Contig 008100:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF049P21Sequence607008100 (4)ref|XP_006338221.1|313PREDICTED: uncharacterized protein LOC102591158 [Solanum tuberosum]
JMFN005E04Sequence639008100 (4)ref|XP_006338221.1|337PREDICTED: uncharacterized protein LOC102591158 [Solanum tuberosum]
JMSF051G06Sequence627008100 (4)ref|XP_006338221.1|316PREDICTED: uncharacterized protein LOC102591158 [Solanum tuberosum]769008100 (4)ref|XP_006338221.1|318PREDICTED: uncharacterized protein LOC102591158 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF051G06- AGAATTTTATTATGTCCACCTCACAAAAC
                      ____________________________________________________________
consensus AGAATTTTATTATGTCCACCTCACAAAAC
 
. : . : . : . : . : . :
rJMSF051G06- TAGGAAAAAGATTCAGATTTCTTTTGGAACAAGCACCTTATCCTACATTGCTAAGCATAA
                      ____________________________________________________________
consensus TAGGAAAAAGATTCAGATTTCTTTTGGAACAAGCACCTTATCCTACATTGCTAAGCATAA
 
. : . : . : . : . : . :
rJMSF051G06- AAGGCGTAGTGGATTTCAGTGCCACTGCTATGCCATCGGATCATTCTGCGCAGTTTCAAA
                      ____________________________________________________________
consensus AAGGCGTAGTGGATTTCAGTGCCACTGCTATGCCATCGGATCATTCTGCGCAGTTTCAAA
 
. : . : . : . : . : . :
rJMSF051G06- CTTGTCAAAAAATGTATCTCGAATGTTGCACACAGGCATCTCGGGGTACTTGCTCAGAAG
JMFN005E04+ G
                      ____________________________________________________________
consensus CTTGTCAAAAAATGTATCTCGAATGTTGCACACAGGCATCTCGGGGTACTTGCTCAGAAG
 
. : . : . : . : . : . :
rJMSF051G06- TTTCAGCCCTTGGTCAATATCGAGGTCATGCATCAACACTTTATCCCCAATATCTAGATT
JMFN005E04+ TTTCAGCCCTTGGTCAATATCGAGGTCATGCATCAACACTTTATCCCCAATATCTAGATT
                      ____________________________________________________________
consensus TTTCAGCCCTTGGTCAATATCGAGGTCATGCATCAACACTTTATCCCCAATATCTAGATT
 
. : . : . : . : . : . :
rJMSF051G06- GCTCACGTCCACCTCAATCTTTTGAGGGATTTTCTCGGCAGGGCATAAAAACCTGAGACT
JMFN005E04+ GCTCACGTCCACCTCAATCTTTTGAGGGATTTTCTCGGCAGGGCATAAAAACCTGAGACT
JMFF049P21+ CGGCAGGGCATAAAAACCTGAGACT
JMSF051G06+ CGGCAGGGCATAAAAACCTGAGACT
                      ____________________________________________________________
consensus GCTCACGTCCACCTCAATCTTTTGAGGGATTTTCTCGGCAGGGCATAAAAACCTGAGACT
 
. : . : . : . : . : . :
rJMSF051G06- AGTCCTTGCCTTGTTTAGATGACCTCCTTTCTTGACACCAAGGCATACGTCTTCTCCTTT
JMFN005E04+ AGTCCTTGCCTTGTTTAGATGACCTCCTTTCTTGACACCAAGGCATACGTCTTCTCCTTT
JMFF049P21+ AGTCCTTGCCTTGTTTAGATGACCTCCTTTCTTGACACCAAGGCATACGTCTTCTCCTTT
JMSF051G06+ AGTCCTTGCCTTGTTTAGATGACCTCCTTTCTTGACACCAAGGCATACGTCTTCTCCTTT
                      ____________________________________________________________
consensus AGTCCTTGCCTTGTTTAGATGACCTCCTTTCTTGACACCAAGGCATACGTCTTCTCCTTT
 
. : . : . : . : . : . :
rJMSF051G06- CAAAACAATAGGGATATCCACCTTCAATTTCGATCCATCTTCAGCCCATACAAACACCAA
JMFN005E04+ CAAAACAATAGGGATATCCACCTTCAATTTCGATCCATCTTCAGCCCATACAAACACCAA
JMFF049P21+ CAAAACAATAGGGATATCCACCTTCAATTTCGATCCATCTTCAGCCCATACAAACACCAA
JMSF051G06+ CAAAACAATAGGGATATCCACCTTCAATTTCGATCCATCTTCAGCCCATACAAACACCAA
                      ____________________________________________________________
consensus CAAAACAATAGGGATATCCACCTTCAATTTCGATCCATCTTCAGCCCATACAAACACCAA
 
. : . : . : . : . : . :
rJMSF051G06- ATTCAATATCTTCCCAGTCTCCTTATCTCTGTGAATCTTGATGGGGAGTACTTTCCCGGA
JMFN005E04+ ATTCAATATCTTCCCAGTCTCCTTATCTCTGTGAATCTTGATGGGGAGTACTTTCCCGGA
JMFF049P21+ ATTCAATATCTTCCCAGTCTCCTTATCTCTGTGAATCTTGATGGGGAGTACTTTCCCGGA
JMSF051G06+ ATTCAATATCTTCCCAGTCTCCTTATCTCTGTGAATCTTGATGGGGAGTACTTTCCCGGA
                      ____________________________________________________________
consensus ATTCAATATCTTCCCAGTCTCCTTATCTCTGTGAATCTTGATGGGGAGTACTTTCCCGGA
 
