clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF002D24 | Sequence | 639 | 008166 (11) | ref|XP_011084738.1| | 6e-102 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] | |||||
JMFF004P10 | Sequence | 179 | 009164 (9) | 739 | 008166 (11) | ref|XP_011084738.1| | 1e-116 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] | |||
JMFF009P11 | Sequence | 588 | 009164 (9) | ref|XP_006363983.1| | 5e-16 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum] | 747 | 008166 (11) | ref|XP_011084738.1| | 3e-115 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] |
JMFF012F23 | Sequence | 551 | 009164 (9) | 740 | 008166 (11) | ref|XP_011084738.1| | 1e-116 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] | |||
JMFF020E22 | Sequence | 605 | 009164 (9) | ref|XP_006363983.1| | 9e-15 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum] | 721 | 008166 (11) | ref|XP_011084738.1| | 7e-121 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] |
JMFF033P22 | Sequence | 102 | 009164 (9) | 391 | 008166 (11) | ref|XP_011084738.1| | 1e-48 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] | |||
JMFF044E21 | Sequence | 631 | 009164 (9) | ref|XP_006363983.1| | 1e-83 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)]-like [Solanum tuberosum] | 490 | 008166 (11) | ref|XP_011084738.1| | 2e-56 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] |
JMSF002E17 | Sequence | 415 | 009164 (9) | gb|EYU24339.1| | 3e-05 | hypothetical protein MIMGU_mgv1a001833mg [Erythranthe guttata] | 716 | 008166 (11) | ref|XP_011084738.1| | 1e-116 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)], partial [Sesamum indicum] |
JMSF023N22 | Sequence | 627 | 009164 (9) | ref|XP_009628662.1| | 9e-109 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana tomentosiformis | 746 | 008166 (11) | ref|XP_009804888.1| | 9e-131 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris] |
JMSF042K04 | Sequence | 749 | 008166 (11) | ref|XP_009804888.1| | 3e-152 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris] | 708 | 008166 (11) | ref|XP_009804888.1| | 7e-130 | PREDICTED: dihydropyrimidine dehydrogenase [NADP(+)] [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMSF042K04- AGATGGGTGCTGCTGTTGGACAAGATTGTGAACTGTTGGAGGAG
____________________________________________________________
consensus AGATGGGTGCTGCTGTTGGACAAGATTGTGAACTGTTGGAGGAG
. : . : . : . : . : . :
rJMSF023N22+ GCAAAGATGACACCAAAC
rJMSF042K04+ GCAAAGATGACACCAAAC
JMSF042K04- GTATGTGGATGGATTAATGCCATTGCTACTGTCCCTGTTTGGGCAAAGATGACACCAAAC
____________________________________________________________
consensus GTATGTGGATGGATTAATGCCATTGCTACTGTCCCTGTTTGGGCAAAGATGACACCAAAC
. : . : . : . : . : . :
rJMSF023N22+ GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMSF042K04+ GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
JMSF042K04- GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMSF002E17+ AAATCAGGATGTGAGGGGGTGGCT
rJMFF012F23+ CTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF004P10+ CTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF020E22+ CAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
rJMFF009P11+ CTTAAATCAGGATGTGAGGGGGTGGCT
____________________________________________________________
consensus GTTACTGACATTACAAAGCCAGCTAGGGTGTCTCTTAAATCAGGATGTGAGGGGGTGGCT
. : . : . : . : . : . :
rJMSF023N22+ GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
rJMSF042K04+ GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
JMSF042K04- GCCATAAATACAATCATGAGTGTCATGGGGATAAATCTGAATACTTTACGTCCTGAGCCT
rJMSF002E17+ GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF002D24+ GGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF012F23+ GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF004P10+ GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF020E22+ GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
rJMFF009P11+ GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCNT
____________________________________________________________
consensus GCCATAAATACAATAATGAGTGTCATGGGCATCAATCTGGATACTTTACGTCCCGAGCCT
. : . : . : . : . : . :
rJMSF023N22+ TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
rJMSF042K04+ TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
JMSF042K04- TGTGTTGAAGGATATTCAACTCCTGGAGGCTATTCTTCAAAGGCAGTGCATCCAATTGCT
rJMSF002E17+ TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF002D24+ NGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF012F23+ TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF004P10+ TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF020E22+ TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
rJMFF009P11+ TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
____________________________________________________________
consensus TGTGTTGAAGGATATTCAACTCCCGGAGGCTATTCTTCGAAGGCAGTGCATCCAATTGCT
. : . : . : . : . : . :
rJMSF023N22+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
rJMSF042K04+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
JMSF042K04- CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCTGAATTTGGGGATCAAGGCTAT
rJMSF002E17+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF002D24+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF012F23+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF004P10+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF033P22+ CGAATTCGGGGATCAAGGCTAT
rJMFF020E22+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
rJMFF009P11+ CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
____________________________________________________________
consensus CTTGCAAAAGTGATGAACATTGCACAGATGATGAAATCCGAATTCGGGGATCAAGGCTAT
. : . : . : . : . : . :
rJMSF023N22+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMSF042K04+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
JMSF042K04- TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMSF002E17+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF002D24+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF012F23+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGGGATGCTGCTGAGTTTATACTTCTT
rJMFF004P10+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF033P22+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGNGATGCTGCTGAGTTTATACTTCTT
