Contig 008112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP003E03Sequence430008112 (3)ref|XP_011072435.1|9e-35PREDICTED: clavaminate synthase-like protein At3g21360 [Sesamum indicum]
JMSF052O09Sequence650008112 (3)ref|XP_009606566.1|4e-104PREDICTED: clavaminate synthase-like protein At3g21360 [Nicotiana tomentosiform863008112 (3)ref|XP_006343036.1|6e-158PREDICTED: clavaminate synthase-like protein At3g21360-like [Solanum tuberosum]

Alignment

This contig is upended


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JMCP003E03+                                                            CACCCCAACCA
                      ____________________________________________________________
consensus                                                              CACCCCAACCA
 
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JMCP003E03+           AATTGTTCAAATTGTTAATCATAAAGTTATAAGTTCCATaCaCAATGAAATCCAGTTTTA
                      ____________________________________________________________
consensus             AATTGTTCAAATTGTTAATCATAAAGTTATAAGTTCCATTCTCAATGAAATCCAGTTTTA
 
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JMCP003E03+           TTgaTCCAGAGCAAGCAATACAAAGTATCTTGCATTTCTAAAAGCACTGATAATGTTATg
rJMSF052O09-                       AGCAATACAAAGTATCTTGCATTTCTAAAAGCACTGATAATGTTATC
                      ____________________________________________________________
consensus             TTCTTCCAGAGCAAGCAATACAAAGTATCTTGCATTTCTAAAAGCACTGATAATGTTATC
 
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JMCP003E03+           gaGtTtatGATACATGCCTCACTTTGTAATACAAACAATGTTGTACATTGCAAATTCCCA
rJMSF052O09-          CTGATATAGATACATGCCTCACTTTGTAATACAAACAATGTTGTACATTGCAAATTCCCA
                      ____________________________________________________________
consensus             CTGATATAGATACATGCCTCACTTTGTAATACAAACAATGTTGTACATTGCAAATTCCCA
 
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JMCP003E03+           GacagaAATGCTTCTATCACTTGCACAGTGAGGCaAcAAgtCGACGAGGAGGGAGGAATG
rJMSF052O09-          GTGTCTAATGCTTCTATCACTTGCACAGTGAGGCTAGAACACGACGAGGAGGGAGGAATG
                      ____________________________________________________________
consensus             GTGTCTAATGCTTCTATCACTTGCACAGTGAGGCTAGAACACGACGAGGAGGGAGGAATG
 
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JMCP003E03+           GTTTTCGAGCGTGAAGAACTGCCATAaaGTCAATCAGCAGAACAaCGCCTTTCTTCCtaG
rJMSF052O09-          GTTTTCGAGCATGAAGAACTGCCATATTGTCAATCAGCAGAACATCGCCTTTCTTCCATG
                      ____________________________________________________________
consensus             GTTTTCGAGCGTGAAGAACTGCCATATTGTCAATCAGCAGAACATCGCCTTTCTTCCATG
 
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JMCP003E03+           GAACCGCAACACTTTCCTCTTCCAAGATGGCTAGGCAGTCGTGTATGATTTCAGCAGGCA
rJMSF052O09-          GAACCGCAACACTTTCCTCTTCCAAGATGGCTAGGCAGTCGTGTATGATTTCAGCAGGCA
                      ____________________________________________________________
consensus             GAACCGCAACACTTTCCTCTTCCAAGATGGCTAGGCAGTCGTGTATGATTTCAGCAGGCA
 
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JMCP003E03+           AAGGCTTTCCATCCCCGAAAGTGACTGCCTTCaaaGGGTCGTTTCGCcCAagaTCgg   
rJMSF052O09-          AAGGCTTTCCATCCCCGAAAGTGACTGCCTTCTTTGGGTCGTTTCGCGCATCTTCCCAGC
                      ____________________________________________________________
consensus             AAGGCTTTCCATCCCCGAAAGTGACTGCCTTCTTTGGGTCGTTTCGCGCATCTTCCCAGC
 
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rJMSF052O09-          CAGTATATGCAGCCACCATGCTGTTGAACCATATCTTCCTCTGCCTAGTTTTGTCCACCT
                      ____________________________________________________________
consensus             CAGTATATGCAGCCACCATGCTGTTGAACCATATCTTCCTCTGCCTAGTTTTGTCCACCT
 
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rJMSF052O09-          TAATAGCCGGTATTGGCCCCATAACTGTTTTCACTCCACCATCATCGAGCCATTCCAGCT
                      ____________________________________________________________
consensus             TAATAGCCGGTATTGGCCCCATAACTGTTTTCACTCCACCATCATCGAGCCATTCCAGCT
 
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rJMSF052O09-          TCATCCCCAACTTCGCAGCCCTTTCCTCAGCAACACTCTTGTCTGAGGTCAAGAATGTGG
                      ____________________________________________________________
consensus             TCATCCCCAACTTCGCAGCCCTTTCCTCAGCAACACTCTTGTCTGAGGTCAAGAATGTGG
 
