Contig 008403:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J18Sequence555012181 (7)gb|ACY78680.1|6e-38calcium-dependent protein kinase 1 [Panax ginseng]657008403 (10)ref|XP_009627158.1|2e-65PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMFF010P04Sequence548008403 (10)ref|XP_009627158.1|3e-25PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]364008403 (10)
JMFF013I16Sequence556012181 (7)gb|ACY78680.1|2e-35calcium-dependent protein kinase 1 [Panax ginseng]824008403 (10)ref|XP_009627158.1|2e-101PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMFF015K02Sequence615012181 (7)gb|ACY78680.1|3e-49calcium-dependent protein kinase 1 [Panax ginseng]634008403 (10)ref|XP_009627158.1|2e-64PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMFF049D16Sequence631012181 (7)gb|ACY78680.1|1e-43calcium-dependent protein kinase 1 [Panax ginseng]543008403 (10)ref|XP_009627158.1|4e-27PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMFF051E05Sequence590012181 (7)ref|XP_011086186.1|2e-31PREDICTED: calcium-dependent protein kinase-like [Sesamum indicum]626008403 (10)ref|XP_009627158.1|1e-36PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMFS123C08Sequence519008403 (10)ref|XP_009627158.1|3e-31PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMSF029P16Sequence611012181 (7)gb|ACY78680.1|4e-33calcium-dependent protein kinase 1 [Panax ginseng]795008403 (10)ref|XP_009627158.1|6e-110PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]
JMSF048O06Sequence706012181 (7)gb|ACY78680.1|6e-53calcium-dependent protein kinase 1 [Panax ginseng]744008403 (10)ref|XP_009627158.1|2e-82PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF029P16+                                        CCAATTGACAGTGCCGTACTTTCGAGGATG
                      ____________________________________________________________
consensus                                           CCAATTGACAGTGCCGTACTTTCGAGGATG
 
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rJMSF029P16+          NAGCAGTTTAGGNCAATGAATAAGCTCCAGCAACCTGCACTGAAGGTCATTGCTGAAAAC
rJMFF013I16+                       CAATGAATAAGCTCAAGCAACTTGCACTGAAGGTCATTGCTGAAAAC
                      ____________________________________________________________
consensus             NAGCAGTTTAGGNCAATGAATAAGCTCCAGCAACTTGCACTGAAGGTCATTGCTGAAAAC
 
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rJMSF029P16+          TTGTCTGAAGAAGAAATAAAAGGTCTTAAAGCGATGTTTGCAAACATGGATACGGACAAT
rJMFF013I16+          TTGTCTGAAGAAGAAATAAAAGGTCTTAAAGCGATGTTTGCAAACATGGATACGGACAAT
rJMSF048O06+                                       AGCGATGTTTGCAAACATGGATACGGACCAT
                      ____________________________________________________________
consensus             TTGTCTGAAGAAGAAATAAAAGGTCTTAAAGCGATGTTTGCAAACATGGATACGGACAAT
 
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rJMSF029P16+          AGTGGTACTATTACCTATGAAGAATTGAAATCTGGACTGACTCGGCTTGGATCAAAACTC
rJMFF015K02+                                                          GGATCAAAACTC
rJMFF013I16+          AGTGGTACTATTACCTATGAAGAATTGAAATCTGGACTGACTCGGCTTGGATCAAAACTC
rJMFF003J18+                                                         TGGATCAAAACTC
rJMSF048O06+          AGTGGTACTATTACCTATGAAGAATTGAAATCTGGACTGACTCGGCTTGGATCAAAACTC
                      ____________________________________________________________
consensus             AGTGGTACTATTACCTATGAAGAATTGAAATCTGGACTGACTCGGCTTGGATCAAAACTC
 
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rJMSF029P16+          ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACAATT
rJMFF015K02+          ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACAATT
rJMFF013I16+          ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACAATT
rJMFF003J18+          ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACAATT
rJMSF048O06+          ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTAATGTGGATGGAAATGGAACAATT
                      ____________________________________________________________
consensus             ACTGAAGCTGAAGTCAAGCAACTTATGGAAGCTGCTGATGTGGATGGAAATGGAACAATT
 
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rJMSF029P16+          GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGAAAGAGACGAGCAT
rJMFF015K02+          GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGGAAGAGACGAGCAT
rJMFF013I16+          GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGAAAGAGACGAGCAT
rJMFF003J18+          GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGAAAGAGACGAGCAT
rJMSF048O06+          GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGAAAGAGACGAGCAT
rJMFF051E05+                                                      TGAAAGAGACGAGCAT
                      ____________________________________________________________
consensus             GACTACATCGAGTTCATTACTGCAACAATGCACAGACATAGGCTTGAAAGAGACGAGCAT
 
