Contig 008108:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS007D04Sequence436008108 (4)ref|XP_009598257.1|9e-73PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMFS020C07Sequence626008108 (4)ref|XP_009598257.1|2e-69PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMSF003E18Sequence432008108 (4)ref|XP_006363350.1|6e-27PREDICTED: E3 UFM1-protein ligase 1 homolog [Solanum tuberosum]394005851 (2)ref|XP_009598257.1|2e-43PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]
JMSF052F17Sequence692008108 (4)ref|XP_009598257.1|6e-73PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]848005851 (2)ref|XP_009598257.1|6e-121PREDICTED: E3 UFM1-protein ligase 1 homolog [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS007D04+ CCCCTTGCAGCACCACGGACCATAGCATTCACCCGTGCA
JMFS020C07+ AGCATTCACCCGTGCA
JMSF052F17+ CAGCACCACGGACCATAGCATTCACCCGTGCA
                      ____________________________________________________________
consensus CCCCTTGCAGCACCACGGACCATAGCATTCACCCGTGCA
 
. : . : . : . : . : . :
JMFS007D04+ ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
JMFS020C07+ ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
JMSF052F17+ ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
                      ____________________________________________________________
consensus ACATATGCTGGTGTATACAACTGGCCACCTTCAAGCCTACCTTTTACCAGAGTCCCAAGT
 
. : . : . : . : . : . :
JMFS007D04+ CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
JMFS020C07+ CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
JMSF052F17+ CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
                      ____________________________________________________________
consensus CGAGGCTCAATAATGGACACTACTAGTTCCGAGCCAACTTGTAATTGCGCCGCTATTTCA
 
. : . : . : . : . : . :
JMFS007D04+ GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
JMFS020C07+ GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
JMSF052F17+ GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
                      ____________________________________________________________
consensus GCAATGGCAATTTGGCTGCACTCCTGCAGCCTTTCATTAATTTCCTCAGCAACAGTGTCC
 
. : . : . : . : . : . :
JMFS007D04+ CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
JMFS020C07+ CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
JMSF003E18+ ACATCAGTGATGAGTCACTCGAAACT
JMSF052F17+ CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
                      ____________________________________________________________
consensus CAATAAGAATTTGAGATTATTTCACCATTGATCAACATCAGTGATGAGTCACTCGAAACT
 
. : . : . : . : . : . :
JMFS007D04+ ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMFS020C07+ ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMSF003E18+ ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
JMSF052F17+ ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
                      ____________________________________________________________
consensus ACATGCTGTGATTGTTTCTCTACATGGAACAAGTCCATTCCGGTAGTGTCCGCTAAGTCT
 
. : . : . : . : . : . :
JMFS007D04+ ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMFS020C07+ ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMSF003E18+ ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
JMSF052F17+ ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
                      ____________________________________________________________
consensus ATCAACGAAACGCGCCCCAATCTCTTAATTTCTCCAGCTATTTCATTCCTCAAGTGTTCA
 
. : . : . : . : . : . :
JMFS007D04+ GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGA
JMFS020C07+ GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
JMSF003E18+ GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
JMSF052F17+ GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
                      ____________________________________________________________
consensus GGAGTGATGAACTCTTTGCCGGAAACGGTGTGGAGGAGGTCGAAGTCGAGGATTTGGAGC
 
. : . : . : . : . : . :
JMFS020C07+ TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
JMSF003E18+ TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
JMSF052F17+ TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
                      ____________________________________________________________
consensus TGCTGAAGCTTCTGAACCAATTCGACGACGTTGCGGTCGGATAAACGGACGGTGGATTTC
 
. : . : . : . : . : . :
JMFS020C07+ GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
JMSF003E18+ GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
JMSF052F17+ GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
                      ____________________________________________________________
consensus GCTTGTTGAGCGAACTCGAACTGCCTCTGCAATTCCAGAAGTTCTTCATCCATCTTCCTA
 
. : . : . : . : . : . :
JMFS020C07+ TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
JMSF003E18+ TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
JMSF052F17+ TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
                      ____________________________________________________________
consensus TTCCGAAATTCAGCGATTCAACTCAGTCGCGATGGAGAGGAACAAAAAGAAAAAGAGTTT
 
. : . : . : . : . : . :
JMFS020C07+ CGACTGAATG
JMSF003E18+ CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGC
JMSF052F17+ CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGCGATCTTAGACCGGGC
                      ____________________________________________________________
consensus CGACTGAATGAATACTATACTCCGATCAGAATGATCGGCTCAGGCGATCTTAGACCGGGC