Contig 008082:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF022P14Sequence600008082 (3)gb|EPS63462.1|1e-12hypothetical protein M569_11322, partial [Genlisea aurea]704004402 (4)ref|XP_009781292.1|1e-27PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris]
JMSF049I14Sequence621008082 (3)ref|XP_002280228.3|6e-11PREDICTED: beta-galactosidase 17 [Vitis vinifera]751004402 (4)ref|XP_009781292.1|1e-27PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris]
JMSF049L15Sequence555008082 (3)730004402 (4)ref|XP_009781292.1|1e-27PREDICTED: zinc finger protein JACKDAW-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF022P14+                                            TCTGGAAACCCTTGTTGCAGATTTCGC
JMSF049I14+                                         CCCTCTGGAAACCCTTGTTGCAGATTTCGC
                      ____________________________________________________________
consensus                                           CCCTCTGGAAACCCTTGTTGCAGATTTCGC
 
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JMSF022P14+           AGATGAATCTGTTGGTCGCCATAAGCGTCTTCGGCGACAGCGCAATAACTTCCGCATCCG
JMSF049I14+           AGATGAATCTGTTGGTCGCCATAAGCGTCTTCGGCGACAGCGCAATAACTTCCGCATCCG
                      ____________________________________________________________
consensus             AGATGAATCTGTTGGTCGCCATAAGCGTCTTCGGCGACAGCGCAATAACTTCCGCATCCG
 
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JMSF022P14+           GATCTGGTGTACCTGGGAGATTTCTCTTCTTCTTGGAGGAAGGATTGGGCTTAGGGTTAG
JMSF049L15+              CTGG---------GAGATTTCTCTTCTTCTTGGAGGAAGGATTGGGCTTAGGGTTAG
JMSF049I14+           GATCTGG---------GAGATTTCTCTTCTTCTTGGAGGAAGGATTGGGCTTAGGGTTAG
                      ____________________________________________________________
consensus             GATCTGG---------GAGATTTCTCTTCTTCTTGGAGGAAGGATTGGGCTTAGGGTTAG
 
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JMSF022P14+           GGTTTGGATCTTGAGGAGGAGGAGGGATGGGTTTGAGGGAAGAAGGGATTGAGAACACAT
JMSF049L15+           GGTTTGGATCTTGAGGAGGAGGAGGGATGGGTTTGAGGGAAGAAGGGATTGAGAACACAT
JMSF049I14+           GGTTTGGATCTTGAGGAGGAGGAGGGATGGGTTTGAGGGAAGAAGGGATTGAGAACACAT
                      ____________________________________________________________
consensus             GGTTTGGATCTTGAGGAGGAGGAGGGATGGGTTTGAGGGAAGAAGGGATTGAGAACACAT
 
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JMSF022P14+           CTCCAGACATCATTTCTTGATGAGCTTAAAGGTTAAAGCTTTTCTGTTTCTGGTAAAACA
JMSF049L15+           CTCCAGACATCATTTCTTGATGAGCTTAAAGGTTAAAGCTTTTCTGTTTCTGGTAAAACA
JMSF049I14+           CTCCAGACATCATTTCTTGATGAGCTTAAAGGTTAAAGCTTTTCTGTTTCTGGTAAAACA
                      ____________________________________________________________
consensus             CTCCAGACATCATTTCTTGATGAGCTTAAAGGTTAAAGCTTTTCTGTTTCTGGTAAAACA
 
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JMSF022P14+           CTGGGTTTTGCGCAGAGAGAGGGAGCTAGAAAACAAAGATGGGAAGAAAAGGGAGTGTGA
JMSF049L15+           CTGGGTTTTGCGCAGAGAGAGGGAGCTAGAAAACAAAGATGGGAAGAAAAGGGAGTGTGA
JMSF049I14+           CTGGGTTTTGCGCAGAGAGAGGGAGCTAGAAAACAAAGATGGGAAGAAAAGGGAGTGTGA
                      ____________________________________________________________
consensus             CTGGGTTTTGCGCAGAGAGAGGGAGCTAGAAAACAAAGATGGGAAGAAAAGGGAGTGTGA
 
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JMSF022P14+           TTTATCCAAACAGAAGGAGATAAAAAATCTTGGGTGTTATTCAAAATCTGAGAAGAAGTT
JMSF049L15+           TTTATCCAAACAGAAGGAGATAAAAAATCTTGGGTGTTATTCAAAATCTGAGAAGAAGTT
JMSF049I14+           TTTATCCANACAGAAGGAGATAAAAAATCTTGGGTGTTATTCAAAATCTGAGAAGAAGTT
                      ____________________________________________________________
consensus             TTTATCCAAACAGAAGGAGATAAAAAATCTTGGGTGTTATTCAAAATCTGAGAAGAAGTT
 
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JMSF022P14+           TCAGATTGTGGCGAAAGAAGACGACGAGGAAGCCCAGAAACCTCAGTACTAATTATAAGC
JMSF049L15+           TCAGATTGTGGCGAAAGAAGACGACGAGGAAGCCCAGAAACCTCAGTACTAATTATAAGC
JMSF049I14+           TCAGATTGTGGCGAAAGAAGACGACGAGGAAGCCCAGAAACCTCAGTACTAATTATAAGC
                      ____________________________________________________________
consensus             TCAGATTGTGGCGAAAGAAGACGACGAGGAAGCCCAGAAACCTCAGTACTAATTATAAGC
 
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JMSF022P14+           AGAAGCTTACANGATTACACACACAAAAAACACCAACTCAGGAAGCTGCTGCTGGTGTGT
JMSF049L15+           AGAAGCTTACAAGATTACACACACAAAAAACACCAACTCAGGAAGCTGCTGCTGGTGTGT
JMSF049I14+           AGAAGCTTACANGATTACACACACAAAAAACACCAACTCAGGAAGCTGCTGCTGGTGTGT
                      ____________________________________________________________
consensus             AGAAGCTTACAAGATTACACACACAAAAAACACCAACTCAGGAAGCTGCTGCTGGTGTGT
 
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JMSF022P14+           GTGTTTGAATCCTCGCTACAAACACACCANGAAAGAACANGAGAGAGAGAGAGAGATTTG
JMSF049L15+           GTGTTTGAATCCTCGCTACANACACACCANGAAAGAACANGAGAGAGAGAGAGAGATTTG
JMSF049I14+           GTGTTTGAATCCTCGCTACAAACACACCANGAAAGAACANGAGAGAGAGAGAGAGATTTG
                      ____________________________________________________________
consensus             GTGTTTGAATCCTCGCTACAAACACACCANGAAAGAACANGAGAGAGAGAGAGAGATTTG
 
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JMSF022P14+           AGAAGGAAGAGAGAGAGAGAGAGAGGTGTTTC                            
JMSF049L15+           AGAAGGAAGAGAGAGAGAGAGAGAGGTGTTTCAGTGTTTGTTTGATTTC           
JMSF049I14+           AGAAGGAAGAGAGAGAGAGAGAGAGGTGTTTCAGTGTTTGTTTGATTTCAATAGAAAACC
                      ____________________________________________________________
consensus             AGAAGGAAGAGAGAGAGAGAGAGAGGTGTTTCAGTGTTTGTTTGATTTCAATAGAAAACC