Contig 008294:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008F17Sequence471009133 (3)gb|KDP41450.1|2e-25hypothetical protein JCGZ_15857 [Jatropha curcas]794008294 (5)gb|KDO81095.1|4e-51hypothetical protein CISIN_1g035790mg [Citrus sinensis]
JMFF022K04Sequence538008294 (5)ref|XP_006338135.1|1e-20PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t
JMFF032A14Sequence457008294 (5)ref|XP_006338135.1|2e-13PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t
JMFF039M03Sequence396008294 (5)gb|KDO81095.1|1e-69hypothetical protein CISIN_1g035790mg [Citrus sinensis]655008294 (5)ref|XP_006338135.1|4e-20PREDICTED: transport inhibitor response 1-like protein-like, partial [Solanum t

Alignment

This contig is upended


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JMFF039M03-                 CCGGGGCGACACAGGCCCGACTACCTGACAGGTAAACCGATGGATGAAGGGTTC
                      ____________________________________________________________
consensus                   CCGGGGCGACACAGGCCCGACTACCTGACAGGTAAACCGATGGATGAAGGGTTC
 
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JMFF039M03-           GGGGCTATTGTTAAGAACTGTAAGAGCCTTACACGCCTCGCTTTATCTGGCCTATTGACC
                      ____________________________________________________________
consensus             GGGGCTATTGTTAAGAACTGTAAGAGCCTTACACGCCTCGCTTTATCTGGCCTATTGACC
 
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JMFF039M03-           GACCAGGCTTTCGGTTATATTGGACAATACGGGAAATCGTTGCGCACTTTGTCAGTTGCG
rJMFF008F17+                                              TCGTTGCGCACTTTGTCAGTTGCG
                      ____________________________________________________________
consensus             GACCAGGCTTTCGGTTATATTGGACAATACGGGAAATCGTTGCGCACTTTGTCAGTTGCG
 
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JMFF039M03-           TTTGCTGGAGGCAGTGACACGGGGCTAAAGCACGTGCTCGATGGCTGCCCCAAGCTGCAG
rJMFF008F17+          TTTGCTGGAGGCAGTGACACGGGGCTAAAGCACGTGCTCGATGGCTGCCCCAAGCTGCAG
                      ____________________________________________________________
consensus             TTTGCTGGAGGCAGTGACACGGGGCTAAAGCACGTGCTCGATGGCTGCCCCAAGCTGCAG
 
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JMFF039M03-           AAGCTCNAAGTCAGGGACAGTCCGTTCGGGGATTTGGCTTTGCGTGCTGGTTTGCACCGT
rJMFF008F17+          AAGCTCGAAGTCAGGGACAGTCCGTTCGGGGATTTGGCTTTGCGTGCTGGTTTGCACCGT
                      ____________________________________________________________
consensus             AAGCTCGAAGTCAGGGACAGTCCGTTCGGGGATTTGGCTTTGCGTGCTGGTTTGCACCGT
 
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JMFF039M03-           TTTTACAACATGAGGTTTCTCTGGATGTCGTCTTGCAAGGCAAGTCGGGAATGTTGTGAG
rJMFF022K04+               CAACATGAGNTTTCTCTGGATGTCGTCTTGCAAGGCAAGTCGGGAATGTTGTGAG
rJMFF032A14+                                             CAAGGCAAGTCGGGAATGTTGTGAG
rJMFF008F17+          TTTTACAACATGAGGTTTCTCTGGATGTCGTCTTGCAAGGCAAGTCGGGAATGTTGTGAG
rJMFF039M03+               CAACATGAGGTTTCTCTGGATGTCGTCTTGCAAGGCAAGTCGGGAATGTTGTGAG
                      ____________________________________________________________
consensus             TTTTACAACATGAGGTTTCTCTGGATGTCGTCTTGCAAGGCAAGTCGGGAATGTTGTGAG
 
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JMFF039M03-           AAGATTGCTCGGGAATTGCCACGCCTAGTGGTGGAAGTGATA                  
rJMFF022K04+          AAGATTGCTCGGGAATTGCCACGCCTAGTGGTGGAAGTGATAGATAGGGACGAGGAAGGG
rJMFF032A14+          AAGATTGCTCGGGAATTGCCACGCNTAGTGGTGGAAGTGATAGATAGGGACGAGGAAGGG
rJMFF008F17+          AAGATTGCTCGGGAATTGCCACGCCTAGTGGTGGAAGTGATAGATAGGGACGAGGAAGGG
rJMFF039M03+          AAGATTGCTCGGGAATTGCCACGCCTAGTGGTGGAAGTGATAGATAGGGACGAGGAAGGG
                      ____________________________________________________________
consensus             AAGATTGCTCGGGAATTGCCACGCCTAGTGGTGGAAGTGATAGATAGGGACGAGGAAGGG
 
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rJMFF022K04+          ATGGATAGGAACAACGAGGTTGATACTTTATACATGTACCGGTCCCTCGATGGGCCAAGA
rJMFF032A14+          ATGGATAGGAACAACGAGGTTGATACTTTATACATGTACCGGTCCCTCGATGGGCCAAGA
rJMFF008F17+          ATGGATAGGAACAACGAGGTTGATACTTTATACATGTACCGGTCCCTCGATGGGCCAAGA
rJMFF039M03+          ATGGATAGGAACAACGAGGTTGATACTTTATACATGTACCGGTCCCTCGATGGGCCAAGA
                      ____________________________________________________________
consensus             ATGGATAGGAACAACGAGGTTGATACTTTATACATGTACCGGTCCCTCGATGGGCCAAGA
 
