Contig 008357:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014G23Sequence451007334 (5)322008357 (4)
JMFF035C05Sequence542007334 (5)ref|XP_009605872.1|4e-10PREDICTED: GATA transcription factor 5 [Nicotiana tomentosiformis]308008357 (4)
JMFF045K03Sequence521007334 (5)ref|XP_009605872.1|4e-14PREDICTED: GATA transcription factor 5 [Nicotiana tomentosiformis]582008357 (4)ref|XP_006340696.1|4e-45PREDICTED: GATA transcription factor 5-like [Solanum tuberosum]
JMFF046F20Sequence435007334 (5)402008357 (4)

Alignment

This contig is upended


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rJMFF045K03+                          AGCAGCCAAGGCGGTGCAGCCATTGCGGCGTCCAGAAGACCCCA
                      ____________________________________________________________
consensus                             AGCAGCCAAGGCGGTGCAGCCATTGCGGCGTCCAGAAGACCCCA
 
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rJMFF045K03+          CAGTGGCGGGCCGGGCCGCTCGGAGCCAAGACGCTCTGCAACGCCTGTGGAGTCCGGTTC
                      ____________________________________________________________
consensus             CAGTGGCGGGCCGGGCCGCTCGGAGCCAAGACGCTCTGCAACGCCTGTGGAGTCCGGTTC
 
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rJMFF045K03+          AAGTCCGGCCGCCTCCTCCCGGAGTACCGCCCCGCCTGCAGCCCCACCTTCTCCAGCCAG
                      ____________________________________________________________
consensus             AAGTCCGGCCGCCTCCTCCCGGAGTACCGCCCCGCCTGCAGCCCCACCTTCTCCAGCCAG
 
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rJMFF045K03+          CTCCACTCCAACAACCACCGGAAAGTCCTCGAGATGCGGCGGAAGAAAGAATCGGAAGAC
rJMFF046F20+                            CGGAAAGTCCTCGAGATGCGGCGGAAGAAAGAATCGGAAGAC
                      ____________________________________________________________
consensus             CTCCACTCCAACAACCACCGGAAAGTCCTCGAGATGCGGCGGAAGAAAGAATCGGAAGAC
 
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rJMFF045K03+          TCGCCGGGATTCGCTCCGCCGGTCCAGAGTTTTTGAAAAAATTAAGGTTAACCCTTTAGG
rJMFF046F20+          TCGCCGGGATTCGCTCCGCCGGTCCAGAGTTTTTGAAAAAATTAAGGTTAACCCTTTAGG
                      ____________________________________________________________
consensus             TCGCCGGGATTCGCTCCGCCGGTCCAGAGTTTTTGAAAAAATTAAGGTTAACCCTTTAGG
 
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rJMFF045K03+          CTTAGTTTGTTTC--AAAAAAAAAAAACCCTTTAGGCTTAGTAGTAGACTAGTAGTTGTC
rJMFF035C05+                         AAAAAAAAAAAACCCTTTAGGCTTAGTAGTAGACTAGTAGTTGTC
rJMFF014G23+                         AAAAAAAAAAAACCCTTTAGGCTTAGTAGTAGACTAGTAGTTGTC
rJMFF046F20+          CTTAGTTTGTTTCAAAAAAAAAAAAAACCCTTTAGGCTTAGTAGTAGACTAGTAGTTGTC
                      ____________________________________________________________
consensus             CTTAGTTTGTTTCAAAAAAAAAAAAAACCCTTTAGGCTTAGTAGTAGACTAGTAGTTGTC
 
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rJMFF045K03+          AGAAATAGCGTAAAACGCAAAAAGAAAGAAGAAAAAAAACCCGGAAATTTTAGGGATAGC
rJMFF035C05+          AGAAATAGCGTAAAACGCAAAAAGAAAGAAGAAAAAAAACCCGGAAATTTTAGGGATAGC
rJMFF014G23+          AGAAATAGCGTAAAACGCAAAAAGAAAGAAGAAAAAAAACCCGGAAATTTTAGGGATAGC
rJMFF046F20+          AGAAATAGCGTAAAACGCAAAAAGAAAGAAGAAAAAAAACCCGGAAATTTTAGGGATAGC
                      ____________________________________________________________
consensus             AGAAATAGCGTAAAACGCAAAAAGAAAGAAGAAAAAAAACCCGGAAATTTTAGGGATAGC
 
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rJMFF045K03+          GAGACGACAAAAAACCGGAGTCGAATTGTTGAGAGGTTAGATCGGGTCGATTAAGAACCG
rJMFF035C05+          GAGACGACAAAAAACCGGAGTCGAATTGTTGAGAGGTTAGATCGGGTCGATTAAGAACCG
rJMFF014G23+          GAGACGACAAAAAACCGGAGTCGAATTGTTGAGAGGTTAGATCGGGTCGATTAAGAACCG
rJMFF046F20+          GAGACGACAAAAAACCGGAGTCGAATTGTTGAGAGGTTAGATCGGGTCGATTAAGAACCG
                      ____________________________________________________________
consensus             GAGACGACAAAAAACCGGAGTCGAATTGTTGAGAGGTTAGATCGGGTCGATTAAGAACCG
 
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rJMFF045K03+          GTTCAGTGTACATTTTTTAGGGGTAGACCGGCAGACCGCTGGTTGGTGCGGTAGGTTTTC
rJMFF035C05+          GTTCAGTGTACATTTTTTAGGGGTAGACCGGCAGACCGCTGGTTGGTGCGGTAGGTTTTC
rJMFF014G23+          GTTCAGTGTACATTTTTTAGGGGTAGACCGGCAGNCCGCTGGTTGGTGCGGTAGGTTTTC
rJMFF046F20+          GTTCAGTGTACATTTTTTAGGGGTAGACCGGCAGACCGCTGGTTGGTGCGGTAGGTTTTC
                      ____________________________________________________________
consensus             GTTCAGTGTACATTTTTTAGGGGTAGACCGGCAGACCGCTGGTTGGTGCGGTAGGTTTTC
 
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rJMFF045K03+          GAGTGTTAGTGTAACGTATGAGGACTGAGGAGAGGCTTTTAATGTACTTTCCCTTTAAAC
rJMFF035C05+          GAGTGTTAGTGTAACGTATGAGGACTGAGGAGAGGC                        
rJMFF014G23+          GAGTGTTAGTGTAACGTATGAGGACTGAGGAGAGGC                        
rJMFF046F20+          GAGTGTTAGTGTAACGTATGAGGACTGAGGAGAGGCTTTTAATGTACTTTCCCTTTAAAC
                      ____________________________________________________________
consensus             GAGTGTTAGTGTAACGTATGAGGACTGAGGAGAGGCTTTTAATGTACTTTCCCTTTAAAC