Contig 008077:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF048O20+                                           CTCCACAAGTGTAGTCTTTAAAATAGTA
                      ____________________________________________________________
consensus                                             CTCCACAAGTGTAGTCTTTAAAATAGTA
 
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JMSF048O20+           TGCCTATCAAGAGTGCTTCTAATTTCATGAGTAAGCATTCTAACATGTCTACCTGTCTCT
                      ____________________________________________________________
consensus             TGCCTATCAAGAGTGCTTCTAATTTCATGAGTAAGCATTCTAACATGTCTACCTGTCTCT
 
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JMFS103D08+                                          CAAGTTCTGCAGCCTTGTTTTTTAAGAAC
JMSF048O20+           TCTTGTGTGCGGATAAGGCCCATTTCTCGATCAAGTTCTGCAGCCTTGTTTTTTAAGAAC
                      ____________________________________________________________
consensus             TCTTGTGTGCGGATAAGGCCCATTTCTCGATCAAGTTCTGCAGCCTTGTTTTTTAAGAAC
 
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JMFS031G04+                                AATAAATCAGGTATAATGTGCACTAGCATGAGCGCAGTC
JMFS103D08+           AGTTCCCTAGTTTTGACACTTAATAAATCAGGTATAATGTGCACTAGCATGAGCGCAGTC
JMSF048O20+           AGTTCCCTAGTTTTGACACTTAATAAATCAGGTATAATGTGCACTAGCATGAGCGCAGTC
                      ____________________________________________________________
consensus             AGTTCCCTAGTTTTGACACTTAATAAATCAGGTATAATGTGCACTAGCATGAGCGCAGTC
 
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JMFS031G04+           ACACATGAAACTAATGCAGTCAATAGCTTTGCGGTTGTCATGACTATAGCTACTGTTCTT
JMFS103D08+           ACACATGAAACTAATGCAGTCAATAGCTTTGCGGTTGTCATGACTATAGCTACTGTTCTT
JMSF048O20+           ACACATGAAACTAATGCAGTCAATAGCTTTGCGGTTGTCATGACTATAGCTACTGTTCTT
                      ____________________________________________________________
consensus             ACACATGAAACTAATGCAGTCAATAGCTTTGCGGTTGTCATGACTATAGCTACTGTTCTT
 
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JMFS031G04+           GTATGCATGCCAAATGTCCATAAGTTTATAAAGTGTGTAGCTCCACAAAGAATAATAAAT
JMFS103D08+           GTATGCATGCCAAATGTCCATAAGTTTATAAAGTGTGTAGCTCCACAAAGAATAATAAAT
JMSF048O20+           GTATGCATGCCAAATGTCCATAAGTTTATAAAGTGTGTAGCTCCACAAAGAATAATAAAT
                      ____________________________________________________________
consensus             GTATGCATGCCAAATGTCCATAAGTTTATAAAGTGTGTAGCTCCACAAAGAATAATAAAT
 
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JMFS031G04+           GCACCGAACTGCACAAGCACCCATCTATAAGGAAAAACTGCAGATTTCTTAACAAAGTAT
JMFS103D08+           GCACCGAACTGCACAAGCACCCATCTATAAGGAAAAACTGCAGATTTCTTAACAAAGTAT
JMSF048O20+           GCACCGAACTGCACAAGCACCCATATATAAGGAAAAACTGCAGATTTCTTAACAAAGTAT
                      ____________________________________________________________
consensus             GCACCGAACTGCACAAGCACCCATCTATAAGGAAAAACTGCAGATTTCTTAACAAAGTAT
 
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JMFS031G04+           ATCAACTCAACTGGGATGGAAAAATAAGCAAGTGCGATGAAGAAATCTGATATATACTGA
JMFS103D08+           ATCAACTCAACTGGGATGGAAAAATAAGCAAGTGCGATGAAGAAATCTGATATATACTGA
JMSF048O20+           ATCAACTCAACTGGGATGGAAAAATAAGCAAGTGCGATGAAGAAATCTGATATATACTGA
                      ____________________________________________________________
consensus             ATCAACTCAACTGGGATGGAAAAATAAGCAAGTGCGATGAAGAAATCTGATATATACTGA
 
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JMFS031G04+           TACTTCATCAGTAACTCGTCGGCAGGCCATTGCGGGTCAATGCAATTACAAGACTCCATT
JMFS103D08+           TACTTCATCAGTAACTCGTCGGCAGGCCATTGCGGGTCAATGCAATTACAAGACTCCATT
JMSF048O20+           TACTTCATCAGTAACTCGTCGGCAGGCCATTGCGGGTCAATGCAATTACAAGACTCCATT
                      ____________________________________________________________
consensus             TACTTCATCAGTAACTCGTCGGCAGGCCATTGCGGGTCAATGCAATTACAAGACTCCATT
 
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JMFS031G04+           ATAAACTTTCAATCTCAGCTGCAACACTTTCTTATGAACACACCATACTTCTCTGAGGAT
JMFS103D08+           ATAAACTTTCAATCTCAGCTGCAACACTTTCTTATGAACACACCATACTTCTCTGAGGAT
JMSF048O20+           ATAAACTTTCAATCTCAGCTGCAACACTTTCTTATGAACACACCATACTTCTCTGAGGAT
                      ____________________________________________________________
consensus             ATAAACTTTCAATCTCAGCTGCAACACTTTCTTATGAACACACCATACTTCTCTGAGGAT
 
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JMFS031G04+           CCGTCAAAAGCTTTCAACTTTAGCAGAAGCAGTTTCCATTGCCTTGACTTTGTGAGGAAT
JMFS103D08+           CCGTCAAAAGCTTTCAACTTTAGCAGAAGCAGTTTCCATTGCCTTGACTTTGTGAGGAAT
JMSF048O20+           CCGTCAAAAGCTTTCAACTTTAGCAGAAGCAGTTTCCATTGCCTTGACTTTGTGAGGAAT
                      ____________________________________________________________
consensus             CCGTCAAAAGCTTTCAACTTTAGCAGAAGCAGTTTCCATTGCCTTGACTTTGTGAGGAAT
 
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JMFS031G04+           TTGGAGCTCAACAACACAGCTTTTTTTTACTCGGTTCA                      
JMFS103D08+           TTGGAGCTCAACAACACAGCTTTTTTTTACTCGGTTCAGGCAAGCTTTA           
JMSF048O20+           TTGGAGCTCAACAACACAGCTTTTTTTTACTCGGTTCAGGCAAGCTTTAGACAAAACAGC
                      ____________________________________________________________
consensus             TTGGAGCTCAACAACACAGCTTTTTTTTACTCGGTTCAGGCAAGCTTTAGACAAAACAGC