Contig 008061:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-                                    ATCCTAATTTAAAGCGTAAAGATGAAAACTTGCT
                      ____________________________________________________________
consensus                                       ATCCTAATTTAAAGCGTAAAGATGAAAACTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          GGTAGGGTGTGTAAGGATTCCTGTGATGGTTGTTTCCTTTGAGAGCTATGTCTTCATACA
                      ____________________________________________________________
consensus             GGTAGGGTGTGTAAGGATTCCTGTGATGGTTGTTTCCTTTGAGAGCTATGTCTTCATACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          CCTTTAATAACAAGTTTGATCAATTTCATACTACTTCTAAATGTGTTGATTGTAGCTTTA
JMSF046O21+                                                              GTAGCNTTA
                      ____________________________________________________________
consensus             CCTTTAATAACAAGTTTGATCAATTTCATACTACTTCTAAATGTGTTGATTGTAGCTTTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          ATGCCTCCAAATATTTTTCCTAAAATAAAATATAAGTTAGCAAAGTTAATTGTAATGCTT
JMSF046O21+           ATGCCNCCAAATNTTTTTCCTAAAATNAAATNTAAGTTAGCNAAGTTAATTGTAATGCTT
                      ____________________________________________________________
consensus             ATGCCTCCAAATATTTTTCCTAAAATAAAATATAAGTTAGCAAAGTTAATTGTAATGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          TTATGGATTTAAAAAAAAAAAAANGAAAGAATTANCTTANAGCTTAATTANAAANCCNCT
JMSF046O21+           TTATGGNTTTAAAAAAAAAAAAATGAAAGAATTAACTTAGAGCTTAATTAGAAAACCTCT
                      ____________________________________________________________
consensus             TTATGGATTTAAAAAAAAAAAAATGAAAGAATTAACTTAGAGCTTAATTAGAAAACCTCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          AANAGNCNGGGAAAANGTATTTTTGCAGNGAATNCAANCCNCAGTAAAANCCAATATGAA
JMSF046O21+           AATAGTCTGGGAAAATGTATTTTTGCAGTGAATACAAACCTCAGTAAAAACCAATATGAA
                      ____________________________________________________________
consensus             AATAGTCTGGGAAAATGTATTTTTGCAGTGAATACAAACCTCAGTAAAAACCAATATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          AANCGGTAAATTTAANCTTTANATTTCANAAATTAGGGCANCTTTATAGACNTAAAATTA
JMSF046O21+           AATCGGTAAATTTAAGCTTTAGATTTCATAAATTAGGGCAGCTTTATAGACATAAAATTA
                      ____________________________________________________________
consensus             AATCGGTAAATTTAAGCTTTAGATTTCATAAATTAGGGCAGCTTTATAGACATAAAATTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          GGGGAAAAATNCNCGAAAGATTTNCNTTGCAAANGANACAAAATCGAANCATTCCAGAAT
JMSF046O21+           GGGGAAAAATACTCGAAAGATTTACATTGCAAATGAGACAAAATCGAAACATTCCAGAAT
                      ____________________________________________________________
consensus             GGGGAAAAATACTCGAAAGATTTACATTGCAAATGAGACAAAATCGAAACATTCCAGAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          CAAANCCGAAACAACTGGGNGTAAGCCTTTTATTTTTTGCANAACCAAATCGTAATTTGT
JMSF046O21+           CAAAACCGAAACAACTGGGTGTAAGCCTTTTATTTTTTGCAGAACCAAATCGTAATTTGT
                      ____________________________________________________________
consensus             CAAAACCGAAACAACTGGGTGTAAGCCTTTTATTTTTTGCAGAACCAAATCGTAATTTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          AAGCTAAGCATTTCCAGAAATTATGTAAGATAATACTACNTCTAANCAAAAATTAGGTAG
JMSF046O21+           AAGCTAAGCATTTCCAGAAATTATGTAAGATAATACTACATCTAAACAAAAATTAGGTAG
                      ____________________________________________________________
consensus             AAGCTAAGCATTTCCAGAAATTATGTAAGATAATACTACATCTAAACAAAAATTAGGTAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF046O21-          GTTAATTGTAAA                                                
JMSF046O21+           GTTAATTGTAAAAATTTGACACAAAAAAAGAGAAAGGAATACATATCTGAGTGTTAGCCT
                      ____________________________________________________________
consensus             GTTAATTGTAAAAATTTGACACAAAAAAAGAGAAAGGAATACATATCTGAGTGTTAGCCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF046O21+           TCAATCCTTCTGTTTCGATGCTTAGTAGGGTTTCCATCAGATCGAAGAGAGATAAATCAG
                      ____________________________________________________________
consensus             TCAATCCTTCTGTTTCGATGCTTAGTAGGGTTTCCATCAGATCGAAGAGAGATAAATCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF046O21+           AGATGAGAAATGAAGAACGGGAAGTTAAGAATGAGAAGCAGAGATGTTCTAAGGCTTTCC
                      ____________________________________________________________
consensus             AGATGAGAAATGAAGAACGGGAAGTTAAGAATGAGAAGCAGAGATGTTCTAAGGCTTTCC