| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF006O05 | Sequence | 484 | 010589 (4) | ref|XP_009772092.1| | 7e-61 | PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvat | 801 | 008140 (4) | emb|CBI27032.3| | 2e-111 | unnamed protein product [Vitis vinifera] |
| JMFF034C02 | Sequence | 506 | 010589 (4) | ref|XP_009772092.1| | 1e-46 | PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvat | 262 | 008140 (4) | |||
| JMSF008I23 | Sequence | 280 | 010589 (4) | 674 | 008140 (4) | emb|CBI27032.3| | 6e-111 | unnamed protein product [Vitis vinifera] | |||
| JMSF014D15 | Sequence | 467 | 010589 (4) | ref|XP_009772092.1| | 2e-37 | PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvat | 746 | 008140 (4) | emb|CBI27032.3| | 2e-104 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMSF008I23+ CAGCAAAGCAGGCTGCGGTTTNCAAGAACATGTTAGATAGCCTCT
____________________________________________________________
consensus CAGCAAAGCAGGCTGCGGTTTNCAAGAACATGTTAGATAGCCTCT
. : . : . : . : . : . :
rJMSF008I23+ CTGTACCCACCTNTTCGTGTTGGGTATCCCATTTCTACTGATGCCCTTGATGCTCTCTAT
rJMFF006O05+ GATGCCCTGGATGCTCTCTAT
____________________________________________________________
consensus CTGTACCCACCTNTTCGTGTTGGGTATCCCATTTCTACTGATGCCCTTGATGCTCTCTAT
. : . : . : . : . : . :
rJMSF008I23+ GCGAAGGTTAAGTCCGAGGGAGTCACTATGACCGCATTGTTAGCCAAAGCTGCAGCGATG
rJMSF014D15+ AGGGAGTCACTATGACCGCATTGTTAGCCAAAGCTGCAGCGATG
rJMFF006O05+ GCGAAGGTTAAGTCCAAGGGAGTCACTATGACCGCATTGTTAGCCAAAGCTGCAGCGATG
____________________________________________________________
consensus GCGAAGGTTAAGTCCGAGGGAGTCACTATGACCGCATTGTTAGCCAAAGCTGCAGCGATG
. : . : . : . : . : . :
rJMSF008I23+ GCATTGGCTCAACATCCGGTTGTGAATGCAACTNGCAAGGACGGGAAGTGTTTTACTTAC
rJMSF014D15+ GCATTGGCTCAACATCCGGTTGTGAATGCAACTTGCAAGGACGGGAAGTGTTTTACTTAC
rJMFF006O05+ GCATTGGCTCAACATCCGGTTGTGAATGCAACTTGCAAGGACGGGAAGTGTTTTACTTAC
____________________________________________________________
consensus GCATTGGCTCAACATCCGGTTGTGAATGCAACTTGCAAGGACGGGAAGTGTTTTACTTAC
. : . : . : . : . : . :
rJMSF008I23+ AATANCAGCATAAATATTGCTGTTGCAGTGTCTATTAATGGCGGATTGATAACCCCTGTN
rJMSF014D15+ AATAGCAGCATAAATATTGCTGTTGCAGTGTCTATTAATGGCGGATTGATAACCCCTGTA
rJMFF006O05+ AATAGCAGCATAAATATTGCTGTTGCAGTGTCTATTAATGGCGGATTGATAACCCCTGTA
____________________________________________________________
consensus AATAGCAGCATAAATATTGCTGTTGCAGTGTCTATTAATGGCGGATTGATAACCCCTGTA
. : . : . : . : . : . :
rJMSF008I23+ CTTGAGGATGCTGACAAGTNGGACCTGTATTTGTTGTCTCAAAAGTGGAAGGAACTGGTA
rJMSF014D15+ CTTGAGGATGCTGACAAGTTGGACCTGTATTTGTTGTCTCAAAAGTGGAAGGAACTGGTA
rJMFF006O05+ CTTGAGGATGCTGACAAGTTGGACCTGTATTTGTTGTCTCAAAAGTGGAAGGAACTGGTA
____________________________________________________________
consensus CTTGAGGATGCTGACAAGTTGGACCTGTATTTGTTGTCTCAAAAGTGGAAGGAACTGGTA
. : . : . : . : . : . :
rJMSF008I23+ GAGAAGGCTCGGGCTAAAAAACTTCAACCACACGAGTATAGTACAGGGACTTTCACATTA
rJMSF014D15+ GAGAAGGCTCGGGCTAAAAAACTTCAACCACACGAGTATAGTACAGGGACTTTCNCATTA
rJMFF006O05+ GAGAAGGCTCGGGCTAAAAAACTTCAACCACACGAGTATAGTACAGGGACTTTCACATTA
____________________________________________________________
consensus GAGAAGGCTCGGGCTAAAAAACTTCAACCACACGAGTATAGTACAGGGACTTTCACATTA