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rJMFF022K04+          ACCGATGCACCCAAGTTTGTGCATATCTTGTGATGTTAGAAGAGACCGAGTTTTGCCCCG
rJMFF032A14+          ACCGATGCACCCAAGTTTGTGCATATCTTGTGATGTTAGAAGAGACCGAGTTTTGCCCCG
rJMFF008F17+          ACCGATGCACCCAAGTTTGTGCATATCTTGTGATGTTAGAAGAGACCGAGTTTTGCCCCG
rJMFF039M03+          ACCGATGCACCCAAGNTTGTGCATATCTTGTGATGTTAGAAGAGACCGAGTTTTGCCCCG
                      ____________________________________________________________
consensus             ACCGATGCACCCAAGTTTGTGCATATCTTGTGATGTTAGAAGAGACCGAGTTTTGCCCCG
 
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rJMFF022K04+          AATATGTTCCTGGAGAGTTGGCTTTCAGCAAACCGCGCATTCAAGTAAGGGACGGGATGG
rJMFF032A14+          AATATGTTCCTGGAGAGTTGGCTTTCAGCAAACCGCGCATTCAAGTAAGGGACGGGATGG
rJMFF008F17+          AATATGTTCCTGGAGAGTTGGCTTTCAGCAAACCGCGCATTCAAGTAAGGGACGGGATGG
rJMFF039M03+          AATATGTTCCTGGAGAGTTGGCTTTCAGCAATCCGCGCATTCAAGTAAGGGACGGGATGG
                      ____________________________________________________________
consensus             AATATGTTCCTGGAGAGTTGGCTTTCAGCAAACCGCGCATTCAAGTAAGGGACGGGATGG
 
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rJMFF022K04+          TTTTAAGGTTTACTCGTCGTGATTGTTATTCTTCCTCTCTGCCAAACATAAACGAGGCCA
rJMFF032A14+          TTTTAAGGTTTACTCGTCGTGATTGTTATTCTTCCTCTCTGCCAAACATAAACGAGGCCA
rJMFF008F17+          TTTTAAGGTTTACTCGTCGTGATTGTTATTCTTCCTCTCTGCCAAACATAAACGAGGCCA
rJMFF039M03+          TTNTAAGGTNTACTCGTCGTGATTGTTATTCTTCCTCCCTGCCAAACATAAACGAGGCCA
                      ____________________________________________________________
consensus             TTTTAAGGTTTACTCGTCGTGATTGTTATTCTTCCTCTCTGCCAAACATAAACGAGGCCA
 
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rJMFF022K04+          GCTAGCTAGCTTACAGATTTTGCTGCAACCCCATCGTGATTCTTCTTCTTCTTTCCCGCT
rJMFF032A14+          GCTAGCTAGCTTACAGATTTTGCTGCAACCCCATCGTGATTCTTCTTCTTCTTTCCCGCT
rJMFF008F17+          GCTAGCTAGCTTACAGATTTTGCTGCAACCCCATCGTGATTCTTCTTCTTCTTTCCCGCT
rJMFF039M03+          GCTAGCTAGCTTACAGATTTTGCTGCAACCCCATCGTGATTCTTCTTNTTCTTTCCCGCT
                      ____________________________________________________________
consensus             GCTAGCTAGCTTACAGATTTTGCTGCAACCCCATCGTGATTCTTCTTCTTCTTTCCCGCT
 
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rJMFF022K04+          GTTTATTTCGAATAAAGAAACCATCGACATTCAAAGTGAACCGAGATGTTTGCCCCTCGC
rJMFF032A14+          GTTTATTTCGAATAAAGAAACCATCGACATTCAAAGTGAACCGAGATGTTTGCCCCTCGC
rJMFF008F17+          GTTTATTTCGAATAAAGAAACCATCGACATTCAAAGTGAACCGAGATGTTTGCCCCTCGC
rJMFF039M03+          GTTTATTTNGAATAAAGAAACCATCGACATTCAAAGTGAACCGAGATGTTTGCCCCTCGC
                      ____________________________________________________________
consensus             GTTTATTTCGAATAAAGAAACCATCGACATTCAAAGTGAACCGAGATGTTTGCCCCTCGC
 
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rJMFF022K04+          GATATTCTCTTGTAGTGTGTGTCCTGNAGAATTNGAGATTCAGAAGCAAAAAGCTCAGAA
rJMFF032A14+          GATATTCTCTTG                                                
rJMFF008F17+          GATATTCTCTTGAAGTGTGTGTCCTGGAGAATTCGAGATTCAGAAGCAAAAAGCTCAGAA
rJMFF039M03+          GATATTCTCTTGAAGTGTGTGTCCTGGAGAATTCGAGATTCAGAAGCAAAAAGCTCAGAA
                      ____________________________________________________________
consensus             GATATTCTCTTGAAGTGTGTGTCCTGGAGAATTCGAGATTCAGAAGCAAAAAGCTCAGAA
 
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rJMFF022K04+          CAA                                                         
rJMFF008F17+          CAATCTTTTTGCTTATATTAGTTGAATTGAGCTTCTCTGCTCATCTTTTATGCATTTTTA
rJMFF039M03+          CAATCTTTTTGCTTATATTAGTTGAATTGAGCTTCTCTGCTCATCTTTTATGCATTNTTA
                      ____________________________________________________________
consensus             CAATCTTTTTGCTTATATTAGTTGAATTGAGCTTCTCTGCTCATCTTTTATGCATTTTTA
 
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rJMFF008F17+          GCTGAGAATTTGAACTGTTAGTAGGCAATATTTACTGCCAGGACAATACT          
rJMFF039M03+          GCTGAGAATNTGAACTGTTAGTAGGCAATATTTACTGCCAGGACAATACTGTTTAATCAG
                      ____________________________________________________________
consensus             GCTGAGAATTTGAACTGTTAGTAGGCAATATTTACTGCCAGGACAATACTGTTTAATCAG