Contig 008338:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045A19Sequence641009113 (3)ref|NP_001234686.1|1e-15protein phosphatase 2C ABI2 homolog [Solanum lycopersicum] dbj|BAI39595.1| prote605008338 (2)ref|XP_011079888.1|9e-33PREDICTED: protein phosphatase 2C 16-like [Sesamum indicum] ref|XP_011079897.1|
JMSF021P17Sequence477007875 (2)648008338 (2)ref|XP_011079888.1|4e-56PREDICTED: protein phosphatase 2C 16-like [Sesamum indicum] ref|XP_011079897.1|

Alignment

This contig is upended


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rJMSF021P17+                                                         TCTACTACATGCT
                      ____________________________________________________________
consensus                                                            TCTACTACATGCT
 
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rJMSF021P17+          TCTCAGCCTGACCACCTCGGATTTTCCTCAGGCGACAGGTACCTTAAACCATGGATTATA
                      ____________________________________________________________
consensus             TCTCAGCCTGACCACCTCGGATTTTCCTCAGGCGACAGGTACCTTAAACCATGGATTATA
 
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rJMSF021P17+          CCGGAACCAGAAGTCATGTTTATTCCCCGAGCTAGAGAAGACGAATGCCTAGTCTTGGCT
rJMFF045A19+                                                                 TGGCT
                      ____________________________________________________________
consensus             CCGGAACCAGAAGTCATGTTTATTCCCCGAGCTAGAGAAGACGAATGCCTAGTCTTGGCT
 
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rJMSF021P17+          AGCGACGGGTTGTGGGATGTGATGACAAACGAGGAAGCATGTGAGGCAGCCCGAAAAAAG
rJMFF045A19+          AGCGACGGGTTGTGGGATGTGATGACAAACGAGGAAGCATGTGAGGCAGCCCGAAAAAAG
                      ____________________________________________________________
consensus             AGCGACGGGTTGTGGGATGTGATGACAAACGAGGAAGCATGTGAGGCAGCCCGAAAAAAG
 
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rJMSF021P17+          ATTCTGATTTGGCACAAAAAGAACGGTTCGAACCATTTTGACAGGGGCACGGGAGTCGAT
rJMFF045A19+          ATTCTGATTTGGCACAAAAAGAACGGTTCGAACCATTTTGACAGGGGCACGGGAGTCGAT
                      ____________________________________________________________
consensus             ATTCTGATTTGGCACAAAAAGAACGGTTCGAACCATTTTGACAGGGGCACGGGAGTCGAT
 
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rJMSF021P17+          CCTGCTGCACAAGCTGCAGCGGAGTATCTTTCCATGCTTGCTCTCCAGAAAGGAAGCAGA
rJMFF045A19+          CCTGCTGCACAAGCTGCAGCGGAGTATCTTTCCATGCTTGCTCTCCAGAAAGGAAGCAGA
                      ____________________________________________________________
consensus             CCTGCTGCACAAGCTGCAGCGGAGTATCTTTCCATGCTTGCTCTCCAGAAAGGAAGCAGA
 
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rJMSF021P17+          GACAATATCTCCATTATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCA
rJMFF045A19+          GACAATATCTCCATTATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCA
                      ____________________________________________________________
consensus             GACAATATCTCCATTATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCA
 
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rJMSF021P17+          TAAAGACTTAAAAAGTGACACTATGGCTCACCATTATTCAGCACTAATACAATTCATGTA
rJMFF045A19+          TAAAGACTTAAAAAGTGACACTATGGCTCACCATTATTCAGCACTAATACAATTCATGTA
                      ____________________________________________________________
consensus             TAAAGACTTAAAAAGTGACACTATGGCTCACCATTATTCAGCACTAATACAATTCATGTA
 
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rJMSF021P17+          AGCCATGAATTTACACTGTCATTATTACATATAATTTTGGTCCATTCATTTTTCATATGG
rJMFF045A19+          AGCCATGAATTTACACTGTCATTATTACATATAATTTTGGTCCATTCATTTTTCATATGG
                      ____________________________________________________________
consensus             AGCCATGAATTTACACTGTCATTATTACATATAATTTTGGTCCATTCATTTTTCATATGG
 
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rJMSF021P17+          GCTTAAAGTGTGTGTAGGGTTATAGTGCTTAGTATGTATTCATAGAAAACAGTTTAACAG
rJMFF045A19+          GCTTAAAGTGTGTGTAGGGTTATAGTGCTTAGTATGTATTCATAGAAAACAGTTTAACAG
                      ____________________________________________________________
consensus             GCTTAAAGTGTGTGTAGGGTTATAGTGCTTAGTATGTATTCATAGAAAACAGTTTAACAG
 
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rJMSF021P17+          ATGACCCTTTTCCTAATTTTTGCTTTTCTCATACACTGCCAATATGTTTATGTAAATCTA
rJMFF045A19+          ATGACCCTTTTCCTAATTTTTGCTTTTCTCATACACTGCCAATATGTTTATGTAAATCTA
                      ____________________________________________________________
consensus             ATGACCCTTTTCCTAATTTTTGCTTTTCTCATACACTGCCAATATGTTTATGTAAATCTA
 
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rJMSF021P17+          GTTGTGTTGTAGAAA                                             
rJMFF045A19+          GTTGTGTTGTAGAAACAGTGAGCTGTAAAATCTCTTGTATTTAGCCCATGAATGTTCTTG
                      ____________________________________________________________
consensus             GTTGTGTTGTAGAAACAGTGAGCTGTAAAATCTCTTGTATTTAGCCCATGAATGTTCTTG
 
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rJMFF045A19+          CATCTAGCAACCAAAGTTCAGGAATGTTGCAGAGTTGTGATTTCAGATTGTTATTACTGC
                      ____________________________________________________________
consensus             CATCTAGCAACCAAAGTTCAGGAATGTTGCAGAGTTGTGATTTCAGATTGTTATTACTGC