| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003G09 | Sequence | 588 | 000471 (18) | ref|XP_004171648.1| | 4e-58 | PREDICTED: serine/threonine-protein phosphatase BSL1-like, partial [Cucumis sat | 787 | 008222 (2) | gb|KJB22565.1| | 0.0 | hypothetical protein B456_004G054500 [Gossypium raimondii] |
| JMFF022F07 | Sequence | 407 | 000471 (18) | ref|XP_003591564.1| | 1e-23 | Serine/threonine protein phosphatase, partial [Medicago truncatula] | 719 | 008222 (2) | gb|AFN44702.1| | 3e-169 | Ser/Thr phosphatase-containing Kelch repeat domain protein, partial [Nicotiana |
This contig is upended
. : . : . : . : . : . :
rJMFF003G09+ GATGATA
____________________________________________________________
consensus GATGATA
. : . : . : . : . : . :
rJMFF003G09+ ATTCCCAAGCTGCAGAAACCACTTCAGATGGTAGTGATTGTGAAGTAGATGTCCGCCTTC
____________________________________________________________
consensus ATTCCCAAGCTGCAGAAACCACTTCAGATGGTAGTGATTGTGAAGTAGATGTCCGCCTTC
. : . : . : . : . : . :
rJMFF003G09+ ACCCCAGAGCTGTTGTAGTTGCAAAAGAAGCTGTTGGTAACCTAGGAGGAATGGTAAGGC
rJMFF022F07+ CCCCAGAGCTGTNGTAGTTGCAAAAGAAGCTGTTGGTAACNTAGGAGGAATGGTAAGGC
____________________________________________________________
consensus ACCCCAGAGCTGTTGTAGTTGCAAAAGAAGCTGTTGGTAACCTAGGAGGAATGGTAAGGC
. : . : . : . : . : . :
rJMFF003G09+ AATTGTCATTGGATCAATTTGAAAATGAGAGCCGGCGAATGGTTCCATCTCAAAACGATC
rJMFF022F07+ AATTGTCATTGGATCAATTTGAAAATGAGAGCCGGCGAATGGTTCCATCTCAAAACGATC
____________________________________________________________
consensus AATTGTCATTGGATCAATTTGAAAATGAGAGCCGGCGAATGGTTCCATCTCAAAACGATC
. : . : . : . : . : . :
rJMFF003G09+ TGTCAAATCCAACGAAAAAATTTACTAGGCAGAAATCTCCCCAGGGGTTGCATAAGAAGA
rJMFF022F07+ TGTCAAATCCAACGAAAAAATTTACTAGGCAGAAATCTCCCCAGGGGTTGCATAAGAAGA
____________________________________________________________
consensus TGTCAAATCCAACGAAAAAATTTACTAGGCAGAAATCTCCCCAGGGGTTGCATAAGAAGA
. : . : . : . : . : . :
rJMFF003G09+ TCATATCTACTCTGCTTAGGCCTCGGAATTGGAAAGCTCCTGTCAACAGAAAGTTCTTTC
rJMFF022F07+ TCATATCTACTCTGCTTAGGCCTCGGAATTGGAAAGCTCCTGTCAACAGAAAGTTCTTTC
____________________________________________________________
consensus TCATATCTACTCTGCTTAGGCCTCGGAATTGGAAAGCTCCTGTCAACAGAAAGTTCTTTC
. : . : . : . : . : . :
rJMFF003G09+ TGGATTCTTATGAAGTGGGTGAACTCTGTTATGCTGCTGAGCAGATCTTCATGCATGAGC
rJMFF022F07+ TGGATTCTTATGAAGTGGGTGAACTCTGTTATGCTGCTGAGCAGATCTTCATGCATGAGC
____________________________________________________________
consensus TGGATTCTTATGAAGTGGGTGAACTCTGTTATGCTGCTGAGCAGATCTTCATGCATGAGC
. : . : . : . : . : . :
rJMFF003G09+ CCACTGTTCTACAACTGAAAGCTCCAGTCAAAGTGTTTGGTGATCTCCATGGACAGTTTG
rJMFF022F07+ CCACTGTTCTACAACTGAAAGCTCCAGTCAAAGTGTTTGGTGATCTCCATGGACAGTTTG
____________________________________________________________
consensus CCACTGTTCTACAACTGAAAGCTCCAGTCAAAGTGTTTGGTGATCTCCATGGACAGTTTG
. : . : . : . : . : . :
rJMFF003G09+ GTGATCTAATGCGACTGTTTGATGAATATGGATTTCCTTCCACTGCCGGAGACGTAACTT
rJMFF022F07+ GTGATCTAATGCGACTGTTTGATGAATATGGATTTCCTTCCACTGCCGGAGACGTAACTT
____________________________________________________________
consensus GTGATCTAATGCGACTGTTTGATGAATATGGATTTCCTTCCACTGCCGGAGACGTAACTT
. : . : . : . : . : . :
rJMFF003G09+ ATATTGACTATTTATTTCTCGGCGATTACGTTGATCGAGGACAGCACAGCTTGGAGACCA
rJMFF022F07+ ATATTGACTATTTATTTCTCGGCGATTACGTTGATCGAGGACAGCACAGCTTGGAGACCA
____________________________________________________________
consensus ATATTGACTATTTATTTCTCGGCGATTACGTTGATCGAGGACAGCACAGCTTGGAGACCA
. : . : . : . : . : . :
rJMFF003G09+ TCACTTTGCTTCTAGCTCTAAAAATTGAATATCCTGAGAATGTTCATTTAATACGAGGCA
rJMFF022F07+ TCACTTTGCTTCTAGCTCTAAAAATTGAATATCCTGAGAATGTTCATTTAATACGAGGCA
____________________________________________________________
consensus TCACTTTGCTTCTAGCTCTAAAAATTGAATATCCTGAGAATGTTCATTTAATACGAGGCA
. : . : . : . : . : . :
rJMFF003G09+ ATCATGAGGCTGCAGACATCAATGCACTTTTTGGTTTTCGAATTGAATGCATTGAAAGAA
rJMFF022F07+ ATCATGAGGCTGCAGACATCAATGCACTTTTTGGTTTTCGAATTGAATGCATTGAAAGAA
____________________________________________________________
consensus ATCATGAGGCTGCAGACATCAATGCACTTTTTGGTTTTCGAATTGAATGCATTGAAAGAA
. : . : . : . : . : . :
rJMFF003G09+ TGGGGGAGAATGATGGAATCTGGGCTTGGACGCGTTTCAATCAACTGTTTAACTATCTTC
rJMFF022F07+ TGGGGGAGAATGATGGAATCTGGGCTTGGACGCGTTTCAATCAACTGTTTAACTATCTTC
____________________________________________________________
consensus TGGGGGAGAATGATGGAATCTGGGCTTGGACGCGTTTCAATCAACTGTTTAACTATCTTC
. : . : . : . : . : . :
rJMFF003G09+ CACTTGCTGCACTTATTGAAAAGAAAATCATCTGTATGCATGGTGGTATAGGGAGGTCAA
rJMFF022F07+ CACTTGCTGCACTTATTGAAAAGAAAATCATCTGTATGCATGGTGGTATAGGGAGGTCAA
____________________________________________________________
consensus CACTTGCTGCACTTATTGAAAAGAAAATCATCTGTATGCATGGTGGTATAGGGAGGTCAA