Contig 008218:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020M11Sequence505006661 (3)ref|XP_010032541.1|3e-54PREDICTED: serine carboxypeptidase-like 25 [Eucalyptus grandis] gb|KCW51926.1| h632008218 (3)ref|XP_009771074.1|2e-104PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]
JMSF041D15Sequence778006661 (3)ref|XP_009771074.1|5e-116PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]666008218 (3)ref|XP_009771074.1|2e-127PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]
JMSF041G15Sequence800006661 (3)ref|XP_009771074.1|2e-120PREDICTED: serine carboxypeptidase-like 25 [Nicotiana sylvestris]638008218 (3)ref|XP_009596929.1|6e-120PREDICTED: serine carboxypeptidase-like 25 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF041G15+                                                        GACCAGTACAACAT
rJMSF041D15+                             GCCATGGACCAGGAGTTCGGGAACATCGACCAGTACAACAT
                      ____________________________________________________________
consensus                                GCCATGGACCAGGAGTTCGGGAACATCGACCAGTACAACAT
 
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rJMSF041G15+          CTACGCGCCGCCGTGTAACAACTCCGACGGCTCCACCCGCCACCACATGCGCCTTCCCCA
rJMSF041D15+          CTACGCGCCGCCGTGTAACAACTCCGACGGCTCCACCCGCCACCACATGCGCCTTCCCCA
rJMFF020M11+                                      GGCTCCACCCGCCACCACATGCGCCTTCCCCA
                      ____________________________________________________________
consensus             CTACGCGCCGCCGTGTAACAACTCCGACGGCTCCACCCGCCACCACATGCGCCTTCCCCA
 
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rJMSF041G15+          -CCAACCCCGCCGCGCATTCCGCCCCTTGTCCGGCTACGATCCCTGCACTGAAAAATACG
rJMSF041D15+          -CCAACCCCGCCGCGCATTCCGCCCCTTGTCCGGCTACGATCCCTGCACTGAAAAATACG
rJMFF020M11+          CCCAACCCCGCCGCGCATTCCGCCCCTTGTCCGGCTACGATCCCTGCACTGAAAAATACG
                      ____________________________________________________________
consensus             -CCAACCCCGCCGCGCATTCCGCCCCTTGTCCGGCTACGATCCCTGCACTGAAAAATACG
 
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rJMSF041G15+          CTGAAATTTACTACAACCGACCCGATGTCCAGAAAGCCATGCACGCTAACACCACAAGAA
rJMSF041D15+          CTGAAATTTACTACAACCGACCCGATGTCCAGAAAGCCATGCACGCTAACACCACAAGAA
rJMFF020M11+          CTGAAATTTACTACAACCGACCCGATGTCCAGAAAGCCATGCACGCTAACACCACAAGAA
                      ____________________________________________________________
consensus             CTGAAATTTACTACAACCGACCCGATGTCCAGAAAGCCATGCACGCTAACACCACAAGAA
 
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rJMSF041G15+          TCCCATACAAATGGACAGCCTGCAGTGAAACATTAAACCGGAATTGGAATGACACCGACG
rJMSF041D15+          TCCCATACAAATGGACAGCCTGCAGTGAAACATTAAACCGGAATTGGAATGACACCGACG
rJMFF020M11+          TCCCATACAAATGGACAGCCTGCAGTGAAACATTAAACCGGAATTGGAATGACACCGACG
                      ____________________________________________________________
consensus             TCCCATACAAATGGACAGCCTGCAGTGAAACATTAAACCGGAATTGGAATGACACCGACG
 
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rJMSF041G15+          ATTCAATCCTCCCAATTTACCGGGAGCTAATCGCCGCCGGTCTGAGAATCTGGGTTTTCA
rJMSF041D15+          ATTCAATCCTCCCAATTTACCGGGAGCTAATCGCCGCCGGTCTGAGAATCTGGGTTTTCA
rJMFF020M11+          ATTCAATCCTCCCAATTTACCGGGAGCTAATCGCCGCCGGTCTGAGAATCTGGGTTTTCA
                      ____________________________________________________________
consensus             ATTCAATCCTCCCAATTTACCGGGAGCTAATCGCCGCCGGTCTGAGAATCTGGGTTTTCA
 