rJMFF020E22+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
rJMFF009P11+ TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
____________________________________________________________
consensus TCCCTCTCTGGTATTGGAGGAGTTGAAACAGGTGGCGATGCTGCTGAGTTTATACTTCTT
. : . : . : . : . : . :
rJMSF023N22+ GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMSF042K04+ GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMFF044E21+ CGTTATGATGCATGGATATGGACTAGTTAAG
JMSF042K04- GGAGCAGATACTGTGCAGGTTTGCACAGGCGTTATGATGCATGGATATGGACTAGTTAAG
rJMSF002E17+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF002D24+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGATAAG
rJMFF012F23+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF004P10+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF033P22+ GGAGCAGATACTGNGCAGG-TTGCACAGGAGTGATGATGCANGGATATGGACTAGTTAAG
rJMFF020E22+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
rJMFF009P11+ GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
____________________________________________________________
consensus GGAGCAGATACTGTGCAGGTTTGCACAGGAGTGATGATGCATGGATATGGACTAGTTAAG
. : . : . : . : . : . :
rJMSF023N22+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMSF042K04+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF044E21+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
JMSF042K04- AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMSF002E17+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF002D24+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF012F23+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF004P10+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF033P22+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF020E22+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
rJMFF009P11+ AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
____________________________________________________________
consensus AAGCTATGTTCTGAGCTCAGAGATTTCATGAAAAAGCATAATTTTTCATCGATAGAAGAG
. : . : . : . : . : . :
rJMSF023N22+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMSF042K04+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMFF044E21+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
JMSF042K04- TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTCAAAAGACAGCAA
rJMSF002E17+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF002D24+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF012F23+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF004P10+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF033P22+ TTTAAAGGAGTNTCACTTCCATACTNCACAACTCATATGGATTNGGTGAAAAGACAGCAA
rJMFF020E22+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
rJMFF009P11+ TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
____________________________________________________________
consensus TTTAAAGGAGTTTCACTTCCATACTTCACAACTCATATGGATTTGGTGAAAAGACAGCAA
. : . : . : . : . : . :
rJMSF023N22+ GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMSF042K04+ GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMFF044E21+ GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
JMSF042K04- GAAGCAATACGGGAAAGGAAAGCTATTAAGAAAGGATTGCAGTCCGACAAAGACTGGACA
rJMSF002E17+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF002D24+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF012F23+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF004P10+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF033P22+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF020E22+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
rJMFF009P11+ GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
____________________________________________________________
consensus GAAGCAATGCGCGAAAGGAAAGCTATTAAGAAAGGATTGCAATCTGACAAAGACTGGACA
. : . : . : . : . : . :
rJMSF023N22+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMSF042K04+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF044E21+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
JMSF042K04- GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMSF002E17+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF002D24+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF012F23+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF004P10+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTATCTTTCC
rJMFF033P22+ GGAGATGGTTTTGTTCAAGAANCTGAGAGTATGGTTTCCACCTGATTAATGTGTCTTTC
rJMFF020E22+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
rJMFF009P11+ GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
____________________________________________________________
consensus GGAGATGGTTTTGTTCAAGAAACTGAGAGTATGGTTTCCAACTGATTAATGTGTCTTTCC
. : . : . : . : . : . :
rJMSF023N22+ CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT
rJMSF042K04+ CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT
rJMFF044E21+ CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATT
JMSF042K04- CCTTGTATTCTAA-AAATAAAAGAACCTCCTATTTACCTGATTAGG
rJMSF002E17+ ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF002D24+ ACTTCTATTCTAACAAATAAAAGAACCTCNTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF012F23+ ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATT
rJMFF004P10+ ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATT
rJMFF020E22+ ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
rJMFF009P11+ ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
____________________________________________________________
consensus ACTTCTATTCTAACAAATAAAAGAACCTCCTATGTACCTGATTTGGGTGAGGTCCATTTC
. : . : . : . : . : . :
rJMSF002E17+ TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
rJMFF002D24+ TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATNTATGATGAAAATAAAT
rJMFF020E22+ TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
rJMFF009P11+ TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
____________________________________________________________
consensus TTTTCTGTGGTTGGTATCACTGTTTATTTATTTCTAATGTAATTTATGATGAAAATAAAT
. : . : . : . : . : . :
rJMSF002E17+ TGTGCT
rJMFF002D24+ TGTGC
rJMFF020E22+ TGTGCTAAGATGGT
rJMFF009P11+ TGTGCTAAGATGGTATGTAGTGACATCTCTCATGTGGGAGGTCATTAGGTTGAGAAAGTA
____________________________________________________________
consensus TGTGCTAAGATGGTATGTAGTGACATCTCTCATGTGGGAGGTCATTAGGTTGAGAAAGTA