| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005D04 | Sequence | 470 | 003070 (3) | emb|CDO98225.1| | 2e-07 | unnamed protein product [Coffea canephora] | 743 | 008167 (6) | ref|XP_007023426.1| | 3e-78 | CBL-interacting protein kinase 25 [Theobroma cacao] gb|EOY26048.1| CBL-interacti |
| JMFF010B18 | Sequence | 488 | 008167 (6) | ref|XP_007023426.1| | 5e-49 | CBL-interacting protein kinase 25 [Theobroma cacao] gb|EOY26048.1| CBL-interacti | 744 | 008167 (6) | ref|XP_007023426.1| | 1e-69 | CBL-interacting protein kinase 25 [Theobroma cacao] gb|EOY26048.1| CBL-interacti |
| JMFF018A01 | Sequence | 613 | 003070 (3) | ref|XP_009793885.1| | 1e-33 | PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Nicotiana s | 628 | 008167 (6) | ref|XP_007023426.1| | 8e-86 | CBL-interacting protein kinase 25 [Theobroma cacao] gb|EOY26048.1| CBL-interacti |
| JMFF051B24 | Sequence | 519 | 008167 (6) | emb|CDO98225.1| | 1e-71 | unnamed protein product [Coffea canephora] | 230 | 008167 (6) | ref|XP_007136949.1| | 5e-13 | hypothetical protein PHAVU_009G087500g [Phaseolus vulgaris] dbj|BAG06677.1| prot |
This contig is upended
. : . : . : . : . : . :
rJMFF005D04+ TCTCTATGCTTNGTTGGCCG
____________________________________________________________
consensus TCTCTATGCTTNGTTGGCCG
. : . : . : . : . : . :
JMFF010B18- TATAGAAAAATGTTCAAATCAC
JMFF051B24- TATAGAAAAATGTTCAAATCAC
rJMFF005D04+ GTTTTCTTCCATTTCAAGACGAAAATATGATGACAATGTATAGAAAAATGTTCAAATCAC
rJMFF010B18+ TATAGAAAAATGTTCAAATCAC
____________________________________________________________
consensus GTTTTCTTCCATTTCAAGACGAAAATATGATGACAATGTATAGAAAAATGTTCAAATCAC
. : . : . : . : . : . :
JMFF010B18- AGTTTGAATTTCCGCCATGGTTTTCCCCGGAATCCAAGAGGCTAATTTCCAAGATCCTAG
JMFF051B24- AGTTTGAATTTCCGCCATGGTTTTCCCCGGAATCCAAGAGGCTAATTTCCAAGATCCTAG
rJMFF005D04+ AGTTTGAATTTCCGCCATGGTTTTCCCCGGAATCCAAGAGGCTAATTTCCAAGATCCTAG
rJMFF018A01+ AAGAGGCTAATTTCCAAGATCCTAG
rJMFF010B18+ AGTTTGAATTTCCGCCATGGTTTTCCCCGGAATCCAAGAGGCTAATTTCCAAGATCCTAG
____________________________________________________________
consensus AGTTTGAATTTCCGCCATGGTTTTCCCCGGAATCCAAGAGGCTAATTTCCAAGATCCTAG
. : . : . : . : . : . :
JMFF010B18- TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTCTAA
JMFF051B24- TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTCTAA
rJMFF005D04+ TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTCTAA
rJMFF018A01+ TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTNTAA
rJMFF010B18+ TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTCTAA
____________________________________________________________
consensus TCCCAGATCCTGACCGGAGAATCAAGATTCCGGCCATCATGAGAGCCCCCTGGTTTCTAA
. : . : . : . : . : . :
JMFF010B18- AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
JMFF051B24- AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
rJMFF005D04+ AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
rJMFF018A01+ AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
rJMFF010B18+ AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
____________________________________________________________
consensus AGGGATTCAAATTTCCAATTCAAGATGATCCTGAGGAGGAGATTAAGGAACCGGGTTCTC
. : . : . : . : . : . :
JMFF010B18- AAATAACCTCCAAAT-CATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
JMFF051B24- AAATAACCTCCAAAT-CATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
rJMFF005D04+ AAATAACCTCCAAATCCATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
rJMFF018A01+ AAATAACCTCCAAAT-CATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
rJMFF010B18+ AAATAACCTCCAAATCCATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
____________________________________________________________
consensus AAATAACCTCCAAAT-CATCCCCGCCGTTCTTCAACGCGTTCGAGCTAATCTCCTCAATG
. : . : . : . : . : . :
