Contig 008179:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011P22Sequence556003412 (6)ref|XP_009758418.1|4e-50PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]755008179 (5)ref|XP_011035631.1|3e-24PREDICTED: plastidic ATP/ADP-transporter-like [Populus euphratica]
JMFF013G07Sequence614003412 (6)ref|XP_009758418.1|8e-46PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]624008179 (5)ref|XP_006427151.1|2e-62hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth
JMFF035A24Sequence477007429 (11)637008179 (5)ref|NP_001274794.1|2e-41plastidic ATP/ADP-transporter [Solanum tuberosum] sp|O24381.2|TLC1_SOLTU RecName
JMSF005F18Sequence440000573 (73)ref|WP_000709870.1|1e-69MULTISPECIES: periplasmic copper- and silver-binding protein [Enterobacteriacea392008179 (5)
JMSF039M19Sequence669003412 (6)ref|XP_009758418.1|6e-78PREDICTED: plastidic ATP/ADP-transporter-like [Nicotiana sylvestris]750008179 (5)ref|XP_006427151.1|3e-64hypothetical protein CICLE_v10025170mg [Citrus clementina] gb|ESR40391.1| hypoth

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF013G07+ GGTGACCCACTAG
rJMSF039M19+ TGGTGACCCACTAG
                      ____________________________________________________________
consensus TGGTGACCCACTAG
 
. : . : . : . : . : . :
rJMFF013G07+ CACNTTCTCTTGCAAAGTTTGGGATGACCCNTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
rJMSF039M19+ CACCTTCTCTTGCAAAGTTTGGGATGACCCCTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
                      ____________________________________________________________
consensus CACCTTCTCTTGCAAAGTTTGGGATGACCCCTCTCCTGGCAGCTGTGTTTGTGGGTGCAA
 
. : . : . : . : . : . :
rJMFF013G07+ TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
rJMSF039M19+ TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
rJMFF035A24+ AAGGAAATGG
                      ____________________________________________________________
consensus TGCAGAACATTTTCAGTAAGAGTGCGAAATACAGCTTGTTTGATCCTTGCAAGGAAATGG
 
. : . : . : . : . : . :
rJMFF013G07+ CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMSF039M19+ CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMFF035A24+ CATTCATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
rJMFF011P22+ CCAAGGTTAANTGAAAGGCAGCAATTGATGTTGTGT
                      ____________________________________________________________
consensus CATACATTCCTTTAGATGAAGACACCAAGGTTAAGGGAAAGGCAGCAATTGATGTTGTGT
 
. : . : . : . : . : . :
rJMFF013G07+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMSF039M19+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMFF035A24+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
rJMFF011P22+ GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
                      ____________________________________________________________
consensus GCAACCCATTGGGAAAGTCAGGGGGTGCTTTGATACAGCAATTCATGATTTTAAGTTTTG
 
. : . : . : . : . : . :
rJMFF013G07+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
rJMSF039M19+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
rJMFF035A24+ GTTCTCTTGCTAACTGAACTCCCTACCTCGGAGGTGATCTATTGGTGATTGTTGTTGCAT
rJMFF011P22+ GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
                      ____________________________________________________________
consensus GTTCTCTTGCTAACTCAACTCCCTACCTCGGAGGTGTTCTATTGGTGATTGTTGTTGCAT
 
. : . : . : . : . : . :
rJMFF013G07+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMSF039M19+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMFF035A24+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
rJMSF005F18+ CAGTGCGTTGAGGCAAGAAGAAGAGC
rJMFF011P22+ GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
                      ____________________________________________________________
consensus GGTTGGCGGCAGCAAGGTCGTTGGATGGGCAGTTCAGTGCGTTGAGGCAAGAAGAAGAGC
 
. : . : . : . : . : . :
rJMFF013G07+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMSF039M19+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMFF035A24+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
rJMSF005F18+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGATCCCCTGTTGTGTCTCAAGATGGAAAT
rJMFF011P22+ TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
                      ____________________________________________________________
consensus TGGAGAAGGAGATGGAGCGATCAGCTGTGAAGAT-CCCTGTTGTGTCTCAAGATGGAAAT
 
. : . : . : . : . : . :
rJMFF013G07+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMSF039M19+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMFF035A24+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTNTCAG
rJMSF005F18+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
rJMFF011P22+ GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
                      ____________________________________________________________
consensus GGTTCTCTATACCCAGGAGGAGGCGACTCGGCTAGCGCTTCCTCTGAGCCCTCCTCTCAG
 
. : . : . : . : . : . :
rJMFF013G07+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMSF039M19+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMFF035A24+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMSF005F18+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
rJMFF011P22+ CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
                      ____________________________________________________________
consensus CGCCAGGTGTAAACAAGAAAAGGCTAGATATTATATCAACTATCAAGTGGATGGGGTATG
 
. : . : . : . : . : . :
rJMFF013G07+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMSF039M19+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMFF035A24+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMSF005F18+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
rJMFF011P22+ CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
                      ____________________________________________________________
consensus CATGTGTTGGTGTTAGGTGTAGCCATTGACCCTCGCTCGCTGGCTGGCTGGCTGGCTAGT
 
. : . : . : . : . : . :
rJMFF013G07+ AGAAATAAAACA
rJMSF039M19+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMFF035A24+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMSF005F18+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
rJMFF011P22+ AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
                      ____________________________________________________________
consensus AGAAATAAAACATGAATACAGATGGCTTTTACTGATTAGATTTAGTAGCAATTTGTTGTG
 
. : . : . : . : . : . :
rJMSF039M19+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMFF035A24+ CTGGCTGGGAATCATAGTTGCAGGATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMSF005F18+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
rJMFF011P22+ CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
                      ____________________________________________________________
consensus CTGGCTGGGAATCATAGTTGCAGAATTATTGTGTTTGTTGTAGTTACATACATACATACA
 
. : . : . : . : . : . :
rJMSF039M19+ TACTGCCTCAA
rJMFF035A24+ TACTGCCTCAACTCAAGATCCAAATGCA
rJMSF005F18+ TACTGC
rJMFF011P22+ TACTGCCTCAACTCAAGATCCAAATGCAGGAGGTTGCGTTTCGATTGTTTGATCAAATTG
                      ____________________________________________________________
consensus TACTGCCTCAACTCAAGATCCAAATGCAGGAGGTTGCGTTTCGATTGTTTGATCAAATTG
 
. : . : . : . : . : . :
rJMFF011P22+ TGCCGTGTACTCTATCTAGCCCATACGCCTGACCCAAGATAATCTGGGAAGATGGCCAGA
                      ____________________________________________________________
consensus TGCCGTGTACTCTATCTAGCCCATACGCCTGACCCAAGATAATCTGGGAAGATGGCCAGA
 
. : . : . : . : . : . :
rJMFF011P22+ AAAAGTCAAACAAAGTATAGACACATACATAATATGTCAATTGTAATAGACATATAATTT
                      ____________________________________________________________
consensus AAAAGTCAAACAAAGTATAGACACATACATAATATGTCAATTGTAATAGACATATAATTT