Contig 008290:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038J17Sequence530004611 (4)ref|XP_010260115.1|3e-15PREDICTED: BTB/POZ domain-containing protein At5g60050 [Nelumbo nucifera]775008290 (5)ref|XP_010092990.1|4e-102hypothetical protein L484_007171 [Morus notabilis] gb|EXB53228.1| hypothetical p
JMFN006L05Sequence532008290 (5)ref|XP_002281741.1|3e-65PREDICTED: BTB/POZ domain-containing protein At5g60050 [Vitis vinifera] ref|XP_
JMSF021E11Sequence609004611 (4)ref|XP_006365150.1|6e-44PREDICTED: BTB/POZ domain-containing protein At5g60050-like [Solanum tuberosum]760008290 (5)ref|XP_002281741.1|5e-117PREDICTED: BTB/POZ domain-containing protein At5g60050 [Vitis vinifera] ref|XP_
JMSF023F15Sequence664004611 (4)ref|XP_006365150.1|5e-48PREDICTED: BTB/POZ domain-containing protein At5g60050-like [Solanum tuberosum]771008290 (5)ref|XP_002281741.1|8e-111PREDICTED: BTB/POZ domain-containing protein At5g60050 [Vitis vinifera] ref|XP_
JMSF028N21Sequence605004611 (4)ref|XP_006365150.1|1e-42PREDICTED: BTB/POZ domain-containing protein At5g60050-like [Solanum tuberosum]704008290 (5)ref|XP_010092990.1|3e-99hypothetical protein L484_007171 [Morus notabilis] gb|EXB53228.1| hypothetical p

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF021E11+ TTCTCGGTTGCTTAGAGAAGAC
                      ____________________________________________________________
consensus TTCTCGGTTGCTTAGAGAAGAC
 
. : . : . : . : . : . :
rJMSF021E11+ GTCCCTGACAATACTATTTCGAGGGACATGCTCTATAATCTTTGTCACGGGTGTCTTAAT
rJMSF023F15+ GGACATGCTCTATAATCTTTGTCACGGGTGTCTTAAT
                      ____________________________________________________________
consensus GTCCCTGACAATACTATTTCGAGGGACATGCTCTATAATCTTTGTCACGGGTGTCTTAAT
 
. : . : . : . : . : . :
rJMSF021E11+ TCGTTATTACTCTGTGCGTCCGAGGCAACGTGTGTGGATGAAAGCGGGAAGGATCGGGGA
rJMSF028N21+ CGAGGCAACGTGTGTGGATGAAAGCGGGAAGGATCGGGGA
rJMSF023F15+ TCGTTATTACTCTGTGCGTCCGAGGCAACGTGTGTGGATGAAAGCGGGAAGGATCGGGGA
rJMFF038J17+ ATTACTCTGTGCGTCCGAGGCAACGTGTGTGGATGAAAGCGGGAAGGATCGGGGA
                      ____________________________________________________________
consensus TCGTTATTACTCTGTGCGTCCGAGGCAACGTGTGTGGATGAAAGCGGGAAGGATCGGGGA
 
. : . : . : . : . : . :
rJMSF021E11+ GTCGTGATGGGGGAGATAGCTCGCGAGGCGGATAACGTTCAGTGGATCGTTGATATCCTG
rJMSF028N21+ GTCGTGATGGGGGAGATAGCTCGCGAGGCGGATAACGTTCAGTGGATCGTTGATATCCTG
rJMSF023F15+ GTCGTGATGGGGGAGATAGCTCGCGAGGCGGATAACGTTCAGTGGATCGTTGATATCCTG
rJMFF038J17+ GTCGTGATGGGGGAGATAGCTCGCGAGGCGGATAACGTTCAGTGGATCGTTGATATCCTG
                      ____________________________________________________________
consensus GTCGTGATGGGGGAGATAGCTCGCGAGGCGGATAACGTTCAGTGGATCGTTGATATCCTG
 
. : . : . : . : . : . :
rJMSF021E11+ ATTGAGAGGAAGATGGGGGACGAATTTGTGGACTTATGGGCGGACCAAAAGGAGCTTGCG
rJMSF028N21+ ATTGAGAGGAAGATGGGGGACGAATTTGTGGACTTATGGGCGGACCAAAAGGAGCTTGCG
rJMSF023F15+ ATTGAGAGGAAGATGGGGGACGAATTTGTGGACTTATGGGCGGACCAAAAGGAGCTTGCG
rJMFF038J17+ ATTGAGAGGAAGATGGGGGACGAATTTGTGGACTTATGGGCGGACCAAAAGGAGCTTGCG
                      ____________________________________________________________
consensus ATTGAGAGGAAGATGGGGGACGAATTTGTGGACTTATGGGCGGACCAAAAGGAGCTTGCG
 
