAGGTCCAGACTATGAACCCCAGATTTCAGATTTCGGGT
 
. : . : . : . : . : . :
rJMSF007G01+ TGGCGAAATGGCTGCCAAACAAATGGACACACCATGCTGTGATTCCAATTGAGGGTACAT
                      ____________________________________________________________
consensus TGGCGAAATGGCTGCCAAACAAATGGACACACCATGCTGTGATTCCAATTGAGGGTACAT
 
. : . : . : . : . : . :
rJMSF007G01+ TTGGGTACTTGGCTCCAGAGTATTTCATGTATGGAATTGTTGATGAGAAAATAGATGTTT
                      ____________________________________________________________
consensus TTGGGTACTTGGCTCCAGAGTATTTCATGTATGGAATTGTTGATGAGAAAATAGATGTTT
 
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rJMSF007G01+ TTGCATTTGGGATTCTTCTTCTTGAGATCATCACTGGCAGGAGGCCTGTTGATTCATCAA
                      ____________________________________________________________
consensus TTGCATTTGGGATTCTTCTTCTTGAGATCATCACTGGCAGGAGGCCTGTTGATTCATCAA
 
. : . : . : . : . : . :
rJMSF007G01+ GGCAAAACCTGCTTCTTTGGGCAAAGCCATTAATGGAAGGTGGGAAATTAGATGAGCTAG
                      ____________________________________________________________
consensus GGCAAAACCTGCTTCTTTGGGCAAAGCCATTAATGGAAGGTGGGAAATTAGATGAGCTAG
 
. : . : . : . : . : . :
rJMSF007G01+ CAGATCCAAGATTAGAAGGTGAGTATGAAATGGACCAACTACACAGGATAGTTCTAACTG
                      ____________________________________________________________
consensus CAGATCCAAGATTAGAAGGTGAGTATGAAATGGACCAACTACACAGGATAGTTCTAACTG
 
. : . : . : . : . : . :
rJMSF033K15+ CCAACCATGGCAGAGNCGTTAGACA
rJMSF007G01+ CTTCCTACTGCGTAAGGCAATCCTCAATGTGGCGCCCAACCATGACAGAGGTGTTAGACT
                      ____________________________________________________________
consensus CTTCCTACTGCGTAAGGCAATCCTCAATGTGGCGCCCAACCATGGCAGAGGTGTTAGACT
 
. : . : . : . : . : . :
rJMSF033K15+ TGTTCCGCTANGGAGANGATTCAGANGCAGCAAGAAGTTGGAGAATACCGAAGTTNGCAA
rJMSF007G01+ TGTTACGCTATGGAGATGATTCAGAGGCAGCAAGAAGTTGGAGAATACCGAAGTTTACAA
                      ____________________________________________________________
consensus TGTTCCGCTATGGAGATGATTCAGAGGCAGCAAGAAGTTGGAGAATACCGAAGTTTGCAA
 
. : . : . : . : . : . :
rJMSF033K15+ NTGATGAGATGGATG
rJMSF007G01+ GTGATGAGATGGATGACTGCTCTATGGTCTTTGGATATGACCTTCCCTCGGATTTAATAG
                      ____________________________________________________________
consensus GTGATGAGATGGATGACTGCTCTATGGTCTTTGGATATGACCTTCCCTCGGATTTAATAG
 
. : . : . : . : . : . :
rJMSF007G01+ TAGAGGACCTATATTAGGCTATCATTATTTTTATTTTATTCTTATTTTATTTTTGGCTTA
                      ____________________________________________________________
consensus TAGAGGACCTATATTAGGCTATCATTATTTTTATTTTATTCTTATTTTATTTTTGGCTTA
 
. : . : . : . : . : . :
rJMSF007G01+ CTTATAGTTCATTCTGATTATCATTATCATTATTATTAACATTTATATTTTATATTATAA
                      ____________________________________________________________
consensus CTTATAGTTCATTCTGATTATCATTATCATTATTATTAACATTTATATTTTATATTATAA
 
. : . : . : . : . : . :
rJMSF007G01+ TCTCCTTCTCAATATATAACCCAATGTTACTCTCTTTTATACCAATGTATGACCTAACAA
                      ____________________________________________________________
consensus TCTCCTTCTCAATATATAACCCAATGTTACTCTCTTTTATACCAATGTATGACCTAACAA