Contig 008231:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N02Sequence584007439 (5)ref|XP_006363689.1|1e-29PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]721008231 (7)ref|XP_006363689.1|4e-94PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]
JMFF025E23Sequence584007439 (5)ref|XP_006363689.1|3e-30PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]804008231 (7)ref|XP_006363689.1|5e-107PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]
JMFF038D03Sequence543007439 (5)ref|XP_004249606.1|3e-25PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum lycopersicum]744008231 (7)gb|KHG20895.1|4e-86UDP-glucuronic acid decarboxylase 1 [Gossypium arboreum]
JMFN044E20Sequence528008231 (7)ref|XP_006348327.1|1e-52PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]
JMFS073D01Sequence623008231 (7)ref|XP_002534053.1|2e-141dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gb|EEF28331.1| dtdp-gl
JMSF040F14Sequence605007439 (5)ref|XP_006363689.1|2e-40PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]871008231 (7)ref|XP_002534053.1|2e-122dtdp-glucose 4-6-dehydratase, putative [Ricinus communis] gb|EEF28331.1| dtdp-gl
JMSF042C18Sequence807007439 (5)emb|CBI32663.3|3e-89unnamed protein product [Vitis vinifera]819008231 (7)ref|XP_006363689.1|2e-123PREDICTED: UDP-glucuronic acid decarboxylase 1-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS073D01- GGGCACTCTTAACATGCTGGGACTTGCAAAGAGGATTGGTGCAAGGTTCTTGCT
                      ____________________________________________________________
consensus GGGCACTCTTAACATGCTGGGACTTGCAAAGAGGATTGGTGCAAGGTTCTTGCT
 
. : . : . : . : . : . :
JMFS073D01- TACTAGTACGAGTGAGGTTTATGGAGATCCACTTGAGCATCCCCAGAAGGAAACTTATT-
rJMSF040F14+ TTTATGGAGATCCACNTGAGCATCCCCAGAAGGAAACTTATTG
                      ____________________________________________________________
consensus TACTAGTACGAGTGAGGTTTATGGAGATCCACTTGAGCATCCCCAGAAGGAAACTTATTG
 
. : . : . : . : . : . :
JMFS073D01- GGGGAAATGTTAATCCAATAGGTGAGCGGAGTTGCTATGATGAGGGAAAACGTACTG-CC
rJMSF040F14+ GGGGAAATGTTAATCCAATAGGTGAGCGGAGTTGCTATGATGAGGGAAAACGTACTG-CC
rJMFF038D03+ TGATGAGGGAAAACGTACTG-CC
rJMSF042C18+ GGGGAAATGTTAATCCAATAGGTGAGCGGAGTTGCTATGATGAGGGAAAACGTACTG-CC
rJMFF025E23+ CTATGATGAGGGAAAACGTACTGCCC
                      ____________________________________________________________
consensus GGGGAAATGTTAATCCAATAGGTGAGCGGAGTTGCTATGATGAGGGAAAACGTACTG-CC
 
. : . : . : . : . : . :
JMFS073D01- GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
rJMSF040F14+ GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
rJMFF038D03+ GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
rJMSF042C18+ GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
rJMFF008N02+ ACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTGCCCCGTAT
rJMFF025E23+ GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
                      ____________________________________________________________
consensus GAGACTTTGACTATGGATTATCACCGAGGTGCAGAAGTGGAGGTGCGCATTG-CCCGTAT
 
. : . : . : . : . : . :
JMFS073D01- TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
rJMSF040F14+ TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
rJMFF038D03+ TTTCAATACATATGGACCTCGAATGTCCACTAGATGATGGACGTGTTGTCAGTAACTTTG
rJMSF042C18+ TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
rJMFF008N02+ TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
rJMFF025E23+ TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
                      ____________________________________________________________
consensus TTTCAATACATATGGACCTCGAATGT-CACTAGATGATGGACGTGTTGTCAGTAACTTTG
 
. : . : . : . : . : . :
JMFS073D01- TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
rJMSF040F14+ TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
rJMFF038D03+ TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
rJMSF042C18+ TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
rJMFF008N02+ TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
rJMFF025E23+ TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
                      ____________________________________________________________
consensus TAGCTCAGGCTATTCGCAAGCAACCTATGACAGTGTATGGCGATGGACAGCAAACAAGAA
 