. : . : . : . : . : . :
rJMSF051G06- TTCAAGTAAAGTTGATGAGCCCGACCCGGCCCGGATCTGGAACGGAAATGTCGTGGAGCA
JMFN005E04+ TTCAAGTAAAGTTGATGAGCCCGACCCGGCCCGGATCTGGAACGGAAATGTCGTGGAGCA
JMFF049P21+ TTCAAGTAAAGTTGATGAGCCCGACCCGGCCCGGATCTGGAACGGAAATGTCGTGGAGCA
JMSF051G06+ TTCAAGTAAAGTTGATGAGCCCGACCCGGCCCGGATCTGGAACGGAAATGTCGTGGAGCA
                      ____________________________________________________________
consensus TTCAAGTAAAGTTGATGAGCCCGACCCGGCCCGGATCTGGAACGGAAATGTCGTGGAGCA
 
. : . : . : . : . : . :
rJMSF051G06- GAAGAAAGGGGAATCTACGGACTTGAGAATGGTCTTAATCTGCTTTCTCTCGGTCGTGAG
JMFN005E04+ GAAGAAAGGGGAATCTACGGACTTGAGAATGGTCTTAATCTGCTTTCTCTCGGTCGTGAG
JMFF049P21+ GAAGAAAGGGGAATCTACGGACTTGAGAATGGTCTTAATCTGCTTTCTCTCGGTCGTGAG
JMSF051G06+ GAAGAAAGGGGAATCTACGGACTTGAGAATGGTCTTAATCTGCTTTCTCTCGGTCGTGAG
                      ____________________________________________________________
consensus GAAGAAAGGGGAATCTACGGACTTGAGAATGGTCTTAATCTGCTTTCTCTCGGTCGTGAG
 
. : . : . : . : . : . :
rJMSF051G06- GAGGCGTTTCCGGGAGACGGAGGCCGTCGCGGCGATGGAAGTCGGATCGCTAGGGTTTGT
JMFN005E04+ GAGGCGTTTCCGGGAGACGGAGGCCGTCGCGGCGATGGAAGTCGGATCGCTAGGGTTTGT
JMFF049P21+ GAGGCGTTTCCGGGAGACGGAGGCCGTCGCGGCGATGGAAGTCGGATCGCTAGGGTTTGT
JMSF051G06+ GAGGCGTTTCCGGGAGACGGAGGCCGTCGCGGCGATGGAAGTCGGATCGCTAGGGTTTGT
                      ____________________________________________________________
consensus GAGGCGTTTCCGGGAGACGGAGGCCGTCGCGGCGATGGAAGTCGGATCGCTAGGGTTTGT
 
. : . : . : . : . : . :
rJMSF051G06- TTGGACATAGTTCTGCGAGAAGACGACGGCGGGGATACGGCCCTGGGCTCGATCCTTCGC
JMFN005E04+ TTGGACATAGTTCTGCGAGAAGACGACGGCGGGGATACGGCCCTGGGCTCGATCCTTCGC
JMFF049P21+ TTGGACATAGTTCTGCGAGAAGACGACGGCGGGGATACGGCCCTGGGCTCGATCCTTCGC
JMSF051G06+ TTGGACATAGTTCTGCGAGAAGACGACGGCGGGGATACGGCCCTGGGCTCGATCCTTCGC
                      ____________________________________________________________
consensus TTGGACATAGTTCTGCGAGAAGACGACGGCGGGGATACGGCCCTGGGCTCGATCCTTCGC
 
. : . : . : . : . : . :
rJMSF051G06- AGAAACTCTGNTCCCAGTTA
JMFN005E04+ AGAAACTCTGTTCCCAGTTACCTCCCTTGGGATAGCCTGAATTGTGAAATACGATCGTCG
JMFF049P21+ AGAAACTCTGTTCCCAGTTACCTCCCTTGGGATAGCCTGAATTGTGAAATACGATCGTCG
JMSF051G06+ AGAAACTCTGTTCCCAGTTACCTCCCTTGGGATAGCCTGAATTGTGAAATACGATCGTCG
                      ____________________________________________________________
consensus AGAAACTCTGTTCCCAGTTACCTCCCTTGGGATAGCCTGAATTGTGAAATACGATCGTCG
 
. : . : . : . : . : . :
JMFN005E04+ GCTCGGCGCCTCCGTCGCGCTTCTTAAGCCGGTGCCGG
JMFF049P21+ GCTCGGCGCCTCCGTCGCGCTTCTTAAGCCGGTGCCGGCAGCCGCCACCGTGCGCCACCA
JMSF051G06+ GCTCGGCGCCTCCGTCGCGCTTCTTAAGCCGGTGCCGGCAGCCGCCACCGTGCGCCACCA
                      ____________________________________________________________
consensus GCTCGGCGCCTCCGTCGCGCTTCTTAAGCCGGTGCCGGCAGCCGCCACCGTGCGCCACCA
 
. : . : . : . : . : . :
JMFF049P21+ CTTCGTCATGTCTTGACCTTTGTCCGGAGAAATTCAAAGCT
JMSF051G06+ CTTCGTCATGTCTTGACCTTTGTCCGGAGAAATTCAAAGCTGGCTCAGTGAAAGGGTTCC
                      ____________________________________________________________
consensus CTTCGTCATGTCTTGACCTTTGTCCGGAGAAATTCAAAGCTGGCTCAGTGAAAGGGTTCC