Contig 008291:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038O02Sequence757008291 (4)emb|CDP00072.1|8e-62unnamed protein product [Coffea canephora]
JMSF045D01Sequence551008291 (4)emb|CDP00072.1|3e-67unnamed protein product [Coffea canephora]
JMSF046O06Sequence773008291 (4)emb|CDP00072.1|1e-90unnamed protein product [Coffea canephora]611008291 (4)emb|CDP00072.1|2e-41unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF045D01- GGAACAGAACTTTCTTTCCTTTTATCTCTTC
                      ____________________________________________________________
consensus GGAACAGAACTTTCTTTCCTTTTATCTCTTC
 
. : . : . : . : . : . :
JMSF045D01- CTCTCTCTTGCCCTCTTGGCCCAAACCCCCAAACCATGTGATTGTGTACATTGAAATGCC
                      ____________________________________________________________
consensus CTCTCTCTTGCCCTCTTGGCCCAAACCCCCAAACCATGTGATTGTGTACATTGAAATGCC
 
. : . : . : . : . : . :
JMSF045D01- TATAAATCTCTGATTTCCTCTCTATAGCGTCTCTTTCGGCGCCCTAGAGCCTTCTTTTCT
                      ____________________________________________________________
consensus TATAAATCTCTGATTTCCTCTCTATAGCGTCTCTTTCGGCGCCCTAGAGCCTTCTTTTCT
 
. : . : . : . : . : . :
JMSF045D01- TTCCTGCTCTCTCTGTCTAAAATCTCATCTGCCATGGCTTCAGCTTCGCCCTCCCAAGCC
                      ____________________________________________________________
consensus TTCCTGCTCTCTCTGTCTAAAATCTCATCTGCCATGGCTTCAGCTTCGCCCTCCCAAGCC
 
. : . : . : . : . : . :
JMSF045D01- AGCCTTCTTCTCCAAAAACAACTTAGAGATCTCTGCAAAAACCCCGTTGATGGTTTCTCA
JMSF046O06- CTCCAGAAACAACTCAAAGATCTTTGCAAAAAGCCTGTTGATGGATTTTCA
                      ____________________________________________________________
consensus AGCCTTCTTCTCCAGAAACAACTTAGAGATCTTTGCAAAAAGCCTGTTGATGGTTTTTCA
 
. : . : . : . : . : . :
JMSF045D01- GCTGGCTTGGTGGACGAAAACAATCTTTTCGAATGGAGCGTAACGATTATTGGACCTCCT
JMSF046O06- GCTGGTTTGGTTGATGAGAGCAATCTTTTCGAATGGAGCGTTACAGTTATTGGACCTCCT
                      ____________________________________________________________
consensus GCTGGTTTGGTTGATGAGAGCAATCTTTTCGAATGGAGCGTTACGGTTATTGGACCTCCT
 
. : . : . : . : . : . :
JMSF045D01- GATACTTTGTACGAAGGGGGCTTTTTCAATGCTATAATGAGTTTTCCTCAAAATTACCCA
JMSF046O06- GATACATTATATGAAGGAGTTTTTTTTAATGCGATTATGAGTTTTCCTCAAAATTACCCG
rJMFF038O02+ ATGAGTTTTCCTCAAAATTACCCG
                      ____________________________________________________________
consensus GATACTTTGTATGAAGGGGTTTTTTTTAATGCTATTATGAGTTTTCCTCAAAATTACCCG
 
. : . : . : . : . : . :
JMSF045D01- AACAGTCCTCCTGCTATGAGATTTACCTCAGAGATCTGGCATCCTAATGTATACACCGAC
JMSF046O06- AATAGTCCCCCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
rJMSF046O06+ TAATGTATACACCGAT
rJMFF038O02+ AATAGTCCACCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
                      ____________________________________________________________
consensus AATAGTCCTCCCTCGGTGAGATTTACCACAGAGATCTGGCATCCTAATGTATACACCGAT
 
. : . : . : . : . : . :
JMSF045D01- GGCAAGGTTTGCATTTCAATTCTTCATCCCCCTGGTGATGATCCAAATGGTTATGAGCTT
JMSF046O06- GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
rJMSF046O06+ GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
rJMFF038O02+ GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
                      ____________________________________________________________
consensus GGCAAGGTTTGCATCTCAATTCTTCATCCTCCCGGTGACGATCCAAATGGATATGAACTT
 
. : . : . : . : . : . :
JMSF045D01- GCTAGTGAGCGTTGGTCACCTGTCCATACGGT
JMSF046O06- GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
rJMSF046O06+ GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
rJMFF038O02+ GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
                      ____________________________________________________________
consensus GCTAGTGAGCGCTGGTCACCTGTCCATACGGTTGAAAGTATAGTTTTGAGCATCATATCA
 
. : . : . : . : . : . :
JMSF046O06- ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
rJMSF046O06+ ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
rJMFF038O02+ ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
                      ____________________________________________________________
consensus ATGCTTTCAAGCCCTAATGATGAGTCCCCGGCAAATGTTGAAGCTGCTAAGGAATGGCGG
 
. : . : . : . : . : . :
JMSF046O06- GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
rJMSF046O06+ GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
rJMFF038O02+ GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
                      ____________________________________________________________
consensus GAGAACAGGGAGGGATTCAAGAAAAAGGTGAGCCGCTGTGTAAGGCGGTCACAAGAAATG
 
. : . : . : . : . : . :
JMSF046O06- CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
rJMSF046O06+ CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
rJMFF038O02+ CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
                      ____________________________________________________________
consensus CTGTAAACGTGCAGCCCGTGAATGCAAGTTCATGCTCCAATCCGAACGCGTTGATATGGC
 
. : . : . : . : . : . :
JMSF046O06- GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
rJMSF046O06+ GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
rJMFF038O02+ GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
                      ____________________________________________________________
consensus GAGGAACGATGCCCTAGCTAGCTAGTAACCGGGTTCTTTCTATTGGCTGCAAATCGGTAC
 
. : . : . : . : . : . :
JMSF046O06- CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCT
rJMSF046O06+ CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
rJMFF038O02+ CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
                      ____________________________________________________________
consensus CCCGTGTTTCGTTGCATCAAGATCATGCATTCTATTAACTGCTTCTGAAAGGTAGTTTTT
 
. : . : . : . : . : . :
rJMSF046O06+ AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
rJMFF038O02+ AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
                      ____________________________________________________________
consensus AAGGTGAAATTCCGACAGGATTTTTGTCTGGAAACTTGGTTAGTTTCATTCACTTCAGGT
 
. : . : . : . : . : . :
rJMSF046O06+ GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
rJMFF038O02+ GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
                      ____________________________________________________________
consensus GTTGATTGGTTGGTTACCTTCTCTGTATGTACTTCTCAAAAGTCTAGGTTTGGTAGTGTG
 
. : . : . : . : . : . :
rJMSF046O06+ TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTC
rJMFF038O02+ TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTCAAGGAACTGTTC
                      ____________________________________________________________
consensus TATGCAACATTGTTGGTTGCTGGATTTTGTACTTTTGTTATATTGTTCAAGGAACTGTTC
 
. : . : . : . : . : . :
rJMFF038O02+ ATTAAACAATGCCACCGGAATTTATGTTTGTTTTTCAACATAGTATTAATGCACCAAATA
                      ____________________________________________________________
consensus ATTAAACAATGCCACCGGAATTTATGTTTGTTTTTCAACATAGTATTAATGCACCAAATA