Contig 008203:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017K09Sequence590008203 (2)emb|CDP13630.1|3e-65unnamed protein product [Coffea canephora]780008203 (2)emb|CDP13630.1|9e-96unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMFF017K09-                                                   GCTTCTACTTTATCGATAAC
                      ____________________________________________________________
consensus                                                     GCTTCTACTTTATCGATAAC
 
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JMFF017K09-           ATTCGCGGAAGCTCAGCCTGCACGCAATCCAACAAAGATGGGATGCCATCATCTGATGAC
                      ____________________________________________________________
consensus             ATTCGCGGAAGCTCAGCCTGCACGCAATCCAACAAAGATGGGATGCCATCATCTGATGAC
 
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JMFF017K09-           CGATCAACGGTCAGATCCGAACGGGTTGAACATGCAGACAGACGTATATACATCCATATA
                      ____________________________________________________________
consensus             CGATCAACGGTCAGATCCGAACGGGTTGAACATGCAGACAGACGTATATACATCCATATA
 
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JMFF017K09-           TACGCGCGCTTTCGCGCATATATCCTCTCATTTATCATCTAAAAATTTGGAGCCCTAATT
                      ____________________________________________________________
consensus             TACGCGCGCTTTCGCGCATATATCCTCTCATTTATCATCTAAAAATTTGGAGCCCTAATT
 
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JMFF017K09-           TCTTCAGGAGAATTCAGACAGAACATATTTTGCAGGAGAATTCATGGCTTTCTTGGCAAC
rJMFF017K09+          TCTTCAGGAGAATTCAGACAGAACATATTTTGCAGGAGAATTCATGGCTTTCTTGGCAAC
                      ____________________________________________________________
consensus             TCTTCAGGAGAATTCAGACAGAACATATTTTGCAGGAGAATTCATGGCTTTCTTGGCAAC
 
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JMFF017K09-           TGCCGAAATTTGTGATTCAAACGCATCTCATCTTGCGAGTGGCGACTTGCGGGTCCTGCA
rJMFF017K09+          TGCCGAAATTTGTGATTCAAACGCATCTCATCTTGCGAGTGGCGACTTGCGGGTCCTGCA
                      ____________________________________________________________
consensus             TGCCGAAATTTGTGATTCAAACGCATCTCATCTTGCGAGTGGCGACTTGCGGGTCCTGCA
 
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JMFF017K09-           TCCGGTATTTCAGATCTATGGGCAATGCCGTTCATTTTCAGGCCCTATTGTTACTCTTAA
rJMFF017K09+          TCCGGTATTTCAGATCTATGGGCAATGCCGTTCATTTTCAGGCCCTATTGTTACTCTTAA
                      ____________________________________________________________
consensus             TCCGGTATTTCAGATCTATGGGCAATGCCGTTCATTTTCAGGCCCTATTGTTACTCTTAA
 
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JMFF017K09-           GGTGTTTGAGGACAATGTGTTGGTGAGAGAGCTTCTCGAGAGCCGGGGCGAAGGCAGAGT
rJMFF017K09+          GGTGTTTGAGGACAATGTGTTGGTGAGAGAGCTTCTCGAGAGCCGGGGCGAAGGCAGAGT
                      ____________________________________________________________
consensus             GGTGTTTGAGGACAATGTGTTGGTGAGAGAGCTTCTCGAGAGCCGGGGCGAAGGCAGAGT
 
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JMFF017K09-           CTTGGTAATAGATGGTGGTGGGAGCATGAGGTGTGCCTTGGTGGGAGGGAATTTGGCGCA
rJMFF017K09+          CTTGGTAATAGATGGTGGTGGGAGCATGAGGTGTGCCTTGGTGGGAGGGAATTTGGCGCA
                      ____________________________________________________________
consensus             CTTGGTAATAGATGGTGGTGGGAGCATGAGGTGTGCCTTGGTGGGAGGGAATTTGGCGCA
 
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JMFF017K09-           GCTAGCTCAGAATATGAATTGGGCTGGCATTATTGTAAATGGTTGCATTAGAGATGTCGA
rJMFF017K09+          GCTAGCTCAGAATATGAATTGGGCTGGCATTATTGTAAATGGTTGCATTAGAGATGTCGA
                      ____________________________________________________________
consensus             GCTAGCTCAGAATATGAATTGGGCTGGCATTATTGTAAATGGTTGCATTAGAGATGTCGA
 
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JMFF017K09-           TGAGATCAACGGCTGCGATGTTGGGGTCCG                              
rJMFF017K09+          TGAGATCAACGGCTGCGATGTTGGGGTCCGAGCATTGGCGACACACCCTCAGAAATCCGG
                      ____________________________________________________________
consensus             TGAGATCAACGGCTGCGATGTTGGGGTCCGAGCATTGGCGACACACCCTCAGAAATCCGG
 
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rJMFF017K09+          CAAGAAGGGCATTGGCGAGAAACATGTGCCTGTTTATGTAGGCGGAACTTTAATTCGCGA
                      ____________________________________________________________
consensus             CAAGAAGGGCATTGGCGAGAAACATGTGCCTGTTTATGTAGGCGGAACTTTAATTCGCGA
 
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rJMFF017K09+          TGGGGAATGGTTGTATGCTGATAGTGATGGTGTTCTCATTTCAAAAAGTGAGCTCTCTAT
                      ____________________________________________________________
consensus             TGGGGAATGGTTGTATGCTGATAGTGATGGTGTTCTCATTTCAAAAAGTGAGCTCTCTAT
 
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rJMFF017K09+          CTGAAGTTCTTAATACTCTGTTGGGTTCTTGCAATTGATCTACATTGAACTGTGGTGATG
                      ____________________________________________________________
consensus             CTGAAGTTCTTAATACTCTGTTGGGTTCTTGCAATTGATCTACATTGAACTGTGGTGATG
 
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rJMFF017K09+          CTTTGATCATTGCACACAACCTCATTCTCATTCACTCTTTTATGGTGTATCTATCTAGTT
                      ____________________________________________________________
consensus             CTTTGATCATTGCACACAACCTCATTCTCATTCACTCTTTTATGGTGTATCTATCTAGTT
 
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rJMFF017K09+          TATCCAACATTGTTGTCTGTTTAGGTATGTTTAATTTACATCCAAAAACTGATTTATTAT
                      ____________________________________________________________
consensus             TATCCAACATTGTTGTCTGTTTAGGTATGTTTAATTTACATCCAAAAACTGATTTATTAT
 
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rJMFF017K09+          ACCGGATAACGTACATAATTTTGCTTGATTATGGAACTTGAACTGCTGAAGTTAGAAATT
                      ____________________________________________________________
consensus             ACCGGATAACGTACATAATTTTGCTTGATTATGGAACTTGAACTGCTGAAGTTAGAAATT