Contig 008242:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027K17Sequence721008242 (5)emb|CBI34507.3|1e-35unnamed protein product [Vitis vinifera]
JMFF029D16Sequence577008242 (5)emb|CBI34507.3|1e-28unnamed protein product [Vitis vinifera]665004204 (6)ref|XP_009764745.1|1e-63PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris]
JMFF035K17Sequence509004204 (6)ref|XP_009764745.1|2e-61PREDICTED: uncharacterized protein At3g28850 [Nicotiana sylvestris]236008242 (5)
JMFF048H24Sequence427008242 (5)emb|CBI34507.3|5e-29unnamed protein product [Vitis vinifera]395004204 (6)ref|XP_006343832.1|5e-22PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform
JMSF009J08Sequence267008242 (5)gb|KDP25281.1|9e-15hypothetical protein JCGZ_20437 [Jatropha curcas]758004204 (6)ref|XP_006343832.1|5e-65PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1-like isoform

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF027K17+ TG
                      ____________________________________________________________
consensus TG
 
. : . : . : . : . : . :
JMFF029D16+ CGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
rJMFF027K17+ GCCGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
                      ____________________________________________________________
consensus GCCGGAGATTGGGATTTCTTTAACTCTACCTTCATGGACTCGGTTTTTGTCAGCCCCGCC
 
. : . : . : . : . : . :
JMFF029D16+ GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
rJMFF027K17+ GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
                      ____________________________________________________________
consensus GGTTTTGGCGTGAGTTTAGCGTCCAATTCTTCCACGGTATGAAACGAAGAGCTCTTTTTC
 
. : . : . : . : . : . :
JMFF029D16+ GGCTTAGGCGGCGAGTGCTTTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
JMFF048H24+ CTGGCGGCGGAGTAACGGCGTCTTT
rJMFF027K17+ GGCTTAGGCGGCGAGTGC-TTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
                      ____________________________________________________________
consensus GGCTTAGGCGGCGAGTGCTTTTTTTTCCGCCGCCGCTGGCGGCGGAGTAACGGCGTCTTT
 
. : . : . : . : . : . :
JMFF029D16+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
JMFF048H24+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
rJMFF027K17+ GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
                      ____________________________________________________________
consensus GGTGTTCTGAACCGCCGGCGGAAGCCCAGTGGAGTTTAACGTGGGCTTGAGGTCTTCCAA
 
. : . : . : . : . : . :
JMFF029D16+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
JMSF009J08+ CAATGGAGTTGAGCTTCTCAAG
JMFF048H24+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
rJMFF027K17+ GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
                      ____________________________________________________________
consensus GGCCTTGCTGACCTCATCCCAGGAGCGAGGAGCTTCTTCAATGGAGTTGAGCTTCTCAAG
 
. : . : . : . : . : . :
JMFF029D16+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
JMSF009J08+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
JMFF048H24+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
rJMFF027K17+ CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
                      ____________________________________________________________
consensus CAACGGCGGCGGGACGTGCGCCACCGCCTTTATCTTCTCCGCCTCCTTCTTTTTCTCATC
 
. : . : . : . : . : . :
JMFF029D16+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
JMSF009J08+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
JMFF048H24+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
rJMFF027K17+ ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
                      ____________________________________________________________
consensus ATCATCATCGTCTTGCATGTCGCCGGCAGCCTTGCCATTCATCAGCCACGGCTCCTCCAC
 
. : . : . : . : . : . :
JMFF029D16+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
JMSF009J08+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
JMFF048H24+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
rJMFF035K17+ GC
rJMFF027K17+ GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
                      ____________________________________________________________
consensus GTCGTTGACATCGAACACGGCGAAACTGGACGGCGGCGGACGGTACACGTCGACGGTGGC
 
. : . : . : . : . : . :
JMFF029D16+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
JMSF009J08+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
JMFF048H24+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
rJMFF035K17+ CTTGATTATCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCNTGGTTTTCCGACGAGGCT
rJMFF027K17+ CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
                      ____________________________________________________________
consensus CTTGATTCTCTTGGAAGAAGCGCACCCCATCTTGCCTTTTCTTGGTTTTCCGACGAGGCT
 
. : . : . : . : . : . :
JMFF029D16+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATAT
JMSF009J08+ TGTT
JMFF048H24+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATAT
rJMFF035K17+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
rJMFF027K17+ TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
                      ____________________________________________________________
consensus TGTTAGTTAGTGTTTGAGTTTGGAGGATAGAGTAGATATGTCGTTTTTGGTTAGAATAAT
 
. : . : . : . : . : . :
rJMFF035K17+ TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
rJMFF027K17+ TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
                      ____________________________________________________________
consensus TTGGTATTATTTGGGCGAAGAGAATTTGGCAAGATTGTAGTTGTATGGTTCTTGAAACGA
 
. : . : . : . : . : . :
rJMFF035K17+ CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGA
rJMFF027K17+ CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGATAAACCAT
                      ____________________________________________________________
consensus CGCGTGGCTCTTCATTTTTGGTCTGCATTCATTGATTGGTCATCGGAAAGGATAAACCAT