| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007N12 | Sequence | 589 | 007363 (3) | ref|XP_006342921.1| | 7e-79 | PREDICTED: cytochrome P450 71A1-like [Solanum tuberosum] | 772 | 008397 (8) | ref|XP_004235547.1| | 4e-115 | PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum] |
| JMFF022H24 | Sequence | 707 | 008397 (8) | ref|XP_004235547.1| | 2e-100 | PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum] | |||||
| JMFF050N22 | Sequence | 632 | 012999 (4) | emb|CBI35858.3| | 8e-77 | unnamed protein product [Vitis vinifera] | 568 | 008397 (8) | emb|CDO97842.1| | 4e-68 | unnamed protein product [Coffea canephora] |
| JMSF004M02 | Sequence | 320 | 008397 (8) | emb|CDO97842.1| | 3e-43 | unnamed protein product [Coffea canephora] | |||||
| JMSF004O04 | Sequence | 322 | 012999 (4) | emb|CBI35858.3| | 5e-36 | unnamed protein product [Vitis vinifera] | 320 | 008397 (8) | emb|CDO97842.1| | 1e-52 | unnamed protein product [Coffea canephora] |
| JMSF015O16 | Sequence | 481 | 012999 (4) | emb|CBI35858.3| | 4e-74 | unnamed protein product [Vitis vinifera] | 693 | 008397 (8) | ref|XP_004235547.1| | 9e-101 | PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum] |
| JMSF017B13 | Sequence | 484 | 012999 (4) | emb|CBI35858.3| | 3e-74 | unnamed protein product [Vitis vinifera] | 736 | 008397 (8) | emb|CDO97842.1| | 2e-115 | unnamed protein product [Coffea canephora] |
| JMSF028A06 | Sequence | 636 | 007363 (3) | emb|CBI35858.3| | 9e-92 | unnamed protein product [Vitis vinifera] | 763 | 008397 (8) | ref|XP_004235547.1| | 4e-141 | PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF028A06+ CTCCAATTGGCTGATGATCCTAGC
____________________________________________________________
consensus CTCCAATTGGCTGATGATCCTAGC
. : . : . : . : . : . :
rJMSF028A06+ CTGGAAGTCAAGCTTGAGAGGCATGGAGTAAAAGCTTTCACCCAGGACATGCTGGCTGGT
____________________________________________________________
consensus CTGGAAGTCAAGCTTGAGAGGCATGGAGTAAAAGCTTTCACCCAGGACATGCTGGCTGGT
. : . : . : . : . : . :
rJMSF028A06+ GGAACAGAGAGCTCTGCAGTCACAGTGGAATGGGCAATTTCTGAGCTCCTAAAGCAGCCA
rJMFF007N12+ CAGAGAGCTCTGCTGTGACAGTGGAGTGGGCAATTTCTGAGCTCCTAAAGAAGCCA
rJMSF017B13+ CAGAGAGCTCTACAGTGACAGTGGAATGGGCAATTTCTGAGCTCCTAAAGAAGCCA
rJMSF015O16+ TAAAGAAGCCA
rJMFF022H24+ TAAAGAAGCCA
____________________________________________________________
consensus GGAACAGAGAGCTCTGCAGTGACAGTGGAATGGGCAATTTCTGAGCTCCTAAAGAAGCCA
. : . : . : . : . : . :
rJMSF028A06+ GAGGTAATCAAGAAGGCCACAGATGAATTAGACCGTGTGATCGGTCAAAAGAGATGGGTA
rJMFF007N12+ GAGATATTCAAGAAGGCGACAGATGAACTAGACCGCGTGATCGGGCAAAAGAGATGGGTA
rJMSF017B13+ GAGGTAATAAAGAAGGCAACATATGAACTAGACCGTGTAATTGGGCAGAAGAGATGGGTA
rJMSF015O16+ GAGGTAATAAAGAAGGCAACATATGAACTAGACCGTGTAATTGGGCAGAAGAGATGGGTA
rJMFF022H24+ GAGGTAATAAAGAAGGCAACATATGAACTAGACCGTGTAATTGGGCAGAAGAGATGGGTA
____________________________________________________________
consensus GAGGTAATAAAGAAGGCAACATATGAACTAGACCGTGTAATTGGGCAGAAGAGATGGGTA
. : . : . : . : . : . :
rJMSF028A06+ GAAGAGAAGGACATGCCAAATCTTCCATACATCCAGGCAATAGTTAAAGAGGTAATGAGA
rJMFF007N12+ GAGGAGAAGGACATGCCAAATCTTCCATACATCCAAGCAATAGTTAAGGAGACGATGAGA
rJMSF017B13+ GAAGAGAAGGACATGCCAAATCTTCCATACATCCAAGCAATAGTTAAGGAGGCAATGAGA
rJMSF015O16+ GAAGAGAAGGACATGCCAAATCTTCCATACATCCAAGCAATAGTTAAGGAGGCAATGAGA