. : . : . : . : . : . :
JMFS073D01- GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
rJMSF040F14+ GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
rJMFF038D03+ GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
rJMSF042C18+ GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
rJMFF008N02+ GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
JMFN044E20- CGTTGATGGAAGGTGAGCATG
rJMFF025E23+ GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
                      ____________________________________________________________
consensus GCTTCCAATATGTTTCTGACTTGGTTGATGGACTGGTAGCGTTGATGGAAGGTGAGCATG
 
. : . : . : . : . : . :
JMFS073D01- TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
rJMSF040F14+ TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
rJMFF038D03+ TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
rJMSF042C18+ TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
rJMFF008N02+ TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
JMFN044E20- TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
rJMFF025E23+ TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
                      ____________________________________________________________
consensus TTGGGCCTTTCAACCTGGGAAATCCAGGGGAGTTCACCATGTTGGAGCTTGCTGAGGTTG
 
. : . : . : . : . : . :
JMFS073D01- TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
rJMSF040F14+ TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
rJMFF038D03+ TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
rJMSF042C18+ TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
rJMFF008N02+ TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAAACCAACACTGCTGACGACC
JMFN044E20- TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
rJMFF025E23+ TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
                      ____________________________________________________________
consensus TGAAAAAAGTGATTGATCCTAGTGCAACAATCGAATTTAAACCCAACACTGCTGACGACC
 
. : . : . : . : . : . :
JMFS073D01- CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
rJMSF040F14+ CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
rJMFF038D03+ CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
rJMSF042C18+ CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
rJMFF008N02+ CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
JMFN044E20- CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
rJMFF025E23+ CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
                      ____________________________________________________________
consensus CTCACAAGAGGAAGCCAGACATCAGTAGAGCAAAGGAACTTCTAAATTGGGAGCCGAGAA
 
. : . : . : . : . : . :
JMFS073D01- TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCA
rJMSF040F14+ TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
rJMFF038D03+ TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
rJMSF042C18+ TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
rJMFF008N02+ TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
JMFN044E20- TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
rJMFF025E23+ TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
                      ____________________________________________________________
consensus TCCCCCTGCAGGATGGGCTGCCCCTCATGGTCAATGATTTCCGCAATCGCATCTTGAATG
 
. : . : . : . : . : . :
rJMSF040F14+ AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
rJMFF038D03+ AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
rJMSF042C18+ AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
rJMFF008N02+ AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
JMFN044E20- AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
rJMFF025E23+ AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
                      ____________________________________________________________
consensus AAGATGAAGGAAAAGGGAACAAGTAAACAAACAGTATGTATAGATCATACTCTAGTGTCT
 
. : . : . : . : . : . :
rJMSF040F14+ TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
rJMFF038D03+ TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
rJMSF042C18+ TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
rJMFF008N02+ TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
JMFN044E20- TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
rJMFF025E23+ TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
                      ____________________________________________________________
consensus TATGTTGTTTATTTCTTTGTCTAGTTCATATATTCATTCTTTCTTCTTCACACGTGGGGC
 
. : . : . : . : . : . :
rJMSF040F14+ CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
rJMFF038D03+ CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
rJMSF042C18+ CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
rJMFF008N02+ CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
JMFN044E20- CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
rJMFF025E23+ CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
                      ____________________________________________________________
consensus CACCCCAACAGCTATAGTATCTAGCACTGTTCTACAGCAATAGGAATAAATTGTCTTATT
 
. : . : . : . : . : . :
rJMSF040F14+ TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
rJMFF038D03+ TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
rJMSF042C18+ TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
rJMFF008N02+ TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
JMFN044E20- TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
rJMFF025E23+ TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
                      ____________________________________________________________
consensus TTGATTTTGATTTTTTCTTCTTTTTTTGGGGTTAAATTCAAATTTTGTATCTTTACCCTT
 
. : . : . : . : . : . :
rJMSF040F14+ AATTCAAAATTGGGCATTGCC
rJMFF038D03+ AAT
rJMSF042C18+ AATTCAAAATTGGGCATTGCC
rJMFF008N02+ AATTCAAAATT
JMFN044E20- AATTCAAAATTGGGCATTGCC
rJMFF025E23+ AATTCAAAATTGGGCATTGCCTTGCTGTGTAAAACTCCTTTGTGATATTAGTAAGAAGCT
                      ____________________________________________________________
consensus AATTCAAAATTGGGCATTGCCTTGCTGTGTAAAACTCCTTTGTGATATTAGTAAGAAGCT