. : . : . : . : . : . :
rJMSF008I23+ TCAAACCTGGGAATGTTTGGTGTGGATAGATTTGATGCTATTCTTCCTCCAGGCCAGGGA
rJMSF014D15+ TCAAACCTGGGAATGTTTGGTGTGGATAGATTTGATGCTATTCTTCCTCCAGGCCAGGGA
rJMFF006O05+ TCAAACCTGGGAATGTTTGGTGTGGATAGATTTGATGCTATTCTTCCTCCAGGCCAGGGA
____________________________________________________________
consensus TCAAACCTGGGAATGTTTGGTGTGGATAGATTTGATGCTATTCTTCCTCCAGGCCAGGGA
. : . : . : . : . : . :
rJMSF008I23+ GCTATTATGGCTGTTGAAGCATCAAAACCTACTGTTGTTACTGATGCTGACGGATTCTTT
rJMSF014D15+ GCTATTATGGCTGTTGGAGCATCAAAACCTACTGTTGTTACTGATGCTGACGGATTCTTT
rJMFF006O05+ GCTATTATGGCTGTTGGAGCATCAAAACCTACTGTTGTTACTGATGCTGACGGATTCTTT
____________________________________________________________
consensus GCTATTATGGCTGTTGGAGCATCAAAACCTACTGTTGTTACTGATGCTGACGGATTCTTT
. : . : . : . : . : . :
rJMSF008I23+ AGCGTCAAAAACAGGANGCTGGTAAATGTCACAGCTGATCACCGAATCATCTACGGTGCT
rJMSF014D15+ AGCGTCAAAAACAGGATGCTGGTAAATGTCACAGCTGATCACCGAATCATCTACGGTGCT
rJMFF006O05+ AGCGTCAAAAACAGGATGCTGGTAAATGTCACAGCTGATCACCGAATCATCTACGGTGCT
____________________________________________________________
consensus AGCGTCAAAAACAGGATGCTGGTAAATGTCACAGCTGATCACCGAATCATCTACGGTGCT
. : . : . : . : . : . :
rJMSF008I23+ GACTTGGCTGCCTTCCTTCAAACGTTTTCAAAGATTGTCGAGAACCCTGACAGTTCGACA
rJMFF034C02+ TGGCTGCCTTCCTTCAAACGTTTTCAAAGATTGTCGAGAACCCTGACAGTTTGACA
rJMSF014D15+ GACTTGGCTGCCTTCCTTCAAACGTTTTCAAAGATTGTCGAGAACCCTGACAGTTTGACA
rJMFF006O05+ GACTTGGCTGCCTTCCTTCAAACGTTTTCAAAGATTGTCGAGAACCCTGACAGTTTGACA
____________________________________________________________
consensus GACTTGGCTGCCTTCCTTCAAACGTTTTCAAAGATTGTCGAGAACCCTGACAGTTTGACA
. : . : . : . : . : . :
rJMSF008I23+ ATGTAGATGGTGAGTATAGAGA
rJMFF034C02+ ATGTAGATGGTGAGTATAGAGACTGATCAAGTATCTTTTTACTGCCATGCCAACCAGACT
rJMSF014D15+ ATGTAGATGGTGAGTATAGAGACTGATCAAGTATCTTTTTACTGCCATGCCAACCAGACT
rJMFF006O05+ ATGTAGATGGTGAGTATAGAGACTGATCAAGTATCTTTTTACTGCCATGCCAACCAGACT
____________________________________________________________
consensus ATGTAGATGGTGAGTATAGAGACTGATCAAGTATCTTTTTACTGCCATGCCAACCAGACT
. : . : . : . : . : . :
rJMFF034C02+ ATTTGGGCTTAGAAAAGAAAGATTGATNGAAAGATAATGGTTCTTCATTTCTAGCAATAT
rJMSF014D15+ ATTTGGGCTTAGAAAAGAAAGATTGATTGAAAGATAATGGTTCTTCATTTCTAGCAATAT
rJMFF006O05+ ATTTGGGCTTAGAAAAGAAAGATTGATTGAAAGATAATGGTTCTTCATTTCTAGCAATAT
____________________________________________________________
consensus ATTTGGGCTTAGAAAAGAAAGATTGATTGAAAGATAATGGTTCTTCATTTCTAGCAATAT
. : . : . : . : . : . :
rJMFF034C02+ TTTGCTACAATGTATCCTGTGTACTTTTTCATTATTTTTTTTTCTTTTGCTTTTTTCCTT
rJMSF014D15+ TTTGCTACAATGTATCCTGTGTACTTTTTCATTATTTTTTTTTCTTTTGCTTTTTTCCTT
rJMFF006O05+ TTTGCTACAATGTATCCTGTGTACTTTTTCATTATTTTTTTTTCTTTTGCTTTTTTCCTT
____________________________________________________________
consensus TTTGCTACAATGTATCCTGTGTACTTTTTCATTATTTTTTTTTCTTTTGCTTTTTTCCTT
. : . : . : . : . : . :
rJMFF034C02+ TGGGTGCAAGGAGAGACATTTAC
rJMSF014D15+ TGGGTGCAAGGAGAGACATTTAC
rJMFF006O05+ TGGGTGCAAGGAGAGACATTTACAGAGTTTTGTCAAAGTTTTGAAGGAAGGCAATAAATA
____________________________________________________________
consensus TGGGTGCAAGGAGAGACATTTACAGAGTTTTGTCAAAGTTTTGAAGGAAGGCAATAAATA