clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF007O12 | Sequence | 628 | 008049 (8) | ref|XP_009605553.1| | 4e-75 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] | 763 | 008049 (8) | ref|XP_009605553.1| | 3e-104 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
JMFF016C08 | Sequence | 629 | 008049 (8) | ref|XP_009605553.1| | 4e-75 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] | 761 | 008049 (8) | ref|XP_009605553.1| | 3e-104 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
JMFF046J18 | Sequence | 457 | 008049 (8) | ref|XP_006355452.1| | 4e-39 | PREDICTED: peroxisome biogenesis protein 19-1-like [Solanum tuberosum] | 428 | 008049 (8) | ref|XP_011070126.1| | 2e-48 | PREDICTED: peroxisome biogenesis protein 19-2-like [Sesamum indicum] |
JMSF045K17 | Sequence | 706 | 008049 (8) | ref|XP_009605553.1| | 2e-71 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] | 779 | 008049 (8) | ref|XP_009605553.1| | 3e-108 | PREDICTED: peroxisome biogenesis protein 19-1-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF046J18- GGCCAAAAATGTCATTTTC
____________________________________________________________
consensus GGCCAAAAATGTCATTTTC
. : . : . : . : . : . :
rJMFF046J18- CCATTAAAATATAATAATGATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
rJMSF045K17- GATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
____________________________________________________________
consensus CCATTAAAATATAATAATGATCCATCAACTAAAACCAATTCGAAATAAACCAGGTTTCTC
. : . : . : . : . : . :
rJMFF046J18- ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
rJMSF045K17- ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
____________________________________________________________
consensus ACGAACCGTGGCTCAGAAAACATATAAATATAGGAAAACATGAAGCCCAAATGGCAGAAA
. : . : . : . : . : . :
rJMFF046J18- GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
rJMSF045K17- GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
____________________________________________________________
consensus GGAAGACCTTTGCAAGTATGATCACATAATACAGCAATTTTGCTGAGACTCGAGCATCTC
. : . : . : . : . : . :
rJMFF046J18- TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
rJMFF007O12- ATATC
rJMFF016C08- ATATC
rJMSF045K17- TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
____________________________________________________________
consensus TGGGGTTATTTGACCGAGACTTGACAAATCAAAGTCTGGGGCAAGCTCGCTGACAATATC
. : . : . : . : . : . :
rJMFF046J18- ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMFF007O12- ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMFF016C08- ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
rJMSF045K17- ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
____________________________________________________________
consensus ATTAGGCGGTTGGCCACACTCTTGCATTTTCTGCATAAGCTCAACAATCTTGTTGAAGTT
. : . : . : . : . : . :
rJMFF046J18- GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMFF007O12- GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMFF016C08- GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
rJMSF045K17- GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMFF016C08+ GCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMFF007O12+ CTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
JMSF045K17+ CATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
____________________________________________________________
consensus GGCTGGCTCCGTTTCATAAACTCTAGTTAGCTCTTTTATGAGTTCGTACTGGTGGTTGTA
. : . : . : . : . : . :
rJMFF046J18- ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCAT
rJMFF007O12- ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
rJMFF016C08- ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
rJMSF045K17- ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMFF016C08+ ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMFF007O12+ ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
JMSF045K17+ ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
____________________________________________________________
consensus ACGGTTATACTCCTCATTGGTTAGTTTAGCTTTATTTTCTTCTAACCATTTAGGATACCG
. : . : . : . : . : . :
rJMFF007O12- TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
rJMFF016C08- TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
rJMSF045K17- TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMFF016C08+ TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMFF046J18+ AGCTGCTGCATCAT
JMFF007O12+ TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
JMSF045K17+ TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
____________________________________________________________
consensus TTCTTCAATTTCTTTCATAGGCTCGTGAAGGATTTCTTTTGATAAAAGCTGCTGCATCAT
. : . : . : . : . : . :
rJMFF007O12- GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
rJMFF016C08- GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
rJMSF045K17- GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF016C08+ GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF046J18+ GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMFF007O12+ GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
JMSF045K17+ GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
____________________________________________________________
consensus GGTCTCTACTAGGGATTCCATGTCCTGAGACCCAGCAAGATCCTCAAACTGCTTGGCCCA
. : . : . : . : . : . :
rJMFF007O12- TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
rJMFF016C08- TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
rJMSF045K17- TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF016C08+ TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF046J18+ TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMFF007O12+ TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
JMSF045K17+ TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
____________________________________________________________
consensus TTCCTCTATCAATGCATCATTCCCAAAATTCTGAGCACCAGGAAACTCCAAGCCATTCAT
. : . : . : . : . : . :
rJMFF007O12- TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
rJMFF016C08- TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
rJMSF045K17- TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF016C08+ TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF046J18+ TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMFF007O12+ TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
JMSF045K17+ TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
____________________________________________________________
consensus TGATTCTAACCCCTTCACAGCCTCCCTAGTCTGCTCTCTAAGCTTACCAAGAGCCTCAAA
. : . : . : . : . : . :
rJMFF007O12- AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
rJMFF016C08- AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
rJMSF045K17- AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF016C08+ AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF046J18+ AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMFF007O12+ AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
JMSF045K17+ AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
____________________________________________________________
consensus AGCATGTGAGTCCTTAGCCTCCTTTGAAGCCTTTTTTTGCTTACCTATTTTCTTAGCCCT
. : . : . : . : . : . :
rJMFF007O12- CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCA
rJMFF016C08- CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCA
rJMSF045K17- CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCC
JMFF016C08+ CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMFF046J18+ CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMFF007O12+ CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
JMSF045K17+ CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
____________________________________________________________
consensus CAAATCTGGCAATCCCATCCCTAGCCCTTGAACCTCACCAGGCATAGAACTCCCCTTCTC
. : . : . : . : . : . :
JMFF016C08+ TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMFF046J18+ TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMFF007O12+ TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
JMSF045K17+ TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
____________________________________________________________
consensus TTCTCCATCTTTTCTTCTTTGTGAAGAAGCAGTGAAATTGAGGTTCTGGAAATCATCTAA
. : . : . : . : . : . :
JMFF016C08+ AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMFF046J18+ AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMFF007O12+ AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
JMSF045K17+ AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
____________________________________________________________
consensus AGCGCTATCAAGTAGTTGGTCTAAATCATCGGAGTGGTCGGTAGCCATGGATTTTCCCAA
. : . : . : . : . : . :
JMFF016C08+ ATTTTCTCTCAATCGATATGAAG
JMFF046J18+ ATTTTCTCTCAATCGATATGAAG
JMFF007O12+ ATTTTCTCTCAATCGATATGAAG
JMSF045K17+ ATTTTCTCTCAATCGATATGAAGTCTATACAACTCTTTTCCACGGTAAATATCTTTAAAA
____________________________________________________________
consensus ATTTTCTCTCAATCGATATGAAGTCTATACAACTCTTTTCCACGGTAAATATCTTTAAAA
. : . : . : . : . : . :
JMSF045K17+ ATCTAATCTTTTTGGTGTCTTTTAGACTAAGGAATGAATGGACATTGAAATCTTAAAACC
____________________________________________________________
consensus ATCTAATCTTTTTGGTGTCTTTTAGACTAAGGAATGAATGGACATTGAAATCTTAAAACC