rJMFF022H24+ GAAGAGAAGGACATGCCAAATCTTCCATACATCCAAGCAATAGTTAAGGAGGCAATGAGA
____________________________________________________________
consensus GAAGAGAAGGACATGCCAAATCTTCCATACATCCAAGCAATAGTTAAGGAGGCAATGAGA
. : . : . : . : . : . :
rJMSF028A06+ TTGCACCCGGTGGCGCCAATGCTGGTGCCACGCCTTTGTCGCGAGGACTGCAAGGTTGCT
rJMFF007N12+ TTGCACCCAGTGGGGCCGATGCTGGCTCCACGCCTTAGCCGCGAGGACTGCAAGGTCACA
rJMSF017B13+ TTGCACCCGGTGGTGCCGACGTTGGTGCCACGCCTTTGCCGTGAGGACTGCAAGGTCGCG
rJMSF015O16+ TTGCACCCGGTGGTGCCGACGTTGGTGCCACGCCTTTGCCGTGAGGACTGCAAGGTCGCG
rJMFF022H24+ TTGCACCCGGTGGTGCCGACGTTGGTGCCACGCCTTTGCCGTGAGGACTGCAAGGTCGCG
rJMFF050N22+ CCTTTGCCGTGAGGACTGCAAGGTCGCG
____________________________________________________________
consensus TTGCACCCGGTGGTGCCGACGTTGGTGCCACGCCTTTGCCGTGAGGACTGCAAGGTCGCG
. : . : . : . : . : . :
rJMSF028A06+ GGCTATGACATTCCGAAAGGCACTCGAGTTTTGGTGAGCGTTTGGACCGTCGCGAGAGAC
rJMFF007N12+ GGCTATGACATTCCCAAAGGCACCCGAATCCTAGTGAGCGTTTGGAGCATTGGGAGAGAC
rJMSF017B13+ GGCTATGACATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
rJMSF004O04+ CATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
rJMSF004M02+ AGTGAGCACTCGGNCAATTGGAAGAGAT
rJMSF015O16+ GGCTATGACATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
rJMFF022H24+ GGCTATGACATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
rJMFF050N22+ GGCTATGACATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
____________________________________________________________
consensus GGCTATGACATTCCAAAGGGCACTCGAGTACTAGTGAGCACCTGGACAATTGGAAGAGAT
. : . : . : . : . : . :
rJMSF028A06+ CCAGCATTATGGGACAATCCGAATGAATTCATTCCTGATAGATTCATTGGAAAGGACATT
rJMFF007N12+ CCAACATTGTGGGATAATCCAAACGAGTTTATTCCCGATAGATTCATTGGAAAAGATATT
rJMSF017B13+ CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
rJMSF004O04+ CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
rJMSF004M02+ CNGGCNCTATGNGACAATCCAACNGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
rJMSF015O16+ CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
rJMFF022H24+ CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
rJMFF050N22+ CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
____________________________________________________________
consensus CCGGCTCTATGGGACAATCCAACCGAGTTCATTCCTGACAGGTTCATTGCAAGGGATATT
. : . : . : . : . : . :
rJMSF028A06+ GACGTGAAAGGGTGCGATTTTGAACTCTTACCATTTGGTGCGGGGAGAAGGATGTGTCCA
rJMFF007N12+ GATGTTAAAGGATGCGATTTTGAACTTTTGCCATTTGGGGCGGGAAGGAGAATGTGCCCT
rJMSF017B13+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
rJMSF004O04+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
rJMSF004M02+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
rJMSF015O16+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
rJMFF022H24+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
rJMFF050N22+ GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
____________________________________________________________
consensus GATATTAAAGGTTGTGATTTCGAACTCTTACCATTTGGTGCCGGGAGAAGAATGTGCCCC
. : . : . : . : . : . :
rJMSF028A06+ GGCTATAGTCTTGGCCTCAAAGTCATTCAGGCTAGCTTGGGTAACCTCTTGCATGGGTTT
rJMFF007N12+ GGCTATAGTCTCGGACTTAAGGTTATTCAAGCTAGCTTGGCTAACCTCTTACAAGGGTTC
rJMSF017B13+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTACCTTGGCTAATCTCTTACATGGGTTC
rJMSF004O04+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTACCTTGGCTAATCTCTTACATGGGTTC
rJMSF004M02+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTNCCTTGGCTAATCTCTTACATGGGTTC
rJMSF015O16+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTACCTTGGCTAATCTCTTACATGGGTTC
rJMFF022H24+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTTCCTTGGCTAATCTCTTACATGGGTTC
rJMFF050N22+ GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTACCTTGGCTAATCTCTTACATGGGTTC
____________________________________________________________
consensus GGTTATAGTCTTGGGTTTAAGGTAATTCATGTTACCTTGGCTAATCTCTTACATGGGTTC
. : . : . : . : . : . :
rJMSF028A06+ AATTGGAAATTGCCAAATGATGTGACTCCGGAAAAGCTCAACATGGAAGAGATCTTTGGA
rJMFF007N12+ AATTGGAGATTGCCAAATGATGTAACTCCGGAGAAGCTCAACATGGAAGAGATCTTTGGG
rJMSF017B13+ AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
rJMSF004O04+ AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
rJMSF004M02+ AATTGGAAATTACCAAACGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
rJMSF015O16+ AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
rJMFF022H24+ AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
rJMFF050N22+ AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
____________________________________________________________
consensus AATTGGAAATTACCAAATGATATGATTCCGGAGCAGCTCAACATGGAAGAGATCTTTGGG
. : . : . : . : . : . :
rJMSF028A06+ CTTTCTACACCAAAGAAATTCCCACT
rJMFF007N12+ CTTTCTACCCCAAAGAAAATCCCACTTG
rJMSF017B13+ CTTACTACACCAAAGAAAATCCCACTTGCCGTTGTCATTGAGCCCAAGCTTCCCATGCAT
rJMSF004O04+ CTTACTACACCAAAGAAAATCCCACT
rJMSF004M02+ CTTNCTACACCAAAGANAATCCCACTTGCCGTTGTCA
rJMSF015O16+ CTTACTACACCAAAGAAAATCCCACTTGCCGTTGTCATTGAGCCCAAGCTTCCCATGCAT
rJMFF022H24+ CTTACTACACCAAAGAAAATCCCACTTGCCGTTGTCATTGAGCCCAAGCTTCCCATGCAT
rJMFF050N22+ CTTACTACACCAAAGAAAATCCCACTTGCCGTTGTCATTGAGCCCAAGCTTCCCATGCAT
____________________________________________________________
consensus CTTACTACACCAAAGAAAATCCCACTTGCCGTTGTCATTGAGCCCAAGCTTCCCATGCAT
. : . : . : . : . : . :
rJMSF017B13+ GTTTATTCTATTTAAGATTTTTTTTGAATTTTTATTTTCTTTAAAGCATTGTTGGAATCT
rJMSF015O16+ GTTTATTCTATTTAAGATTTTTTTTGAATTTTTATTTTCTTTAAAGCATTGTTGGAATCT
rJMFF022H24+ GTTTATTCTATTTAAGATTTTTTTTGAATTTTTATTTTCTTTAAAGCATTGTTGGAATCT
rJMFF050N22+ GTTTATTCTATTTAAGATTTTTTTTGAATTTTTATTTTCTTTAAAGCATTGTTGGAATCT
____________________________________________________________
consensus GTTTATTCTATTTAAGATTTTTTTTGAATTTTTATTTTCTTTAAAGCATTGTTGGAATCT
. : . : . : . : . : . :
rJMSF017B13+ ATGTGTGCAATTGTTTAAGTTACTAAAAAATAACCACTATGTATTAAAGAC
rJMSF015O16+ ATGTGTGCAATTGTTTAAGTTACTAAAAAATAACCACTATGTATTAAAGACGATGAGTGT
rJMFF022H24+ ATGTGTGCAATTGTTTAAGTTACTAAAAAATAACCACTATGTATTAAAGACGATGAGTGT
rJMFF050N22+ ATGTGTGCAATTGTTTAAGTTACTAAAAAATAACCACTATGTATTAAAGACGATGAGTGT
____________________________________________________________
consensus ATGTGTGCAATTGTTTAAGTTACTAAAAAATAACCACTATGTATTAAAGACGATGAGTGT
. : . : . : . : . : . :
rJMSF015O16+ GTAATAATT
rJMFF022H24+ GTAATAATTTAAACATATTGTTGGGATT
rJMFF050N22+ GTAATAATTTAAACATATTGTTGGGATTXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
____________________________________________________________
consensus GTAATAATTTAAACATATTGTTGGGATTNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT