| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF014B01 | Sequence | 689 | 008310 (8) | ref|XP_009758373.1| | 4e-83 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
| JMFF031H10 | Sequence | 116 | 016302 | 773 | 008310 (8) | gb|EYU24993.1| | 4e-91 | hypothetical protein MIMGU_mgv1a015755mg [Erythranthe guttata] | |||
| JMFF042D20 | Sequence | 647 | 008310 (8) | gb|EYU24993.1| | 5e-92 | hypothetical protein MIMGU_mgv1a015755mg [Erythranthe guttata] | 525 | 008310 (8) | ref|XP_004251250.1| | 5e-39 | PREDICTED: probable calcium-binding protein CML13 [Solanum lycopersicum] |
| JMFN013A09 | Sequence | 621 | 008310 (8) | ref|XP_009758373.1| | 4e-90 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
| JMFN031N22 | Sequence | 558 | 008310 (8) | ref|XP_009758373.1| | 1e-46 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
| JMSF026E15 | Sequence | 686 | 008310 (8) | ref|XP_009758373.1| | 5e-89 | PREDICTED: probable calcium-binding protein CML13 [Nicotiana sylvestris] | |||||
| JMSF040H05 | Sequence | 126 | 002341 (2) | 790 | 008310 (8) | gb|EYU24993.1| | 5e-91 | hypothetical protein MIMGU_mgv1a015755mg [Erythranthe guttata] | |||
This contig is upended
. : . : . : . : . : . :
JMFF042D20- AGGAACCGTAAGGAAAAACTG
____________________________________________________________
consensus AGGAACCGTAAGGAAAAACTG
. : . : . : . : . : . :
JMFF042D20- CGAGAGAGAGAGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
____________________________________________________________
consensus CGAGAGAGAGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
. : . : . : . : . : . :
JMFF042D20- XXGGAGAGAGAGGAGAGAGAGAGAGAGGAAATGGGGAAAGATCTGACCGAAGATCAAAAG
rJMSF040H05+ GAAATGGGGAAAGATCTGACCGAAGATCAAAAG
rJMSF026E15+ TCTGACCGAAGATCAAAAG
JMFN013A09- AAGATCTGACCGAAGATCAAAAG
rJMFF031H10+ GAAATGGGGAAAGATCTGACCGAAGATCAAAAG
____________________________________________________________
consensus NNGGAGAGAGAGGAGAGAGAGAGAGAGGAAATGGGGAAAGATCTGACCGAAGATCAAAAG
. : . : . : . : . : . :
JMFF042D20- TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
rJMSF040H05+ TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
rJMFF014B01+ GCGTTTACGCTNTTCGACACTGACGGCGACGGCAAGATTGCGCCG
rJMSF026E15+ TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
JMFN013A09- TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
rJMFF031H10+ TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
____________________________________________________________
consensus TCCTCGATGAAGGAGGCGTTTACGCTCTTCGACACTGACGGCGACGGCAAGATTGCGCCG
. : . : . : . : . : . :
JMFF042D20- TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
rJMSF040H05+ TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
rJMFF014B01+ TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
rJMSF026E15+ TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
JMFN013A09- TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
rJMFF031H10+ TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
____________________________________________________________
consensus TCGGAGCTGGGGATTTTGATGAGGTCTCTCGGCGGGAACCCGACCCAGGCCCAGCTCAAA
. : . : . : . : . : . :
JMFF042D20- TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
rJMSF040H05+ TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
rJMFF014B01+ TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
rJMSF026E15+ TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
JMFN013A09- TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
JMFN031N22- CGAAGAGAAGCTCACCTCTCCCTTCGATTTC-AACGCTTCATCGACCTA
rJMFF031H10+ TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
____________________________________________________________
consensus TCCATCGTCGCCGAAGAGAAGCTCACCTCTCCCTTCGATTTCAAACGCTTCATCGACCTA
. : . : . : . : . : . :
JMFF042D20- ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
rJMSF040H05+ ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
rJMFF014B01+ ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
rJMSF026E15+ ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
JMFN013A09- ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
JMFN031N22- ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCATCTCCGAGACGCATTCAAGGTC
rJMFF031H10+ ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
rJMFF042D20+ CAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
____________________________________________________________
consensus ATGTCGAAGCACCTCAAGCCCGAGCCCTTCGACCGCCAGCTCCGAGACGCATTCAAGGTC
. : . : . : . : . : . :
JMFF042D20- CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
rJMSF040H05+ CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
rJMFF014B01+ CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
rJMSF026E15+ CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
JMFN013A09- CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
JMFN031N22- CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
rJMFF031H10+ CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
rJMFF042D20+ CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
____________________________________________________________
consensus CTCGACAAGGAGGGCTCGGGCTTTGTTGTCGTTTCAGATCTCAAGCACATCCTCACCAGC
. : . : . : . : . : . :
JMFF042D20- ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
rJMSF040H05+ ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
rJMFF014B01+ ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
rJMSF026E15+ ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
JMFN013A09- ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
JMFN031N22- ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
rJMFF031H10+ ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
rJMFF042D20+ ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
____________________________________________________________
consensus ATCGGCGAGAAGCTCGAGCCCGCGGAGTTTGATGAGTGGATCCGCGAGGTCGATGCCGGA
. : . : . : . : . : . :
JMFF042D20- TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
rJMSF040H05+ TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
rJMFF014B01+ TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
rJMSF026E15+ TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
JMFN013A09- TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
JMFN031N22- TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
rJMFF031H10+ TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
rJMFF042D20+ TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
____________________________________________________________
consensus TCCGGCGGCAAGATCCGCTACGAGGACTTCATTGCTCGCATGGTTGCCAAGTGATATCCT
. : . : . : . : . : . :
JMFF042D20- CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
rJMSF040H05+ CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
rJMFF014B01+ CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
rJMSF026E15+ CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
JMFN013A09- CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
JMFN031N22- CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
rJMFF031H10+ CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
rJMFF042D20+ CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
____________________________________________________________
consensus CCTGTGGCAGCATACACCATTGGTTGTATCTAGATGAAGTGAGGTCAATGTGCTCCTTCA
. : . : . : . : . : . :
JMFF042D20- TCTTATAGTCTAGTATTTTGTTTGGA
rJMSF040H05+ TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
rJMFF014B01+ TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
rJMSF026E15+ TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
JMFN013A09- TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
JMFN031N22- TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
rJMFF031H10+ TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
rJMFF042D20+ TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
____________________________________________________________
consensus TCTTATAGTCTAGTATTTTGTTTGGATGCTGAAGGGCGTTTTAATTAACTGCCTTCATGA
. : . : . : . : . : . :
rJMSF040H05+ ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
rJMFF014B01+ ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
rJMSF026E15+ ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
JMFN013A09- ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTG
JMFN031N22- ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
rJMFF031H10+ ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
rJMFF042D20+ ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
____________________________________________________________
consensus ATTTTTTTCTTCTGTCGGTGAACATTTTGTGGGGGGTCGTGTATTTGGTTCATAATTGTC
. : . : . : . : . : . :
rJMSF040H05+ TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
rJMFF014B01+ TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
rJMSF026E15+ TAAACCCTTCACCTTTAGAATTGAGAAAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
JMFN031N22- TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTTTTTTTTATTTGGAA
rJMFF031H10+ TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
rJMFF042D20+ TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
____________________________________________________________
consensus TAAACCCTTCACCTTTAGAATTGAG-AAGTACTGTTTGCAAGTTTGTTTTTTATTTGGAA
. : . : . : . : . : . :
rJMSF040H05+ CTCATAATTCCTGTGTACAGTTTCAT
rJMFF014B01+ CTCATAATTCCTGTGTACAGTTTCATTGAAACTCGAAGACCAGTT
rJMSF026E15+ CTCATAA
JMFN031N22- CTCATAATTCCTGTGTACAGTTTCATTGAAA
rJMFF031H10+ CTCATAATTCCTGTGTACAGTTTCATTGAAACTCGAAGACCAGTT
rJMFF042D20+ CTCATAATTCCTGTGTACAGTTTCATTGAAACTCGAAGACCAGTTATTTATATTCCTTGT
____________________________________________________________
consensus CTCATAATTCCTGTGTACAGTTTCATTGAAACTCGAAGACCAGTTATTTATATTCCTTGT