Contig 008202:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017G21Sequence555008202 (2)ref|XP_009780405.1|2e-39PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]628008202 (2)ref|XP_009780405.1|8e-35PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF017G21- AAAAAAAAAAATTAAAATGAAGAAGTAG
                      ____________________________________________________________
consensus AAAAAAAAAAATTAAAATGAAGAAGTAG
 
. : . : . : . : . : . :
JMFF017G21+ CGGCCAAAAATGTGG
rJMFF017G21- AGCTGTANAATTTACACGAGCGAGCACAAATGAAAATCCCAAACGCGGCCAAAAATGTGG
                      ____________________________________________________________
consensus AGCTGTANAATTTACACGAGCGAGCACAAATGAAAATCCCAAACGCGGCCAAAAATGTGG
 
. : . : . : . : . : . :
JMFF017G21+ GACCCCCCACGAAAACCGGAAACTACCAACACTGATCGCTCTCCCATCTCCGGGTCATAC
rJMFF017G21- GACCCCCCACGAAAACCGGAAACTACCAACACTGATCGCTCTCCCATCTCCGGGTCATAC
                      ____________________________________________________________
consensus GACCCCCCACGAAAACCGGAAACTACCAACACTGATCGCTCTCCCATCTCCGGGTCATAC
 
. : . : . : . : . : . :
JMFF017G21+ AAGACCCGGCGCTATAACCGCTCAACCCGTTCCGCCCCCGGCTGCCCACTCTCAACTTCA
rJMFF017G21- AANACCCGGNGCTATAACCGCTCAACCCGTTCCGCCCCCGGNTGCCCACTCTCAACTTCA
                      ____________________________________________________________
consensus AAGACCCGGCGCTATAACCGCTCAACCCGTTCCGCCCCCGGCTGCCCACTCTCAACTTCA
 
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JMFF017G21+ GGTCGTATAACGCACGCGACTCCGGATCGGAGAGCGTGGCGTATGCGTTTTGTATCTCCA
rJMFF017G21- GGTCGTATAACGCACGCGACTCCGGATCGGANAGCGNGGCGTATGCGTTTTGTATCTCCA
                      ____________________________________________________________
consensus GGTCGTATAACGCACGCGACTCCGGATCGGAGAGCGTGGCGTATGCGTTTTGTATCTCCA
 
. : . : . : . : . : . :
JMFF017G21+ TGAAAAGGTGTCCGTCCGACGACGACTCCTCTTCGAAGCGAGCGGCGGCATCGGGGTGAT
rJMFF017G21- TGAAAAGGNGTCCGTCCGACNACNACTCCTCTTCNAAGCGAGCGGCGGCATCGGGGNGAT
                      ____________________________________________________________
consensus TGAAAAGGTGTCCGTCCGACGACGACTCCTCTTCGAAGCGAGCGGCGGCATCGGGGTGAT
 
. : . : . : . : . : . :
JMFF017G21+ AAATCTTCGCTAACGTTCGATAGGCCGCTTTGATCTCCCTCGGCGACGCGTTCTGCTTCA
rJMFF017G21- AAATCTTCNCTAACGTTCGATAGGCCGCTTTGATCTCCCTCGGCGACGCGTTCTGCTTCA
                      ____________________________________________________________
consensus AAATCTTCGCTAACGTTCGATAGGCCGCTTTGATCTCCCTCGGCGACGCGTTCTGCTTCA
 
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JMFF017G21+ CTCTTAGAACCTCGTAGAGGCTCCCCGGCCCTCTCATCTCCACCGCCGGTGCCGCCTCGG
rJMFF017G21- CTCTTAAAACCTCGNAAAGGCTCCCCGGCCCTCTCATCTCCACCGCCGGNGCCGCCTCGG
                      ____________________________________________________________
consensus CTCTTAGAACCTCGTAGAGGCTCCCCGGCCCTCTCATCTCCACCGCCGGTGCCGCCTCGG
 
. : . : . : . : . : . :
JMFF017G21+ CCATGGCCGAGGAAATCACCGGTCTCCGTAGCTTCGCTCCCTCGAGTTGCATTTTCCGGC
rJMFF017G21- CCATGGCCGAGGAAATCACCGGTCTCCGNAGCTTCNCTCCCTCGAGTTGCATTTTCCGGC
                      ____________________________________________________________
consensus CCATGGCCGAGGAAATCACCGGTCTCCGTAGCTTCGCTCCCTCGAGTTGCATTTTCCGGC
 
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JMFF017G21+ TTGATCTAACGGCTCCGGAGGAAACAGAAGCAGAAAGGTTTAGCGTGTGGAGCATTTGAA
rJMFF017G21- TTGATCTAACGGCTCCGGAGGAAACAGAAGCAAAAAGGTTTAGCGNGTGGAGCATTTGAA
                      ____________________________________________________________
consensus TTGATCTAACGGCTCCGGAGGAAACAGAAGCAGAAAGGTTTAGCGTGTGGAGCATTTGAA
 
. : . : . : . : . : . :
JMFF017G21+ AATTGAAGGAGGAGGAGAAGAAGAAGAGAATATGAATGATTAGAGGAATGATTGAGAATT
rJMFF017G21- AATTGAAGGAGGAGGAGAAGAANAANAGAATATGAATGATTANAGGAATGATTGAAAATT
                      ____________________________________________________________
consensus AATTGAAGGAGGAGGAGAAGAAGAAGAGAATATGAATGATTAGAGGAATGATTGAGAATT