Contig 008420:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002I15Sequence326008420 (3)ref|XP_011089311.1|1e-36PREDICTED: serine/threonine-protein kinase GRIK2 [Sesamum indicum] ref|XP_011089783008420 (3)ref|XP_009791389.1|1e-55PREDICTED: serine/threonine-protein kinase GRIK2-like isoform X3 [Nicotiana syl
JMSF014B18Sequence173014617752008420 (3)emb|CBI16300.3|6e-67unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF002I15-                           AGCGGGTTGCCCCATCAGAGACTGCCATGAGTGATGTTCTTCGT
                      ____________________________________________________________
consensus                             AGCGGGTTGCCCCATCAGAGACTGCCATGAGTGATGTTCTTCGT
 
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JMSF002I15-           GAGGTTTTGATCATGAAAATCTAAGCCACCCCAATATAGTTCACCTCTTTGAGGTGATTG
                      ____________________________________________________________
consensus             GAGGTTTTGATCATGAAAATCTAAGCCACCCCAATATAGTTCACCTCTTTGAGGTGATTG
 
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JMSF002I15-           ATGACCCAAGAACCGATCACTTCTATATGGTTCTTGAATATGTGGAGGGCAAATGGGTCT
                      ____________________________________________________________
consensus             ATGACCCAAGAACCGATCACTTCTATATGGTTCTTGAATATGTGGAGGGCAAATGGGTCT
 
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JMSF002I15-           TCGAGGGTTCTGGTTCACCAGGTGGTGGTCTTGGAGAAGTCACTGCACGCAGATACCTGC
rJMSF014B18+                                     GTCTTGGAGAAGTCACTGCACGCAGATACCTGC
                      ____________________________________________________________
consensus             TCGAGGGTTCTGGTTCACCAGGTGGTGGTCTTGGAGAAGTCACTGCACGCAGATACCTGC
 
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JMSF002I15-           GGGATATAGTTTCTGGCTTAATGTATCTTCATTCTCATAATATAATACATGGGGATATTA
rJMSF014B18+          GGGATATAGTTTCTGGCTTAATGTATCTTCATTCTCATAATATAATACATGGGGATATTA
                      ____________________________________________________________
consensus             GGGATATAGTTTCTGGCTTAATGTATCTTCATTCTCATAATATAATACATGGGGATATTA
 
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JMSF002I15-           AACCTGATAATCTTTTAGTTTCTGCAACTGGCACAGTGAAGA                  
rJMSF014B18+          AACCTGATAATCTTTTAGTTTCTGCAACTGGCACAGTGAAGATTGCTGATTTTAGTGTCA
                      ____________________________________________________________
consensus             AACCTGATAATCTTTTAGTTTCTGCAACTGGCACAGTGAAGATTGCTGATTTTAGTGTCA
 
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rJMSF014B18+          GCCAGGCTTTTGAGAATGGTGACGATGAGCTCCGCCGGTCTCCTGGAACTCCTGTTTTCA
rJMSF002I15+                  TTTGAGAATGGNGACGATGAGCTCCGCCGGTCTCCTGGAACTCCTGTTTTCA
                      ____________________________________________________________
consensus             GCCAGGCTTTTGAGAATGGTGACGATGAGCTCCGCCGGTCTCCTGGAACTCCTGTTTTCA
 
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rJMSF014B18+          CTGCACCAGAGTGCTGCTTGGGTCTGACTTATCATGG-AAAGCTGCTGACACTTGGGCGG
rJMSF002I15+          CTGCACCAGAGTGCTGCTTGGGTCTGACTTATCATGGAAAAGCTGCTGACACTTGGGCGG
                      ____________________________________________________________
consensus             CTGCACCAGAGTGCTGCTTGGGTCTGACTTATCATGGAAAAGCTGCTGACACTTGGGCGG
 
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rJMSF014B18+          TTGGTGTGACCCTATATTGCATGGTTTTGGGAAAATATCCATTTCTTGGAGACACGCTTC
rJMSF002I15+          TTGGTGTGACCCTATATTGCATGGTTTTGGGAAAATATCCATTTCTTGGAGACACGCTTC
                      ____________________________________________________________
consensus             TTGGTGTGACCCTATATTGCATGGTTTTGGGAAAATATCCATTTCTTGGAGACACGCTTC
 