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rJMSF029P16+          CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
rJMFF015K02+          CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
rJMFF013I16+          CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
rJMFF003J18+          CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
JMFS123C08+                      ATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
rJMSF048O06+          CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
rJMFF049D16+                                         ACCATAGTGGATTCATTACAAGAGATGAA
JMFF010P04-                                                 TGGATTCATTACAAGAGATGAA
rJMFF051E05+          CTTATCAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
                      ____________________________________________________________
consensus             CTTTACAAAGCATTTCAGCATTTTGACGCAGACCATAGTGGATTCATTACAAGAGATGAA
 
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rJMSF029P16+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMFF015K02+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMFF013I16+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMFF003J18+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
JMFS123C08+           CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMSF048O06+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMFF049D16+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
JMFF010P04-           CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
rJMFF051E05+          CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
                      ____________________________________________________________
consensus             CTCAAAAGTGCTATGATGGAGTATGGTATGGGCGATGAGGCAACTATCAAAGATATCATT
 
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rJMSF029P16+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMFF015K02+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMFF013I16+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMFF003J18+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
JMFS123C08+           GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMSF048O06+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMFF049D16+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
JMFF010P04-           GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
rJMFF051E05+          GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
                      ____________________________________________________________
consensus             GATGAGGTGGACACAGATAATGATGGAAGGATCAATTATTCGGAGTTTTGTGCAATGATG
 
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rJMSF029P16+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF015K02+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF013I16+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF003J18+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
JMFS123C08+           AGAAGCGGAACGCAACCCCAACAAAAGCTTTTTTAAGTCATTGCGAGGATAAATTTATTA
rJMSF048O06+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF049D16+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF010P04+                    CGCAACCACAACAAAAGCTTTTTTAAGTCANTGCGAGGATGAATTTATTA
JMFF010P04-           AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
rJMFF051E05+          AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
                      ____________________________________________________________
consensus             AGAAGCGGAACGCAACCACAACAAAAGCTTTTTTAAGTCATTGCGAGGATGAATTTATTA
 
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rJMSF029P16+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMFF015K02+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMFF013I16+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMFF003J18+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
JMFS123C08+           TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMSF048O06+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMFF049D16+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATCCATG
rJMFF010P04+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
JMFF010P04-           TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
rJMFF051E05+          TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
                      ____________________________________________________________
consensus             TGATTCAGCGTTATGGAGCCCACCTGTATTGTGAACGAGATTTCATATATAACATACATG
 
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rJMSF029P16+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF015K02+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF013I16+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF003J18+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
JMFS123C08+           GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMSF048O06+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF049D16+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF010P04+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
JMFF010P04-           GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
rJMFF051E05+          GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
                      ____________________________________________________________
consensus             GAAGTTTACAATCTGCATGTTTTTTGTTCATCACTTGACCTTCATAGGTGACTTAAGAAG
 
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rJMSF029P16+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF015K02+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF013I16+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF003J18+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
JMFS123C08+           GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMSF048O06+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF049D16+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF010P04+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
JMFF010P04-           GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
rJMFF051E05+          GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
                      ____________________________________________________________
consensus             GAAACCGGTGTACCCCGAGGCACTTTGGTGTAAATCTCTTTGAGTTATATGTAGTGTGTG
 
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rJMSF029P16+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTA               
rJMFF015K02+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMFF013I16+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMFF003J18+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
JMFS123C08+           TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMSF048O06+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMFF049D16+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMFF010P04+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
JMFF010P04-           TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
rJMFF051E05+          TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
                      ____________________________________________________________
consensus             TGCATATGTCCTAGCTTCGTTCTTGCGCTATAACTTTCTTATTTATGTAACCTGATCTGT
 
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rJMFF015K02+          AACAATTTTACCGGTAGAATAT                                      
rJMFF013I16+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGAT                       
rJMFF003J18+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGT                
JMFS123C08+           AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGT          
rJMSF048O06+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATG       
rJMFF049D16+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATGGTGATCA
rJMFF010P04+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATGGTGATCA
JMFF010P04-           AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATGGTGATCA
rJMFF051E05+          AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATGGTGATCA
                      ____________________________________________________________
consensus             AACAATTTTACCGGTAGAATATGGTCTGTCTAAGGATTTCTTGTTTGGGTATGGTGATCA
 
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rJMFF049D16+          ATGGTTGAGAAT                                                
rJMFF010P04+          ATGGTTGAGAAT                                                
JMFF010P04-           ATGGTTGAGAAT                                                
rJMFF051E05+          ATGGTTGAGAATXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             ATGGTTGAGAATNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGTGATCCGCCATAAGG