Contig 008387:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008A09Sequence542003292 (3)717008387 (3)ref|XP_009767028.1|2e-82PREDICTED: probable protein phosphatase 2C 3 isoform X3 [Nicotiana sylvestris]
JMFF038F04Sequence503003292 (3)182008387 (3)gb|KDO38779.1|2e-05hypothetical protein CISIN_1g033174mg [Citrus sinensis]
JMFF049N17Sequence636003292 (3)630008387 (3)ref|XP_009767028.1|2e-55PREDICTED: probable protein phosphatase 2C 3 isoform X3 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF008A09+ TCTCGGGGATTGCCTGCTGAGCTTGCAGCTCGTCAAGTGGTCAAGGGAA
                      ____________________________________________________________
consensus TCTCGGGGATTGCCTGCTGAGCTTGCAGCTCGTCAAGTGGTCAAGGGAA
 
. : . : . : . : . : . :
rJMFF008A09+ GCGTTGAGGACACGTGGTTTGAAGGACGACACGACCTGCATAGTAGTCGACATAATTCCC
                      ____________________________________________________________
consensus GCGTTGAGGACACGTGGTTTGAAGGACGACACGACCTGCATAGTAGTCGACATAATTCCC
 
. : . : . : . : . : . :
rJMFF008A09+ CCCGAAACCGTTGTGCAGCCTTCAATTACCCCCAAGAAGTATAATAAGCTTCAAGCACTA
rJMFF049N17+ CCCCAAGAAGTATAATAAGCTTCAAGCACTA
                      ____________________________________________________________
consensus CCCGAAACCGTTGTGCAGCCTTCAATTACCCCCAAGAAGTATAATAAGCTTCAAGCACTA
 
. : . : . : . : . : . :
rJMFF008A09+ TTATTTCGAAAGAAATCTGCTACTAAGCCTTCGAAAAAGCTGTCAGCTGTTGGTATAGTG
rJMFF049N17+ -TATTTCGAAAGAAATCTGCTACTAAGCCTTCGAAAAAGCTGTCAGCTGTTGGTATAGTG
                      ____________________________________________________________
consensus TTATTTCGAAAGAAATCTGCTACTAAGCCTTCGAAAAAGCTGTCAGCTGTTGGTATAGTG
 
. : . : . : . : . : . :
rJMFF008A09+ GAGGAATTGTTCGAGGAGGGGTCTGCAATGCTCGCCGAAAGATTGGGGAGCGAAGATTCA
rJMFF049N17+ GAGGAATTGTTCGAGGAGGGGTCTGCAATGCTCGCCGAAAGATTGGGGAGCGAAGATTCA
                      ____________________________________________________________
consensus GAGGAATTGTTCGAGGAGGGGTCTGCAATGCTCGCCGAAAGATTGGGGAGCGAAGATTCA
 
. : . : . : . : . : . :
rJMFF008A09+ AATGGTCCGTCGATGTCTGGTCTCTTCATTTGCGCGGTTTGCCAGGTCGACCTTGGTGCG
rJMFF049N17+ AATGGTCCGTCGATGTCTGGTCTCTTCATTTGCGCGGTTTGCCAGGTCGACCTTGGTGCG
                      ____________________________________________________________
consensus AATGGTCCGTCGATGTCTGGTCTCTTCATTTGCGCGGTTTGCCAGGTCGACCTTGGTGCG
 
. : . : . : . : . : . :
rJMFF008A09+ AGCGAAGGCATATCGGTGCATGCTGGGGCCATCTTCTCCACGAGCTCGAAGCCATGGCAA
rJMFF038F04+ TGGGGCCATCTTNTCCNCGAGCTNGAANCCATGGCAA
rJMFF049N17+ AGCGAAGGCATATCGGTGCATGCTGGGGCCATCTTCTCCACGAGCTCGAAGCCATGGCAA
                      ____________________________________________________________
consensus AGCGAAGGCATATCGGTGCATGCTGGGGCCATCTTCTCCACGAGCTCGAAGCCATGGCAA
 
. : . : . : . : . : . :
rJMFF008A09+ GGTCCTTTCCTCTGCACGGACTGCCGCAACAAGAAGGATGCCATGGAAGGGAAACGCCCA
rJMFF038F04+ GGTCCTTTCCTCNGCNCGGANTGCCGCNNCANGAAGGATNCCANCNAAGGGAAACGCNCA
rJMFF049N17+ GGTCCTTTCCTCTGCACGGACTGCCGCAACAAGAAGGATGCCATGGAAGGGAAACGCCCA
                      ____________________________________________________________
consensus GGTCCTTTCCTCTGCACGGACTGCCGCAACAAGAAGGATGCCATGGAAGGGAAACGCCCA
 
. : . : . : . : . : . :
rJMFF008A09+ AGTGGAGTTAAAGTTGCTTAACTCCATTGTCTCTGATGGATGGATGATCTGAATGGCTGT
rJMFF038F04+ AGTGGAGTTANAGTTGCTTAACTCCATTGTCTNTGATGGATGGATGATNTGAATGGCNGT
rJMFF049N17+ AGTGGAGTTAAAGTTGCTTAACTCCATTGTCTCTGATGGATGGATGATCTGAATGGCTGT
                      ____________________________________________________________
consensus AGTGGAGTTAAAGTTGCTTAACTCCATTGTCTCTGATGGATGGATGATCTGAATGGCTGT
 
. : . : . : . : . : . :
rJMFF008A09+ AATTGTTTCTCATGCTCACCCAGTTCTTAGGATTTAATTGTGTCACAACAAATGTATGTA
rJMFF038F04+ AATNGCCTCTCATGCTCACCCA
rJMFF049N17+ AATTGTTTCTCATGCTCACCCAGTTCTTAGGATTTAATTGTGTCACAACAAATGTATGTA
                      ____________________________________________________________
consensus AATTGTTTCTCATGCTCACCCAGTTCTTAGGATTTAATTGTGTCACAACAAATGTATGTA
 
. : . : . : . : . : . :
rJMFF008A09+ TCATTCCAGAAAATAATGTAAAAAAATGGGTTATCTCAATAAAGGAAAAGGGGAGCCTTT
rJMFF049N17+ TCATTCCAGAAAATAATGTAAAAAAATGGGTTATCTCAATAAAGGAAAAGGGGAGCCTTT
                      ____________________________________________________________
consensus TCATTCCAGAAAATAATGTAAAAAAATGGGTTATCTCAATAAAGGAAAAGGGGAGCCTTT
 
. : . : . : . : . : . :
rJMFF008A09+ GTAGGTGGCTTTTTGTGATGGATTATCTTGGTAATTAGAATGATACTTTATTGTTGTTAT
rJMFF049N17+ GTAGGTGGCTTTTTGTGATGGATTATCTTGGTAATTAGAATGATACTTTATTGTTGTTAT
                      ____________________________________________________________
consensus GTAGGTGGCTTTTTGTGATGGATTATCTTGGTAATTAGAATGATACTTTATTGTTGTTAT
 
. : . : . : . : . : . :
rJMFF008A09+ AA
rJMFF049N17+ AATGAACATGAGTTAATTCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus AATGAACATGAGTTAATTCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAACTCTCCAGGGT