Contig 008381:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF014K15+                                       TTGAGATGCTGAAAAGGTACGAGCTTCCGGA
rJMFF036C23+                                                                 CCGGA
                      ____________________________________________________________
consensus                                          TTGAGATGCTGAAAAGGTACGAGCTTCCGGA
 
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rJMSF014K15+          TGAGTTTGAAGCAGAGGCGNACTGGGTGAAACTAGGAACCGAGTTTTCGTAGACAGGCTG
rJMFF036C23+          TGAGTTTGAAGCAGAGGCGAACTGGGTGAAACTAGGAACCGAG-TTTCGTAGACAGGCTG
                      ____________________________________________________________
consensus             TGAGTTTGAAGCAGAGGCGAACTGGGTGAAACTAGGAACCGAGTTTTCGTAGACAGGCTG
 
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rJMSF014K15+          AGCCTTTGGATATTGCTAACTACTACAGGCACNTGAAGAATGAAGACACTGGACCTTACA
rJMFF036C23+          AGCCTTTGGATATTGCTAACTACTACAGGCACTTGAAGAATGAAGACACTGGACCTTACA
                      ____________________________________________________________
consensus             AGCCTTTGGATATTGCTAACTACTACAGGCACTTGAAGAATGAAGACACTGGACCTTACA
 
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rJMSF014K15+          TGAACAGGGCTAGGCCAAAGCGGTACCGGTTTACACAAAGATGGTTGGAGCATGCAGAGA
rJMFF036C23+          TGAACAGGGCTAGGCCAAAGCGGTACCGGTTTACACAAAGATGGTTGGAGCATGCAGAGA
                      ____________________________________________________________
consensus             TGAACAGGGCTAGGCCAAAGCGGTACCGGTTTACACAAAGATGGTTGGAGCATGCAGAGA
 
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rJMSF014K15+          GGAAGTGCGTGGGGGAGCGTTCAGAATCCTGTTTCTGGGCCGAAGTGGAGGAGCTGAAAA
rJMFF036C23+          GGAAGTGCGTGGGGGAGCGTTCAGAATCCTGTTTCTGGGCCGAAGTGGAGGAGCTGAAAA
                      ____________________________________________________________
consensus             GGAAGTGCGTGGGGGAGCGTTCAGAATCCTGTTTCTGGGCCGAAGTGGAGGAGCTGAAAA
 
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rJMSF014K15+          ATATACCAGTTCAAAATAACTCGGGTGTAATGGAGAGAATTGGGATCTTAGAGGATAAAA
rJMFF036C23+          ATATACCAGTTCAAAATAACTCGGGTGTAATGGAGAGAATTGGGATCTTAGAGGATAAAA
                      ____________________________________________________________
consensus             ATATACCAGTTCAAAATAACTCGGGTGTAATGGAGAGAATTGGGATCTTAGAGGATAAAA
 
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rJMSF014K15+          CAAAGGAATGGTTTAGCAATGAATGGCTTGGCAAAGATATTTTCTTAGAAGAGTCCACCT
rJMFF036C23+          CAAAGGAATGGTTTAGCAATGAATGGCTTGGCAAAGATATTTTCTTAGAAGAGTCCACCT
                      ____________________________________________________________
consensus             CAAAGGAATGGTTTAGCAATGAATGGCTTGGCAAAGATATTTTCTTAGAAGAGTCCACCT
 
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rJMSF014K15+          TTGCCAAGTGGTGGAAAACTCTTCCTCTCAGTCACAGGCAAGGATCTTGGATCTCACATC
rJMFF036C23+          TTGCCAAGTGGTGGAAAACTCTTCCTCTCAGTCACAGGCAAGGATCTTGGATCTCACATC
rJMFF048P13+                                                                CACATC
                      ____________________________________________________________
consensus             TTGCCAAGTGGTGGAAAACTCTTCCTCTCAGTCACAGGCAAGGATCTTGGATCTCACATC
 