. : . : . : . : . : . :
rJMSF021E11+ AGTCTTCATTCCAAAATTCCCACCATGTATAGACACGAAATTAGCAGGATCACGGCACAG
rJMSF028N21+ AGTCTTCATTCCAAAATTCCCACCATGTATAGACACGAAATTAGCAGGATCACGGCACAG
rJMSF023F15+ AGTCTTCATTCCAAAATTCCCACCATGTATAGACACGAAATTAGCAGGATCACGGCACAG
JMFN006L05- ACAG
rJMFF038J17+ AGTCTTCATTCCAAAATTCCCACCATGTATAGACACGAAATTAGCAGGATCACGGCACAG
                      ____________________________________________________________
consensus AGTCTTCATTCCAAAATTCCCACCATGTATAGACACGAAATTAGCAGGATCACGGCACAG
 
. : . : . : . : . : . :
rJMSF021E11+ CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
rJMSF028N21+ CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
rJMSF023F15+ CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
JMFN006L05- CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
rJMFF038J17+ CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
                      ____________________________________________________________
consensus CTCTGTGTGGCAATTGGTCGAGGGCATTTATTGGTGCCAAAAGACGCACGATTCTCTTTG
 
. : . : . : . : . : . :
rJMSF021E11+ TTATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
rJMSF028N21+ TNATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
rJMSF023F15+ TTATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
JMFN006L05- TTATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
rJMFF038J17+ TTATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
                      ____________________________________________________________
consensus TTATCGACGTGGCTGGAAGCACTCTATGAGGACTTCGGGTGGATGAGGAGAGCGTGTAGA
 
. : . : . : . : . : . :
rJMSF021E11+ TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
rJMSF028N21+ TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
rJMSF023F15+ TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
JMFN006L05- TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
rJMFF038J17+ TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
                      ____________________________________________________________
consensus TCGATCGATAAGACGCTAGTCGAGGATGGATTGAGCCAAACGATTCTTACCCTTCCGTTG
 
. : . : . : . : . : . :
rJMSF021E11+ CCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
rJMSF028N21+ CCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
rJMSF023F15+ CCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
JMFN006L05- TCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
rJMFF038J17+ CCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
                      ____________________________________________________________
consensus CCCCAACAACAAGCAATCATGCTTAATTGGTTCGACCGGTTTCTTAATAAGGGCGACGAT
 
. : . : . : . : . : . :
rJMSF021E11+ TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
rJMSF028N21+ TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
rJMSF023F15+ TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
JMFN006L05- TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
rJMFF038J17+ TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
                      ____________________________________________________________
consensus TGCCCCAACATTCAGAAAGCATTTCAAGTCTGGTGGAGACGGGCTTTTATTAAGCAGTAT
 
. : . : . : . : . : . :
rJMSF021E11+ GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
rJMSF028N21+ GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
rJMSF023F15+ GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
JMFN006L05- GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
rJMFF038J17+ GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
                      ____________________________________________________________
consensus GTGCCCGAGTCTCAGCTACAGATAGCTCTTTGTGATTACACAAATTGATGGTACGTTCTA
 
. : . : . : . : . : . :
rJMSF021E11+ TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
rJMSF028N21+ TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
rJMSF023F15+ TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
JMFN006L05- TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
rJMFF038J17+ TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
                      ____________________________________________________________
consensus TCGTCTTTTCGAATTAGACAAATGTACATATAAGATGATATTCTTTTTCTGTTTATCCGT
 
. : . : . : . : . : . :
rJMSF021E11+ ACCATTATTTGTTTT
rJMSF028N21+ ACCATTATTTGTTTTTTCCACTGAAATTATTCATAAATTGTAAGAGAATGAATATATAAG
rJMSF023F15+ ACCATTATTTGTTTTTTCCACTGAAATTATTCATAAATTGTAAGAGAATGAATATATAAG
JMFN006L05- ACCATTATTTGTTTTTTCCACTGAAATTATTCATAAATTGTAAGAGAATGAATATATAAG
rJMFF038J17+ ACCATTATTTGTTTTTTCCACTGAAATTATTCATAAATTGTAAGAGAATGAATATATAAG
                      ____________________________________________________________
consensus ACCATTATTTGTTTTTTCCACTGAAATTATTCATAAATTGTAAGAGAATGAATATATAAG
 
. : . : . : . : . : . :
rJMSF028N21+ TACT
rJMSF023F15+ TACTTTTGTGT
JMFN006L05- TACTTTTGTGTTGCCATTCAATCATGAAAAAGACAAATAAGTATCTTT
rJMFF038J17+ TACTTTTGTGTTGCCATTCAATCATGAAAAAGACAAATAAGTATCTTTATTACAGTACTA
                      ____________________________________________________________
consensus TACTTTTGTGTTGCCATTCAATCATGAAAAAGACAAATAAGTATCTTTATTACAGTACTA