Contig 008192:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP015G01Sequence453008192 (7)ref|XP_006429231.1|8e-33hypothetical protein CICLE_v10013135mg [Citrus clementina] ref|XP_006480910.1| P
JMFF015I17Sequence579008192 (7)ref|XP_007026867.1|5e-40Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami546008192 (7)ref|XP_007026867.1|4e-40Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami
JMSF002J20Sequence348008192 (7)gb|KJB46518.1|1e-29hypothetical protein B456_007G377400 [Gossypium raimondii]540008192 (7)ref|XP_007026867.1|4e-40Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami
JMSF016L14Sequence227008192 (7)ref|XP_007026868.1|5e-08Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami541008192 (7)ref|XP_007026867.1|4e-40Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfami

Alignment

This contig is upended


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rJMCP015G01+                       ATGGGTGGAAATCATCTTAATTATTATTGCACATACATACATAGTTT
rJMSF002J20-                                                                   TTT
JMFF015I17+                            GTGGAAATCATCTTAATTATTATTGCACATACATACATAGTTT
rJMSF016L14-                                                                  GTTT
rJMFF015I17-                                                                  GTTT
                      ____________________________________________________________
consensus                          ATGGGTGGAAATCATCTTAATTATTATTGCACATACATACATAGTTT
 
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rJMCP015G01+          GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
rJMSF002J20-          GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
JMFF015I17+           GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
rJMSF016L14-          GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
rJMFF015I17-          GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
                      ____________________________________________________________
consensus             GCCCAAGAAGGGCATGCATAACATAATTTACGTTCATAATCAACCCAAGAAACTTGTTTT
 
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rJMCP015G01+          CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
rJMSF002J20-          CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
JMFF015I17+           CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
rJMSF016L14-          CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
rJMFF015I17-          CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
                      ____________________________________________________________
consensus             CAGTTCATGCATGCATATCACCAATCCAGCAACTAATTAATAAAACCCATTTTTGCAGGT
 
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rJMCP015G01+          GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
rJMSF002J20-          GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
JMFF015I17+           GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
rJMSF016L14-          GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
rJMFF015I17-          GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
                      ____________________________________________________________
consensus             GATTTATTCAACCCGAGGCTGCACTCATGGCAGGGTATATGGTCCGCATTTGTAGCCGAT
 
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rJMCP015G01+          GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
JMSF002J20+                    GGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
rJMSF002J20-          GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
JMFF015I17+           GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
rJMSF016L14-          GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
rJMFF015I17-          GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
                      ____________________________________________________________
consensus             GGGGCGGTTGGCGAGGTTGCAGCGCTTGGGGATGGTAATGCCGGCTTCGGGCTTCACGCC
 
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rJMCP015G01+          GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
JMSF002J20+           GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
rJMSF002J20-          GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
JMFF015I17+           GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
rJMSF016L14-          GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
rJMFF015I17-          GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
                      ____________________________________________________________
consensus             GGAGCTCTTGGCCATGTCGGAGAAGAGGACGGCGCAGAGGCAGCCCGGGTTCTGGCTGAA
 
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rJMCP015G01+          CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
JMSF002J20+           CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
rJMSF002J20-          CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
JMFF015I17+           CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
rJMSF016L14-          CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
JMSF016L14+                     TGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCNTGCGCCGCCGC
rJMFF015I17-          CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
                      ____________________________________________________________
consensus             CTTCTTCACCTGAAAGCAGCAGCTGCTGGAAACCGCCGCCTTCGCGTCCTGCGCCGCCGC
 
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rJMCP015G01+          CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCC              
JMSF002J20+           CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
rJMSF002J20-          CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
JMFF015I17+           CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
rJMSF016L14-          CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
JMSF016L14+           CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
rJMFF015I17-          CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
                      ____________________________________________________________
consensus             CGCACACGGCAGCAGCTTTATGGCCTCGTCGTCTGGAGATGAGTCCCCGCATGGCCCCGC
 
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JMSF002J20+           CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
rJMSF002J20-          CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
JMFF015I17+           CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
rJMSF016L14-          CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
JMSF016L14+           CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
rJMFF015I17-          CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
                      ____________________________________________________________
consensus             CGCTTCCACGCTCACTGCTCCTAGAACACACACCATAACAAGAAAACCAACAAAAACCTT
 
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JMSF002J20+           CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCAC     
rJMSF002J20-          CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCAC     
JMFF015I17+           CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCACT    
rJMSF016L14-          CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCACT    
JMSF016L14+           CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCACT    
rJMFF015I17-          CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCACTCGGT
                      ____________________________________________________________
consensus             CAATGGTGCCTCCATTTTTAATCTTTAGATATATATATCACACTCTACACCGCACTCGGT