Contig 008181:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012F11Sequence553008181 (2)gb|KCW69877.1|4e-06hypothetical protein EUGRSUZ_F03213 [Eucalyptus grandis]719008181 (2)ref|XP_010257766.1|74.3PREDICTED: uncharacterized protein LOC104597731 [Nelumbo nucifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012F11- ATCTTAAGC
                      ____________________________________________________________
consensus ATCTTAAGC
 
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JMFF012F11- TCTATCATTCAAGAATTATATTACAAAGAAGCATTCTAAGTTTCTTTCTTTCATTCTTGT
rJMFF012F11+ CTATCATTCAAGAATTATATTACAAAGAAGCATTCTAAGTTTCTTTCTTTCATTCTTGT
                      ____________________________________________________________
consensus TCTATCATTCAAGAATTATATTACAAAGAAGCATTCTAAGTTTCTTTCTTTCATTCTTGT
 
. : . : . : . : . : . :
JMFF012F11- TTTATACTTTCTGCAATTCTTGGATTTCTTGCATCAGTAATGGCTGAAACCCTTGGATAT
rJMFF012F11+ TTTATACTTTCTGCAATTCTTGGATTTCTTGCATCAGTAATGGCTGAAACCCTTGGATAT
                      ____________________________________________________________
consensus TTTATACTTTCTGCAATTCTTGGATTTCTTGCATCAGTAATGGCTGAAACCCTTGGATAT
 
. : . : . : . : . : . :
JMFF012F11- GATTTGAGTGCGTTTGAAATCAACAGCGAGGTACTGACGTCATTCCTTGAAGAATCACTC
rJMFF012F11+ GATTTGAGTGCGTTTGAAATCAACAGCGAGGTACTGACGTCATTCCTTGAAGAATCACTC
                      ____________________________________________________________
consensus GATTTGAGTGCGTTTGAAATCAACAGCGAGGTACTGACGTCATTCCTTGAAGAATCACTC
 
. : . : . : . : . : . :
JMFF012F11- ATGGAGGATGCGGATGATGAAAGGTTGACGAGTGTGATGCGGTCTTTGGAAGCTGAGATT
rJMFF012F11+ ATGGAGGATGCGGATGATGAAAGGTTGACGAGTGTGATGCGGTCTTTGGAAGCTGAGATT
                      ____________________________________________________________
consensus ATGGAGGATGCGGATGATGAAAGGTTGACGAGTGTGATGCGGTCTTTGGAAGCTGAGATT
 
. : . : . : . : . : . :
JMFF012F11- TCCGCCGCCGCTGCAGGCGGAGATGATTTCACTTCCCTGCCGGAGATTAAATCGGAGGAC
rJMFF012F11+ TCCGCCGCCGCTGCAGGCGGAGATGATTTCACTTCCCTGCCGGAGATTAAATCGGAGGAC
                      ____________________________________________________________
consensus TCCGCCGCCGCTGCAGGCGGAGATGATTTCACTTCCCTGCCGGAGATTAAATCGGAGGAC
 
. : . : . : . : . : . :
JMFF012F11- CTTCATGGATCCATGGAGGAGGAATTTCAGCCGTATGATCTGAGTGCATCCGAGGGCTAT
rJMFF012F11+ CTTCATGGATCCATGGAGGAGGAATTTCAGCCGTATGATCTGAGTGCATCCGAGGGCTAT
                      ____________________________________________________________
consensus CTTCATGGATCCATGGAGGAGGAATTTCAGCCGTATGATCTGAGTGCATCCGAGGGCTAT
 
. : . : . : . : . : . :
JMFF012F11- TGCACATCCTCGGACCTCGAGTTTGATTGGACCACTGATGCGGAGATGGCGTGTTGTTGT
rJMFF012F11+ TGCACATCCTCGGACCTCGAGTTTGATTGGACCACTGATGCGGAGATGGCGTGTTGTTGT
                      ____________________________________________________________
consensus TGCACATCCTCGGACCTCGAGTTTGATTGGACCACTGATGCGGAGATGGCGTGTTGTTGT
 
. : . : . : . : . : . :
JMFF012F11- TCTTCTAGTGACGAGGTGAATAGTATGTTGTTGGAGTATTCTGCAGATGAAATCGAAGAT
rJMFF012F11+ TCTTCTAGTGACGAGGTGAATAGTATGTTGTTGGAGTATTCTGCAGATGAAATCGAAGAT
                      ____________________________________________________________
consensus TCTTCTAGTGACGAGGTGAATAGTATGTTGTTGGAGTATTCTGCAGATGAAATCGAAGAT
 
. : . : . : . : . : . :
JMFF012F11- GCGGTTATGTTTGTGGGGATTGAGCAGCATCATACGCAATTCTGGGATGGAGTTTTCTTG
rJMFF012F11+ GCGGTTATGTTTGTGGGGATTGAGCAGCATCATACGCAATTCTGGGATGGAGTTTTCTTG
                      ____________________________________________________________
consensus GCGGTTATGTTTGTGGGGATTGAGCAGCATCATACGCAATTCTGGGATGGAGTTTTCTTG
 
. : . : . : . : . : . :
JMFF012F11- GAGG
rJMFF012F11+ GAGGAACATGGGTATAGTTCCTTGTGGCAAGAACCTTATAGCTCACTGTAATATAATAGT
                      ____________________________________________________________
consensus GAGGAACATGGGTATAGTTCCTTGTGGCAAGAACCTTATAGCTCACTGTAATATAATAGT
 
. : . : . : . : . : . :
rJMFF012F11+ CCTGGGATCATTTCAAGCTTTGATTTCAAAAGGATTCATTCTATTTCACTTGTAGATCCT
                      ____________________________________________________________
consensus CCTGGGATCATTTCAAGCTTTGATTTCAAAAGGATTCATTCTATTTCACTTGTAGATCCT
 
. : . : . : . : . : . :
rJMFF012F11+ TCCAACTTATATAATGCCACAAAGAATATTTGATTTTGGCACAACAACTTTGATTCAATG
                      ____________________________________________________________
consensus TCCAACTTATATAATGCCACAAAGAATATTTGATTTTGGCACAACAACTTTGATTCAATG