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rJMSF052O09-          ACTTCCAACCTCGGCCGATGGGGGATAAAGGGTTGTCTTCTTCACCCAAAACCCTAATGT
JMSF052O09+                     TCGGCCGATGGGGGATAAAGGGTTGTCTTCTTCACCCAAAACCCTAATGT
                      ____________________________________________________________
consensus             ACTTCCAACCTCGGCCGATGGGGGATAAAGGGTTGTCTTCTTCACCCAAAACCCTAATGT
 
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rJMSF052O09-          AGATTAACCCATGCTCCTCCAGTCTTTCAACGAACTCGGGATACTTGCTTTTCATCTTCT
JMSF052O09+           AGATTAACCCATGCTCCTCCAGTCTTTCAACGAACTCGGGATACTTGCTTTTCATCTTCT
                      ____________________________________________________________
consensus             AGATTAACCCATGCTCCTCCAGTCTTTCAACGAACTCGGGATACTTGCTTTTCATCTTCT
 
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rJMSF052O09-          CATACACAACATGACTAAGAACTATGGGTGTTTCCCCTGAACTTCCAGGTTCTACTTCAC
JMSF052O09+           CATACACAACATGACTAAGAACTATGGGTGTTTCCCCTGAACTTCCAGGTTCTACTTCAC
                      ____________________________________________________________
consensus             CATACACAACATGACTAAGAACTATGGGTGTTTCCCCTGAACTTCCAGGTTCTACTTCAC
 
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rJMSF052O09-          AGTAAAAAAACAATTTTGATGGATACTCTGGAACCTGAGCCATTTCATGGTGGAAAGGGA
JMSF052O09+           AGTAAAAAAACAATTTTGATGGATACTCTGGAACCTGAGCCATTTCATGGTGGAAAGGGA
                      ____________________________________________________________
consensus             AGTAAAAAAACAATTTTGATGGATACTCTGGAACCTGAGCCATTTCATGGTGGAAAGGGA
 
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rJMSF052O09-          TCTTCTGATCGGGAGGGGATTCATTTGCAGTGAAAACACGGCCGACAACGTTGGTCCGAG
JMSF052O09+           TCTTCTGATCGGGAGGGGATTCATTTGCAGTGAAAACACGGCCGACAACGTTGGTCCGAG
                      ____________________________________________________________
consensus             TCTTCTGATCGGGAGGGGATTCATTTGCAGTGAAAACACGGCCGACAACGTTGGTCCGAG
 
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rJMSF052O09-          GGGCGGCGCCGCCGACGTAGGGCAGTTCCTCGTA                          
JMSF052O09+           GGGCGGCGCCGCCGACGTAGGGCAGTTCCTCGTAGCCGAAGGCCTCAACGACGTCGTTGA
                      ____________________________________________________________
consensus             GGGCGGCGCCGCCGACGTAGGGCAGTTCCTCGTAGCCGAAGGCCTCAACGACGTCGTTGA
 
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JMSF052O09+           AGTCAGAGGCCGAGTTGACTGGAAAGCCTTTGAAGAGAATAGCCCCAGATTGATGAAGAA
                      ____________________________________________________________
consensus             AGTCAGAGGCCGAGTTGACTGGAAAGCCTTTGAAGAGAATAGCCCCAGATTGATGAAGAA
 
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JMSF052O09+           GAGCGTCCAGCCATGGCTTTTGCTCCTTAATCGCAACCGGGAAGCTTGTAGTAGACGACA
                      ____________________________________________________________
consensus             GAGCGTCCAGCCATGGCTTTTGCTCCTTAATCGCAACCGGGAAGCTTGTAGTAGACGACA
 
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JMSF052O09+           CGTTTGGGTTCGGCGACAACACTGCCGGAAAGGGTTTTCCGTCAAATCGCTTCTTTTGCG
                      ____________________________________________________________
consensus             CGTTTGGGTTCGGCGACAACACTGCCGGAAAGGGTTTTCCGTCAAATCGCTTCTTTTGCG
 
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JMSF052O09+           GGATTTTATTGGGCGAAGAAACTTTCCGGCATTTTGAACCTAATAATCTGTATTTTCCTT
                      ____________________________________________________________
consensus             GGATTTTATTGGGCGAAGAAACTTTCCGGCATTTTGAACCTAATAATCTGTATTTTCCTT
 
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JMSF052O09+           CTCTAGAATAGAAGAATTGAAGAAGATGATCGGAGTCTAAATTTATGAATATAGGCCATC
                      ____________________________________________________________
consensus             CTCTAGAATAGAAGAATTGAAGAAGATGATCGGAGTCTAAATTTATGAATATAGGCCATC