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rJMSF014K15+          ATCTCACTGTATAAAGATTATTACTCTGTTGCTCGCACGGGCTTAGTTCAATAATTCAGT
rJMFF036C23+          ATCTCACTGTATAAAGATTATTACTCTGTTGCTCGCACGGGCTTAGTTCAATAATTCAGT
rJMFF048P13+          ATCTCACTGTATAAAGATTATTACTCTGTTGCTCGCACGGGCTTAGTTCAATAATTCAGT
                      ____________________________________________________________
consensus             ATCTCACTGTATAAAGATTATTACTCTGTTGCTCGCACGGGCTTAGTTCAATAATTCAGT
 
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rJMSF014K15+          AGGCAGTATATGAGAAAAGAGACTCGGTAGCAGCAGTGTGGGGATTATATTCAAAGTGGG
rJMFF036C23+          AGGCAGTATATGAGAAAAGAGACTCGGTAGCAGCAGTGTGGGGATTATATTCAAAGTGGG
rJMFF048P13+          AGGCAGTATATGAGAAAAGAGACTCGGTAGCAGCAGTGTGGGGATTATATTCAAAGTGGG
                      ____________________________________________________________
consensus             AGGCAGTATATGAGAAAAGAGACTCGGTAGCAGCAGTGTGGGGATTATATTCAAAGTGGG
 
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rJMSF014K15+          CAGATCCCTTGTGCGGACCGACATTTGGCCCTGTCTACTAAGCCAGAAGAAGGAAGATTA
rJMFF036C23+          CAGATCCCTTGTGCGGACCGACATTTGGCCCTGTCTACTAAGCCAGAAGAAGGAAGATTA
rJMFF048P13+          CAGATCCCTTGTGCGGACCGACATTTGGCCCTGTCTACTAAGCCAGAAGAAGGAAGATTA
                      ____________________________________________________________
consensus             CAGATCCCTTGTGCGGACCGACATTTGGCCCTGTCTACTAAGCCAGAAGAAGGAAGATTA
 
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rJMSF014K15+          TTACTCTGTCTCAATTGTCTTTGGCATTTCAAAGTTCTACCTTTCCAGTTTCTGTGTGAT
rJMFF036C23+          TTACTCTGTCTCAATGGTCTTTGGCATTTCAAAGTTCTACCTTTCCAGTTTCTGTGTGAT
rJMFF048P13+          TTACTCTGTCTCAATGGTCTTTGGCATTTCAAAGTTCTACCTTTCCAGTTTCTGTGTGAT
                      ____________________________________________________________
consensus             TTACTCTGTCTCAATGGTCTTTGGCATTTCAAAGTTCTACCTTTCCAGTTTCTGTGTGAT
 
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rJMSF014K15+          GGGAAAATAATTGGCGAATATGCCGCCACATTATTGTGGTGCAATTGGCAAATATGCCGC
rJMFF036C23+          GGGAAAATAATTGGCGAATATGCCGCCACATTATTGTGATGCAATTGGCAAATATGCCGC
rJMFF048P13+          GGGAAAATAATTGGCGAATATGCCGCCACATTATTGTGATGCAATTGGCAAATATGCCGC
                      ____________________________________________________________
consensus             GGGAAAATAATTGGCGAATATGCCGCCACATTATTGTGATGCAATTGGCAAATATGCCGC
 
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rJMSF014K15+          CACATTATTGTGATGCAA                                          
rJMFF036C23+          CACATTATTGTGATGCAAAGTATGCAGCGT                              
rJMFF048P13+          CACATTATTGTGATGCAAAGTATGCAGCGTGTTTATAAAGAATGTCTCTCCATCTTTTCT
                      ____________________________________________________________
consensus             CACATTATTGTGATGCAAAGTATGCAGCGTGTTTATAAAGAATGTCTCTCCATCTTTTCT