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rJMSF014B18+          AGGACACATATGATAAGATAGTAAACGACCCTCTTTGCCTTCCTGACGATTTAAATCCTC
rJMSF002I15+          AGGACACATATGATAAGATAGTAAACGACCCTCTTTGCCTTCCTGACGATTTAAATCCTC
                      ____________________________________________________________
consensus             AGGACACATATGATAAGATAGTAAACGACCCTCTTTGCCTTCCTGACGATTTAAATCCTC
 
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rJMSF014B18+          CTCTAAAGAATTTGCTTGAAGGGATTCTCTGTAAAGATCCTAGGCAAAGGTTGAGTCTCC
rJMSF002I15+          CTCTAAAGAATTTGCTTGAAGGGATTCTCTGTAAAGATCCTAGGCAAAGGTTGAGTCTCC
                      ____________________________________________________________
consensus             CTCTAAAGAATTTGCTTGAAGGGATTCTCTGTAAAGATCCTAGGCAAAGGTTGAGTCTCC
 
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rJMSF014B18+          GGGATGTATCAGAACACGAGTGGGTCATCGGAGATCACGGATCCATACCTCAGTATGATT
rJMSF002I15+          GGGATGTATCAGAACACGAGTGGGTCATCGGAGATCACGGATCCATACCTCAGTATGATT
                      ____________________________________________________________
consensus             GGGATGTATCAGAACACGAGTGGGTCATCGGAGATCACGGATCCATACCTCAGTATGATT
 
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rJMSF014B18+          GCTGGTGCCAGAGAATGAAACTGCAAATGGACGCGTAATGGCCACTTGGCGGATACACTC
rJMSF002I15+          GCTGGTGCCAGAGAATGAAACTGCAAATGGACGCGTAATGGCCACTTGGCGGATACACTC
                      ____________________________________________________________
consensus             GCTGGTGCCAGAGAATGAAACTGCAAATGGACGCGTAATGGCCACTTGGCGGATACACTC
 
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rJMSF014B18+          TCACTCTCACTTTCACTTGATGCTAACAGAATGAATTTTATTGTACACTTGTTTATTTGT
rJMSF002I15+          TCACTCTCACTTTCACTTGATGCTAACAGAATGAATTTTATTGTACACTTGTTTATTTGT
                      ____________________________________________________________
consensus             TCACTCTCACTTTCACTTGATGCTAACAGAATGAATTTTATTGTACACTTGTTTATTTGT
 
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rJMSF014B18+          GTCCAGTTTGCTGTCATGTTTAAAGAATGATAACTAG---GAGGAGGGGGTGTTGTTTTG
rJMSF002I15+          GTCCAGTTTGCTGTCATGTTTAAAGAATGATAACTAGGAAGAGGAGGGGGTGTTGTTTTG
                      ____________________________________________________________
consensus             GTCCAGTTTGCTGTCATGTTTAAAGAATGATAACTAGGAAGAGGAGGGGGTGTTGTTTTG
 
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rJMSF014B18+          CTGAGGAAACTGAACAACAAGGCAAGCTTATGTAAGTAAACACACATATGAGAGGGCTCC
rJMSF002I15+          CTGAGGAAACTGAACAACAAGGCAAGCTTATGTAAGTAAACACACATATGAGAGGGCTCC
                      ____________________________________________________________
consensus             CTGAGGAAACTGAACAACAAGGCAAGCTTATGTAAGTAAACACACATATGAGAGGGCTCC
 
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rJMSF014B18+          ACT                                                         
rJMSF002I15+          ACTTTGTAGCTAAATCAAAATCCCTAAATACTGGTCGGTCTTGAAGTCATTTTGTTCTTC
                      ____________________________________________________________
consensus             ACTTTGTAGCTAAATCAAAATCCCTAAATACTGGTCGGTCTTGAAGTCATTTTGTTCTTC
 
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rJMSF002I15+          TGGAAATACCAAAACTCCACAGCATAATTCTTGGTGCTCTATAAGACACTACGAAGATGC
                      ____________________________________________________________
consensus             TGGAAATACCAAAACTCCACAGCATAATTCTTGGTGCTCTATAAGACACTACGAAGATGC
 
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rJMSF002I15+          TGCTCTTTGCTTTTGTTTCATCTTATGTTTTTATTATATAAATTGCTCATTGGTTGAAAA
                      ____________________________________________________________
consensus             TGCTCTTTGCTTTTGTTTCATCTTATGTTTTTATTATATAAATTGCTCATTGGTTGAAAA