Contig 008279:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F01Sequence512010583 (4)ref|XP_009768440.1|216PREDICTED: uncharacterized protein LOC104219446 [Nicotiana sylvestris]680008279 (4)ref|XP_011087123.1|4e-33PREDICTED: uncharacterized protein LOC105168678 isoform X2 [Sesamum indicum]
JMFF036H16Sequence510010583 (4)ref|XP_009768440.1|216PREDICTED: uncharacterized protein LOC104219446 [Nicotiana sylvestris]683008279 (4)ref|XP_011087123.1|5e-34PREDICTED: uncharacterized protein LOC105168678 isoform X2 [Sesamum indicum]
JMSF007I01Sequence374010583 (4)ref|XP_009768440.1|125PREDICTED: uncharacterized protein LOC104219446 [Nicotiana sylvestris]784008279 (4)ref|XP_009603394.1|279PREDICTED: uncharacterized protein LOC104098381 [Nicotiana tomentosiformis]
JMSF034N15Sequence704017885ref|XP_009768440.1|263PREDICTED: uncharacterized protein LOC104219446 [Nicotiana sylvestris]673008279 (4)ref|XP_009768440.1|268PREDICTED: uncharacterized protein LOC104219446 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF007I01+                                                                    AG
                      ____________________________________________________________
consensus                                                                       AG
 
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rJMSF007I01+          AGTAAAAAACAGAATCTGGCCCAATGTTGCCTGTGCAACAAAGGTGCAATATCCTTCCTC
                      ____________________________________________________________
consensus             AGTAAAAAACAGAATCTGGCCCAATGTTGCCTGTGCAACAAAGGTGCAATATCCTTCCTC
 
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rJMSF034N15+                                                         CTGAAGGAGCACC
rJMSF007I01+          TGGTCCTTCTGGAAGAGGCCGGTTTGGTAATAGGATTTCTGAACCTACTGAAGGAGCACC
                      ____________________________________________________________
consensus             TGGTCCTTCTGGAAGAGGCCGGTTTGGTAATAGGATTTCTGAACCTACTGAAGGAGCACC
 
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rJMSF034N15+          GTTTGATCCATTAATTGGG-GGAAAGTAAGGACCAGATGGCCTGATGACAATAATTTCTA
rJMSF007I01+          GTTTGATCCATTAATTGGGAGGAAAGTAAGGACCAGATGGCCTGATGACAATAATTTCTA
                      ____________________________________________________________
consensus             GTTTGATCCATTAATTGGGAGGAAAGTAAGGACCAGATGGCCTGATGACAATAATTTCTA
 
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rJMSF034N15+          TGAGGCTGTCATAACCAATTATAATCCAGCTGATGGACACCATGCTCTTGTTTATGACAT
rJMSF007I01+          TGAGGCTGTCATAACCAATTATAATCCAGCTGATGGACACCATGCTCTTGTTTATGACAT
                      ____________________________________________________________
consensus             TGAGGCTGTCATAACCAATTATAATCCAGCTGATGGACACCATGCTCTTGTTTATGACAT
 
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rJMSF034N15+          TGGCACTGCAAATGAGACCTGGGAATGGGTAAACCTTTCAGAGATTTCTCCTGAAGATAT
rJMSF007I01+          TGGCACTGCAAATGAGACCTGGGAATGGGTAAACCTTTCAGAGATTTCTCCTGAAGATAT
rJMFF014F01+                                               TCAGAGATTTCTCNTGAAGATAT
rJMFF036H16+                                               TCAGAGATTTCTCCTGAAGATAT
                      ____________________________________________________________
consensus             TGGCACTGCAAATGAGACCTGGGAATGGGTAAACCTTTCAGAGATTTCTCCTGAAGATAT
 
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rJMSF034N15+          ACAATGGGACGGTGGACCAGGATGCCATGGTGATAGATCGGGAGGCCATGGTGATGGACC
rJMSF007I01+          ACAATGGGACGGTGGACCAGGATGCCATGGTGATAGATCGGGAGGCCATGGTGATGGACC
rJMFF014F01+          ACAATGGGACGGTGGACCAGGATGCCATGGTGATAGATCGGGAGGCCATGGTGATGGACC
rJMFF036H16+          ACAATGGGACGGTGGACCAGGATGCCATGGTGATAGATCGGGAGGCCATGGTGATGGACC
                      ____________________________________________________________
consensus             ACAATGGGACGGTGGACCAGGATGCCATGGTGATAGATCGGGAGGCCATGGTGATGGACC
 
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rJMSF034N15+          GGGAGGCCATGGTGTTAATAGAACTATTGGTCGTGATAGTGCTCCATGTGTGGGCAGAGG
rJMSF007I01+          GGGAGGCCATGGTGTTAATAGAACTATTGGTCGTGATAGTGCTCCATGTGTGGGCAGAGG
rJMFF014F01+          GGGAGGCCATGGTGTTAATAGAACTATTGGTCGTGATAGTGCTCCATGTGTGGGCAGAGG
rJMFF036H16+          GGGAGGCCATGGTGTTAATAGAACTATTGGTCGTGATAGTGCTCCATGTGTGGGCAGAGG
                      ____________________________________________________________
consensus             GGGAGGCCATGGTGTTAATAGAACTATTGGTCGTGATAGTGCTCCATGTGTGGGCAGAGG
 
