Contig 008230:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D24Sequence607005975 (2)ref|XP_006340690.1|5e-54PREDICTED: uncharacterized protein LOC102601992 isoform X1 [Solanum tuberosum] 769008230 (2)ref|XP_011090415.1|261PREDICTED: uncharacterized protein LOC105171097 [Sesamum indicum]
JMFF036F04Sequence581005975 (2)ref|XP_006340690.1|3e-54PREDICTED: uncharacterized protein LOC102601992 isoform X1 [Solanum tuberosum] 620008230 (2)emb|CDP01942.1|3e-51unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF025D24+                    TGAAGCTATGATACTTGACATGGACTTAGATCCCCCTGATCAAGACTCAT
                      ____________________________________________________________
consensus                       TGAAGCTATGATACTTGACATGGACTTAGATCCCCCTGATCAAGACTCAT
 
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rJMFF025D24+          ATACTGCAAAACAAGTAATAAGGTATCATCCTGAGGAAAGTAAAAGGACAGTCATAAGGT
                      ____________________________________________________________
consensus             ATACTGCAAAACAAGTAATAAGGTATCATCCTGAGGAAAGTAAAAGGACAGTCATAAGGT
 
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rJMFF036F04+                               GTATGCATAGAGCCATGACATCTCCATGGGGCTTTTGCC
rJMFF025D24+          TGGAACAATGTGCTCGTTCTTGTATGCATAGAGCCATGACATCT-CATGGGGCTTTTGCC
                      ____________________________________________________________
consensus             TGGAACAATGTGCTCGTTCTTGTATGCATAGAGCCATGACATCTCCATGGGGCTTTTGCC
 
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rJMFF036F04+          ATCTTATATGGCCGTCATCTAAAGTACTTCATCAAGAAAACAGAGGTTGTACTTGGGAGA
rJMFF025D24+          ATCTTATATGGCCGTCATCTAAAGTACTTCATCAAGAAAACAGAGGTTGTACTTGGGAGA
                      ____________________________________________________________
consensus             ATCTTATATGGCCGTCATCTAAAGTACTTCATCAAGAAAACAGAGGTTGTACTTGGGAGA
 
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rJMFF036F04+          TCAACAGATGACATTGATGTTGATATTGATTTGCGAAAAGAAGGCAATGCGAACAAAGTG
rJMFF025D24+          TCAACAGATGACATTGATGTTGATATTGATTTGCGAAAAGAAGGCAATGCGAACAAAGTG
                      ____________________________________________________________
consensus             TCAACAGATGACATTGATGTTGATATTGATTTGCGAAAAGAAGGCAATGCGAACAAAGTG
 
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rJMFF036F04+          TCTAGACGTCAAGCAATTATTAGGATGGAACGAGATGGATCTTTCTTTTTGAGGAATATT
rJMFF025D24+          TCTAGACGTCAAGCAATTATTAGGATGGAACGAGATGGATCTTTCTTTTTGAGGAATATT
                      ____________________________________________________________
consensus             TCTAGACGTCAAGCAATTATTAGGATGGAACGAGATGGATCTTTCTTTTTGAGGAATATT
 
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rJMFF036F04+          GGAAAGAGTTCGATAACAGTGAATGGCAAGTCAGTTGATTCTGGAAAAATGCAGTTTCTA
rJMFF025D24+          GGAAAGAGTTCGATAACAGTGAATGGCAAGTCAGTTGATTCTGGAAAAATGCAGTTTCTA
                      ____________________________________________________________
consensus             GGAAAGAGTTCGATAACAGTGAATGGCAAGTCAGTTGATTCTGGAAAAATGCAGTTTCTA
 
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rJMFF036F04+          AGTTCTAGTTGTCTGATTGAGATCAAAGGAATGGGCTTTGTGTTTGAAATCAACAGAAAG
rJMFF025D24+          AGTTCTAGTTGTCTGATTGAGATCAAAGGAATGGGCTTTGTGTTTGAAATCAACAGAAAG
                      ____________________________________________________________
consensus             AGTTCTAGTTGTCTGATTGAGATCAAAGGAATGGGCTTTGTGTTTGAAATCAACAGAAAG
 
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rJMFF036F04+          CATGTCCAGCGGTACTTGGACAGCATTTCACAGAAAGACAAAGCACAGCTTAGCAAATTT
rJMFF025D24+          CATGTCCAGCGGTACTTGGACAGCATTTCACAGAAAGACAAAGCACAGCTTAGCAAATTT
                      ____________________________________________________________
consensus             CATGTCCAGCGGTACTTGGACAGCATTTCACAGAAAGACAAAGCACAGCTTAGCAAATTT
 
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rJMFF036F04+          GATTGGTCACCTGAGGGGGAGGCCTGAACAGATAAAAACCATTTAGAGGTAGCGTCAGTT
rJMFF025D24+          GATTGGTCACCTGAGGGGGAGGCCTGAACAGATAAAAACCATTTAGAGGTAGCGTCAGTT
                      ____________________________________________________________
consensus             GATTGGTCACCTGAGGGGGAGGCCTGAACAGATAAAAACCATTTAGAGGTAGCGTCAGTT
 
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rJMFF036F04+          ATTTTATTGCTTTCAATTAACCCTCCCCGGTGGATGACTTTTATATCCTTCACTGAGAGT
rJMFF025D24+          ATTTTATTGCTTTCAATTAACCCTCCCCGGTGGATGACTTTTATATCCTTCACTGAGAGT
                      ____________________________________________________________
consensus             ATTTTATTGCTTTCAATTAACCCTCCCCGGTGGATGACTTTTATATCCTTCACTGAGAGT
 
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rJMFF036F04+          AAACGCCCTTCGCCCACAACAGGATGTGTACATACCGACCTTTAGCATGAATGTTTAATT
rJMFF025D24+          AAACGCCCTTCGCCCACAACAGGATGTGTACATACCGACCTTTAGCATGAATGTTTAATT
                      ____________________________________________________________
consensus             AAACGCCCTTCGCCCACAACAGGATGTGTACATACCGACCTTTAGCATGAATGTTTAATT
 
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rJMFF036F04+          AGCAAATAGATCCACCCTTTGCCATAGACCTGAAACGCCAT                   
rJMFF025D24+          AGCAAATAGATCCACCCTTTGCCATAGACCTGAAACGCCATGTGAGAGGTTTCAAGTACA
                      ____________________________________________________________
consensus             AGCAAATAGATCCACCCTTTGCCATAGACCTGAAACGCCATGTGAGAGGTTTCAAGTACA