Contig 008234:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025M22Sequence575008234 (4)ref|XP_009603375.1|1e-90PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis]684008234 (4)ref|XP_009758703.1|1e-101PREDICTED: nudix hydrolase 26, chloroplastic [Nicotiana sylvestris]
JMSF021J14Sequence586008234 (4)ref|XP_009603375.1|1e-78PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis]718008234 (4)ref|XP_009603375.1|3e-103PREDICTED: nudix hydrolase 26, chloroplastic-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF021J14- GGGGCAAGTATACTGTATACCT
                      ____________________________________________________________
consensus GGGGCAAGTATACTGTATACCT
 
. : . : . : . : . : . :
JMSF021J14- CGGCGCTTCTTGATAGCAAAACAGTAATTCTAGAGAAGTGCGCAAGGTATATCGAGTTGG
JMFF025M22- GCGCAAGGTATATCGAGTTGG
                      ____________________________________________________________
consensus CGGCGCTTCTTGATAGCAAAACAGTAATTCTAGAGAAGTGCGCAAGGTATATCGAGTTGG
 
. : . : . : . : . : . :
JMSF021J14- GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
JMFF025M22- GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
                      ____________________________________________________________
consensus GTTGTTTGATGGCTATATGCCGATCCATCCTCATAAACTCGCCAATTCCTCGTCGCCATT
 
. : . : . : . : . : . :
JMSF021J14- TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
JMFF025M22- TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
rJMSF021J14+ TCCAAATTTACAG
                      ____________________________________________________________
consensus TGCAGCCGATAATCGCCAATTCCACTTTCTCTCCCCCTCCGAGGTTCTCCAAATTTACAG
 
. : . : . : . : . : . :
JMSF021J14- CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
JMFF025M22- CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
rJMSF021J14+ CGNTGCCANTCCTCCGCCATAAACGCTCTCTACCTCCNTTCGCGTCACTCTCCATGGAAA
rJMFF025M22+ TTCGCGTCACTCTCCATGGAAA
                      ____________________________________________________________
consensus CGTTGCCACTCCTCCGCCATAAACGCTCTCTACCTCCCTTCGCGTCACTCTCCATGGAAA
 
. : . : . : . : . : . :
JMSF021J14- CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
JMFF025M22- CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
rJMSF021J14+ CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
rJMFF025M22+ CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
                      ____________________________________________________________
consensus CTCCTCCCGAGGGTTACCGTAGAAACGTAGGCATTTGCCTCATGAACCCTTCTGACAAAA
 
. : . : . : . : . : . :
JMSF021J14- AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
JMFF025M22- AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
rJMSF021J14+ AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
rJMFF025M22+ AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
                      ____________________________________________________________
consensus AGATTTTTGTTGCTTCGAGGCTTGATATACCTACTGCTTGGCAAATGCCTCAGGGTGGTG
 
. : . : . : . : . : . :
JMSF021J14- TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
JMFF025M22- TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
rJMSF021J14+ TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
rJMFF025M22+ TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
                      ____________________________________________________________
consensus TTGATGATAATGAAGATCCTAGAAATGCTGCCATCAGAGAACTAAGAGAAGAAACTGGAG
 
. : . : . : . : . : . :
JMSF021J14- TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
JMFF025M22- TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
rJMSF021J14+ TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
rJMFF025M22+ TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
                      ____________________________________________________________
consensus TTACTTCTGCAGAAATTATTGCTGAGGCGCCATACTGGTTGACATATGATTTCCCACCCG
 
. : . : . : . : . : . :
JMSF021J14- ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
JMFF025M22- ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
rJMSF021J14+ ATGTCAGGGAAAAANTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
rJMFF025M22+ ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
                      ____________________________________________________________
consensus ATGTCAGGGAAAAACTTAAGCGTCAATGGGGATCTGACTGGAAAGGTCAAGCGCAGAAAT
 
. : . : . : . : . : . :
JMSF021J14- GGTTCCTCTTTAAGTTTACCGGAA
JMFF025M22- GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
rJMSF021J14+ GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
rJMFF025M22+ GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
                      ____________________________________________________________
consensus GGTTCCTCTTTAAGTTTACCGGAAAGGATGAGGAAATCAACCTTCTGGGCGATGGGACCG
 
. : . : . : . : . : . :
JMFF025M22- AGAAGCCTGAATTC
rJMSF021J14+ AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
rJMFF025M22+ AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
                      ____________________________________________________________
consensus AGAAGCCTGAATTCGGAGAGTGGTCTTGGATGTCACCAGAACAAGTTGTCAATCATGCAG
 
. : . : . : . : . : . :
rJMSF021J14+ TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
rJMFF025M22+ TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
                      ____________________________________________________________
consensus TGGATTTCAAGAAGCCGGTTTACAAGGAAGTTGTGTCTGTTTTCACTCCATTTCTTCAAT
 
. : . : . : . : . : . :
rJMSF021J14+ AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
rJMFF025M22+ AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
                      ____________________________________________________________
consensus AGGCTTCGGCTATGTTAATTCTGCATTGTCTCAAGGGACCTTTGCCAGAGAGTAGAATGT
 
. : . : . : . : . : . :
rJMSF021J14+ GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
rJMFF025M22+ GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
                      ____________________________________________________________
consensus GTTATATGAACAGATGGACTGAAGAGTGAACACTCCTATAGGACTATAGGACATCCAAAG
 
. : . : . : . : . : . :
rJMSF021J14+ ATAAGTGNTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTG
rJMFF025M22+ ATAAGTGTTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTGTATTTAATCAAGACT
                      ____________________________________________________________
consensus ATAAGTGTTGAGGAACAACCCATTTCAAGACTATATTGGGGGGTGTATTTAATCAAGACT