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rJMSF034N15+          AAGGGGATTGACTAAAAAAGCTCAGTCCAGAAAGGAATTTCTACCATCACAGAATGGCAT
rJMSF007I01+          AAGGGGATTGACTAAAAAAGCTCAGTCCAGAAAGGAATTTCTACCATCACAGAATGGCAT
rJMFF014F01+          AAGGGGATTGACTAAAAAAGCTCAGTCCAGAAAGGAATTTCTACCATCACAGAATGGCAT
rJMFF036H16+          AAGGGGATTGACTAAAAAAGCTCAGTCCAGAAAGGAATTTCTACCATCACAGAATGGCAT
                      ____________________________________________________________
consensus             AAGGGGATTGACTAAAAAAGCTCAGTCCAGAAAGGAATTTCTACCATCACAGAATGGCAT
 
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rJMSF034N15+          AGGAAACAAAGGATCGGATGATATTCAATTACTGCACACTGATACATTAATTAAGGAGGT
rJMSF007I01+          AGGAAACAAAGGATCGGATGATATTCAATTACTGCACACTGATACATTAATTAAGGAGGT
rJMFF014F01+          AGGAAACAAAGGATCGGATGATATTCAATTACTGCACACTGATACATTAATTAAGGAGGT
rJMFF036H16+          AGGAAACAAAGGATCGGATGATATTCAATTACTGCACACTGATACATTAATTAAGGAGGT
                      ____________________________________________________________
consensus             AGGAAACAAAGGATCGGATGATATTCAATTACTGCACACTGATACATTAATTAAGGAGGT
 
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rJMSF034N15+          TGAGAGGATATATGGTGGCAGTCATCCTGATCCTGCGGAAATTGAGAAGGCC---AAACT
rJMSF007I01+          TGAGAGGATATATGGTGGCAGTCATCCTGATCCTGCGGAAATTGAGAAGGCCAAAAAACT
rJMFF014F01+          TGAGAGGATATATGGTGGCAGTCATCCTGATCCTGCGGAAATTGAGAAGGCCAAAAAACT
rJMFF036H16+          TGAGAGGATATATGGTGGCAGTCATCCTGATCCTGCGGAAATTGAGAAGGCCAAAAAACT
                      ____________________________________________________________
consensus             TGAGAGGATATATGGTGGCAGTCATCCTGATCCTGCGGAAATTGAGAAGGCCAAAAAACT
 
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rJMSF034N15+          GCTAAAGGAGCATGAGCAATCACTCGTGGACGCCATTTCAAGGCTTGGTGAGATTTCTGA
rJMSF007I01+          GCTAAAGGAGCATGAGCAATCACTCGTGGACGCCATTTCAAGGCTTGGTGAGATTTCTGA
rJMFF014F01+          GCTAAAGGAGCATGAGCAATCACTCGTGGACGCCATTTCAAGGCTTGGTGAGATTTCTGA
rJMFF036H16+          GCTAAAGGAGCATGAGCAATCACTCGTGGACGCCATTTCAAGGCTTGGTGAGATTTCTGA
                      ____________________________________________________________
consensus             GCTAAAGGAGCATGAGCAATCACTCGTGGACGCCATTTCAAGGCTTGGTGAGATTTCTGA
 
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rJMSF034N15+          TGGTGAAAGTG                                                 
rJMSF007I01+          TGGTGAAAGTG                                                 
rJMFF014F01+          TGGTGAAAGTGGTATATGACTACTAACTCAAATTATCACTGCTTTGTTTTTGTCATTTTA
rJMFF036H16+          TGGTGAAAGTGGTATATGACTACTAACTCAAATTATCACTGCTTTGTTTTTGTCATTTTA
                      ____________________________________________________________
consensus             TGGTGAAAGTGGTATATGACTACTAACTCAAATTATCACTGCTTTGTTTTTGTCATTTTA
 
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rJMFF014F01+          TCATATTATTTCTTCTACAGTGTCTATAAACTCCACTGTTTATATGAATGATTTTGTTCG
rJMFF036H16+          TCATATTATTTCTTCTACAGTGTCTATAAACTCCACTGTTTATATGAATGATTTTGTTCG
                      ____________________________________________________________
consensus             TCATATTATTTCTTCTACAGTGTCTATAAACTCCACTGTTTATATGAATGATTTTGTTCG
 
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rJMFF014F01+          AGATCTCTAAAGTATGTGGTGCTTGGGATGGATGCTCAAAGATCCTAAAGCCATCATAAT
rJMFF036H16+          AGATCTCTAAAGTATGTGGTGCTTGGGATGGATGCTCAAAGATCCTAAAGCCATCATAAT
                      ____________________________________________________________
consensus             AGATCTCTAAAGTATGTGGTGCTTGGGATGGATGCTCAAAGATCCTAAAGCCATCATAAT
 
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rJMFF014F01+          TTGGTGTTGTATCCACAGATTATGATGGCTTTAGATCTTGAACATGCATGTACAATTATA
rJMFF036H16+          TTGGTGTTGTATCCACAGATTATGATGGCTTTAGATCTTGAACATGCATGTACAATTATA
                      ____________________________________________________________
consensus             TTGGTGTTGTATCCACAGATTATGATGGCTTTAGATCTTGAACATGCATGTACAATTATA
 
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rJMFF014F01+          TTGTTGTGACTTGTATCTAGCCCTGGACATAATATTAGGATGAAAATAAAACAAAA    
rJMFF036H16+          TTGTTGTGACTTGTATCTAGCCCTGGACATAATATTAGGATGAAAATAAAACAAAATCCC
                      ____________________________________________________________
consensus             TTGTTGTGACTTGTATCTAGCCCTGGACATAATATTAGGATGAAAATAAAACAAAATCCC