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rJMSF041G15+          GTGGCGATGTAGATTCGGTAGTGCCAGTGACAGCAACACGTTACTCTCTAGCGCAGCTTA
rJMSF041D15+          GTGGCGATGTAGATTCGGTAGTGCCAGTGACAGCAACACGTTACTCTCTAGCGCAGCTTA
rJMFF020M11+          GTGGCGATGTAGATTCGGTAGTGCCAGTGACAGCAACACGTTACTCTCTAGCGCAGCTTA
                      ____________________________________________________________
consensus             GTGGCGATGTAGATTCGGTAGTGCCAGTGACAGCAACACGTTACTCTCTAGCGCAGCTTA
 
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rJMSF041G15+          AGTTGTCTGTCACAACTCCGTGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGATGGT
rJMSF041D15+          AGTTGTCTGTCACAACTCCGTGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGATGGT
rJMFF020M11+          AGTTGTCTGTCACAACTCCGTGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGATGGT
                      ____________________________________________________________
consensus             AGTTGTCTGTCACAACTCCGTGGTATCCTTGGTATGTCAAAAATCAGGTTGGAGGATGGT
 
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rJMSF041G15+          CCGAGGTATACAAAGGGCTAACGTTCGCGACGGTACGAGGAGCTGGACATGAAGTGCCAT
rJMSF041D15+          CCGAGGTATACAAAGGGCTAACGTTCGCGACGGTACGAGGAGCTGGACATGAAGTGCCAT
rJMFF020M11+          CCGAGGTATACAAAGGGCTAACGTTCGCGACGGTACGAGGAGCTGGACATGAAGTGCCAT
                      ____________________________________________________________
consensus             CCGAGGTATACAAAGGGCTAACGTTCGCGACGGTACGAGGAGCTGGACATGAAGTGCCAT
 
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rJMSF041G15+          TGTTTAAGCCCAGAGCAGCATTGCAGCTTCTGAGATCATTCTTGAGAGGGGAACCTCTTC
rJMSF041D15+          TGTTTAAGCCCAGAGCAGCATTGCAGCTTCTGAGATCATTCTTGAGAGGGGAACCTCTTC
rJMFF020M11+          TGTTTAAGCCCAGAGCAGCATTGCAGCTTCTGAGATCATTCTTGAGAGGGGAACCTCTTC
                      ____________________________________________________________
consensus             TGTTTAAGCCCAGAGCAGCATTGCAGCTTCTGAGATCATTCTTGAGAGGGGAACCTCTTC
 
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rJMSF041G15+          CCAAATCATAGTATTATCAATTGTTGTATGTTTTGTGTACTTTGAGTTACGGAAAAGTCT
rJMSF041D15+          CCAAATCATAGTATTATCAATTGTTGTATGTTTTGTGTACTTTGAGTTACGGAAAAGTCT
rJMFF020M11+          CCAAATCATAGTATTATCAATTGTTGTATGTTTTGTGTACTTTGAGTTACGGAAAAGTCT
                      ____________________________________________________________
consensus             CCAAATCATAGTATTATCAATTGTTGTATGTTTTGTGTACTTTGAGTTACGGAAAAGTCT
 
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rJMSF041G15+          AAAGTCTTTCAACTGTTGT                                         
rJMSF041D15+          AAAGTCTTTCAACTGTTGT                                         
rJMFF020M11+          AAAGTCTTTCAACTGTTGTTAACGAACGTGATTCTTAATTGGATTGGGGAATAGGTAACA
                      ____________________________________________________________
consensus             AAAGTCTTTCAACTGTTGTTAACGAACGTGATTCTTAATTGGATTGGGGAATAGGTAACA