Contig 008240:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026L08Sequence601000143 (2)740008240 (2)
JMSF029C06Sequence662000143 (2)748008240 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF029C06+ TGGGTTGGGGATGCTAGGATGAATTTGTTGGAGTG
rJMFF026L08+ AGGATGAATTTGTTGGAGTG
                      ____________________________________________________________
consensus TGGGTTGGGGATGCTAGGATGAATTTGTTGGAGTG
 
. : . : . : . : . : . :
rJMSF029C06+ TCATTGGGAAAGATGGTCAATCCAGATCAGTTCATCATTAGTATATATGGAGGATGCTAC
rJMFF026L08+ TCATTGGGAAAGATGGTCAATCCAGATCAGTTCATCATTAGTATATATGGAGGATGCTAC
                      ____________________________________________________________
consensus TCATTGGGAAAGATGGTCAATCCAGATCAGTTCATCATTAGTATATATGGAGGATGCTAC
 
. : . : . : . : . : . :
rJMSF029C06+ CAGAGCAAGCTTAAATGTCTCCTTTACATCACTTCTAAATGGTTGTGGCAGATTACTGGA
rJMFF026L08+ CAGAGCAAGCTTAAATGTCTCCTTTACATCACTTCTAAATGGTTGTGGCAGATTACTGGA
                      ____________________________________________________________
consensus CAGAGCAAGCTTAAATGTCTCCTTTACATCACTTCTAAATGGTTGTGGCAGATTACTGGA
 
. : . : . : . : . : . :
rJMSF029C06+ AAGATCAATGATGATTTCACCTCACCGTGTGATGAAATGAAATGATGGCTAAGGGTATGG
rJMFF026L08+ AAGATCAATGATGATTTCACCTCACCGTGTGATGAAATGAAATGATGGCTAAGGGTATGG
                      ____________________________________________________________
consensus AAGATCAATGATGATTTCACCTCACCGTGTGATGAAATGAAATGATGGCTAAGGGTATGG
 
. : . : . : . : . : . :
rJMSF029C06+ ATCCTGATAAATTAATATATGGTTGTGAAACTATTGGAGAAGGGGCGTTAAGAGAACAAG
rJMFF026L08+ ATCCTGATAAATTAATATATGGTTGTGAAACTATTGGAGAAGGGGCGTTAAGAGAACAAG
                      ____________________________________________________________
consensus ATCCTGATAAATTAATATATGGTTGTGAAACTATTGGAGAAGGGGCGTTAAGAGAACAAG
 
. : . : . : . : . : . :
rJMSF029C06+ CGAATGAAACATTAGTAGAATCCTTGTGTTAAAATGGGGATATACTGAACTATTGATGTC
rJMFF026L08+ CGAATGAAACATTAGTAGAATCCTTGTGTTAAAATGGGGATATACTGAACTATTGATGTC
                      ____________________________________________________________
consensus CGAATGAAACATTAGTAGAATCCTTGTGTTAAAATGGGGATATACTGAACTATTGATGTC
 
. : . : . : . : . : . :
rJMSF029C06+ ACTTAATGAAATCGGAAAGCAGGGCTTCTCCCTAGTGTTAATATCTCTAGCACTTCAGTT
rJMFF026L08+ ACTTAATGAAATCGGAAAGCAGGGCTTCTCCCTAGTGTTAATATCTCTAGCACTTCAGTT
                      ____________________________________________________________
consensus ACTTAATGAAATCGGAAAGCAGGGCTTCTCCCTAGTGTTAATATCTCTAGCACTTCAGTT
 
. : . : . : . : . : . :
rJMSF029C06+ CATGGGTTGAACAGAGTGTATTACCAACCCTATGAAGCAAGCAGCACCAGAAGTAGCTCG
rJMFF026L08+ CATGGGTTGAACAGAGTGTATTACCAACCCTATGAAGCAAGCAGCACCAGAAGTAGCTCG
                      ____________________________________________________________
consensus CATGGGTTGAACAGAGTGTATTACCAACCCTATGAAGCAAGCAGCACCAGAAGTAGCTCG
 
. : . : . : . : . : . :
rJMSF029C06+ TCGGGTTCAATCCTCTTCACTAAAAGTAAAGAAGTATGGTACGGAAACTTATTTGACGGT
rJMFF026L08+ TCGGGTTCAATCCTCTTCACTAAAAGTAAAGAAGTATGGTACGGAAACTTATTTGACGGT
                      ____________________________________________________________
consensus TCGGGTTCAATCCTCTTCACTAAAAGTAAAGAAGTATGGTACGGAAACTTATTTGACGGT
 
. : . : . : . : . : . :
rJMSF029C06+ TGTACATGTGTATGTGTCTGATGATGATATTTGGTAATTAGGAGATGTGGCAGTGCAGTT
rJMFF026L08+ TGTACATGTGTATGTGTCTGATGATGATATTTGGTAATTAGGAGATGTGGCAGTGCAGTT
                      ____________________________________________________________
consensus TGTACATGTGTATGTGTCTGATGATGATATTTGGTAATTAGGAGATGTGGCAGTGCAGTT
 
. : . : . : . : . : . :
rJMSF029C06+ TGCTGTTGCAGAAGAATGTTGTTTGGTGTAGCAGATGGATGCCAGTTCTCCAAGGTGCAA
rJMFF026L08+ TGCTGTTGCAGAAGAATGTTGTTTGGTGTAGCAGATGGATGCCAGTTCTCCAAGGTGCAA
                      ____________________________________________________________
consensus TGCTGTTGCAGAAGAATGTTGTTTGGTGTAGCAGATGGATGCCAGTTCTCCAAGGTGCAA
 
. : . : . : . : . : . :
rJMSF029C06+ GGTGATCTGGTGTGATTGAATGGACTTCTTTCACTAGATTTATGCTAATCTCAGATTTTT
rJMFF026L08+ GGTGATCTGGTGTGATTGAATGGACTTCTTTCACTAGATTTATGCTAATCTCAGATTTTT
                      ____________________________________________________________
consensus GGTGATCTGGTGTGATTGAATGGACTTCTTTCACTAGATTTATGCTAATCTCAGATTTTT
 
. : . : . : . : . : . :
rJMSF029C06+ CTCTTTAGGGCTTGGTTCTTTGAGTATCTTTTTCCATTCTT
rJMFF026L08+ CTCTTTAGGGCTTGGTTCTTTGAGTATCTTTTTCCATTCTTTGGCCAGGTTGTGCCCAAC
                      ____________________________________________________________
consensus CTCTTTAGGGCTTGGTTCTTTGAGTATCTTTTTCCATTCTTTGGCCAGGTTGTGCCCAAC