JMFF010B18- GCTTCCGGGTTCCGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
JMFF051B24- GCTTCCGGGTT-CGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
rJMFF005D04+ GCTTCCGGGTT-CGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
rJMFF018A01+ GCTTCCGGGTT-CGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
rJMFF010B18+ GCTTCCGGGTT-CGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
____________________________________________________________
consensus GCTTCCGGGTT-CGACCTGTCGGGCCTCTTCGAGACCCGCCGGAATTCTGGGTCACTTTT
. : . : . : . : . : . :
JMFF010B18- CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
JMFF051B24- CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
rJMFF005D04+ CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
rJMFF018A01+ CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
rJMFF010B18+ CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
____________________________________________________________
consensus CACGTCAAAATGTTCCCCTCCTGATATCCTGGCGAAGCTGGAATCGCTGGCCAAGAAGCT
. : . : . : . : . : . :
JMFF010B18- GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
JMFF051B24- GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
rJMFF005D04+ GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
rJMFF018A01+ GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
rJMFF010B18+ GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
____________________________________________________________
consensus GAATTTTAGAATTGCGTGCGCCAAGGAGTTCAAGGTGAAGATGCAGGGGAATTCCGAAGG
. : . : . : . : . : . :
JMFF010B18- GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCG
JMFF051B24- GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCGCCGGAGGTGACGGT
rJMFF005D04+ GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCGCCGGAGGTGACGGT
rJMFF018A01+ GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCGCCGGAGGTGACGGT
rJMFF010B18+ GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCGCCGGAGGTGACGGT
____________________________________________________________
consensus GCGGAAGGGGAAGCTCTCGGTGACCGCCGAGATGTTCGAAGTGGCGCCGGAGGTGACGGT
. : . : . : . : . : . :
JMFF051B24- GGTCGAGTTCTCAAAGTC
rJMFF005D04+ GGTCGAGTTCTCAAAGTCCGCCGGCGACACGTTGGAGTATAGGAAGTTCTGCGATGAAGA
rJMFF018A01+ GGTCGAGTTCTCAAAGTCCGCCGGCGACACGTTGGAGTATAGGAAGTTCTGCGATGAAGA
rJMFF051B24+ TCAAAGTCCGCCGGCGACACGTTGGAGTATAGGAAGTTCTGCGATGAAGA
rJMFF010B18+ GGTCGAGTTCTCAAAGTCCGCCGGCGACACGTTGGAGTATAGGAAGTTCTGCGATGAAGA
____________________________________________________________
consensus GGTCGAGTTCTCAAAGTCCGCCGGCGACACGTTGGAGTATAGGAAGTTCTGCGATGAAGA
. : . : . : . : . : . :
rJMFF005D04+ CGTTAGACCTGCGCTTAAAGACATCGTTTGGACATGGCAGGGTGAGAGTAACTGTCAAAG
rJMFF018A01+ CGTTAGACCTGCGCTTAAAGACATCGTTTGGACATGGCAGGGTGAGAGTAACTGTCAAAG
rJMFF051B24+ CGTTAGACCTGCGCTTAAAGACATCGTTTGGACATGGCAGGGTTAGAGTAACTGTCAAAG
rJMFF010B18+ CGTTAGACCTGCGCTTAAAGACATCGTTTGGACATGGCAGGGTTAGAGTAACTGTCAAAG
____________________________________________________________
consensus CGTTAGACCTGCGCTTAAAGACATCGTTTGGACATGGCAGGGTTAGAGTAACTGTCAAAG
. : . : . : . : . : . :
rJMFF005D04+ TTA-ACCGTATAATGGTAGGCTCTGTAATTATAGGTCCATGCGAGATAAAATAGTTATTG
rJMFF018A01+ TTA-ACCGTATAATGGTAGGCTCTGTAATTATAGGTCCATGCGAGATAAAATAGTTATTG
rJMFF051B24+ TTAGGCCGTATAATGGTAGGCTCTGTAATTATAGGTCCATGCGAGATAAAATAGTTATTG
rJMFF010B18+ TTA-ACCGTATAATGGTAGGCTCTGTAATTATAGGTCCATGCGAGATAAAATAGTTATTG
____________________________________________________________
consensus TTA-ACCGTATAATGGTAGGCTCTGTAATTATAGGTCCATGCGAGATAAAATAGTTATTG
. : . : . : . : . : . :
rJMFF005D04+ TAAGT
rJMFF018A01+ TAAGT
rJMFF051B24+ TAAGTTGAGGTTGAATTTTGTGAATAGGGGGTGATTATGTAAACTTCAATTATACCACCA
rJMFF010B18+ TAAGTTGAGGTTGAATTTTGTGAATAGGGGGTGATTATGTAAACTTCACTTATACCACCA
____________________________________________________________
consensus TAAGTTGAGGTTGAATTTTGTGAATAGGGGGTGATTATGTAAACTTCACTTATACCACCA