Contig 008026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017A12Sequence519008026 (2)ref|XP_006362531.1|222PREDICTED: NAC domain-containing protein 8-like [Solanum tuberosum]775009674 (2)emb|CDP00573.1|9e-37unnamed protein product [Coffea canephora]
JMSF042E22Sequence796008026 (2)ref|XP_009614315.1|9e-92PREDICTED: NAC domain-containing protein 8 isoform X2 [Nicotiana tomentosiformi818009674 (2)emb|CDP00573.1|2e-42unnamed protein product [Coffea canephora]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF042E22+ TGCGACCAGTCTTGTG
                      ____________________________________________________________
consensus TGCGACCAGTCTTGTG
 
. : . : . : . : . : . :
JMSF042E22+ CCAACGAACATCTCCAAAATTATCGCCATGTATCTTTCGACGCTTTCGAGTTCCAGTGTT
                      ____________________________________________________________
consensus CCAACGAACATCTCCAAAATTATCGCCATGTATCTTTCGACGCTTTCGAGTTCCAGTGTT
 
. : . : . : . : . : . :
JMFF017A12+ GATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTANCACCAGG
JMSF042E22+ ATAGGCTTTGATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTAACACCAGG
                      ____________________________________________________________
consensus ATAGGCTTTGATAGCTCTGTGAAAGAAATGGGAAACGGTGCCATCCTGCTTAACACCAGG
 
. : . : . : . : . : . :
JMFF017A12+ TAAATTTTGAGGATGCGTGTAGCATATCCCATCATNTTCATTAACTGTCGGAATGAACTC
JMSF042E22+ TAAATTTTGAGGATGCGTGTAGCATATCCCATCATCTTCATTAACTGTCGGAATGAACTC
                      ____________________________________________________________
consensus TAAATTTTGAGGATGCGTGTAGCATATCCCATCATCTTCATTAACTGTCGGAATGAACTC
 
. : . : . : . : . : . :
JMFF017A12+ ATNGATAAAAGGATGAGATTTCAAATCANTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
JMSF042E22+ ATCGATAAAAGGATGAGATTTCAAATCATTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
                      ____________________________________________________________
consensus ATCGATAAAAGGATGAGATTTCAAATCATTAAGACCAACTTTTGCAAGTAAGTGCCAGAT
 
. : . : . : . : . : . :
JMFF017A12+ AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
JMSF042E22+ AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
                      ____________________________________________________________
consensus AATCTCTTGATCAGACGGATCAAACTTCACACCTCTTGGCAATCCTGGCCATTCATGAGT
 
. : . : . : . : . : . :
JMFF017A12+ TACATCACTATTGTCAATAATATAGTGGCANCTGGGGCAAGTTCTTGTAGGATTGCTTTT
JMSF042E22+ TACATCACTATTGTCAATAATATAGTGGCAACTGGGGCAAGTTCTTGTAGGATTGCTTTT
                      ____________________________________________________________
consensus TACATCACTATTGTCAATAATATAGTGGCAACTGGGGCAAGTTCTTGTAGGATTGCTTTT
 
. : . : . : . : . : . :
JMFF017A12+ CCAGTTAATATTTCCTGGATCATNTGATGCACTTNTAATCTTTGTTGCGATTCTCTTACT
JMSF042E22+ CCAGTTAATATTTCCTGGATCATCTGATGCACTTCTAATCTTTGTTGCGATTCTCTTACT
                      ____________________________________________________________
consensus CCAGTTAATATTTCCTGGATCATCTGATGCACTTCTAATCTTTGTTGCGATTCTCTTACT
 
. : . : . : . : . : . :
JMFF017A12+ GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
JMSF042E22+ GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
                      ____________________________________________________________
consensus GTCAACCAACCATGAAGGTCTGGCCATGGGAAAGCTATAAAATAAGAAGAATCAAACACC
 
. : . : . : . : . : . :
JMFF017A12+ CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
JMSF042E22+ CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
                      ____________________________________________________________
consensus CTAATTTCTGTAATGCTGTGTTTCAAAACTCAAAAGTTGCCGTCTTGACCCGCCCTCTCG
 
. : . : . : . : . : . :
JMFF017A12+ CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGC
JMSF042E22+ CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGCATTTTGATTTTA
                      ____________________________________________________________
consensus CTCCCTTTACTTTCTCTGCAACTCTTCTCAACTCCCTTTACCAAATGCATTTTGATTTTA
 
. : . : . : . : . : . :
JMSF042E22+ GTTTGACTCCATCTTTATCCAGTAGTTCAATAATCGATACGCACACTGTCACCTCCAGGC
                      ____________________________________________________________
consensus GTTTGACTCCATCTTTATCCAGTAGTTCAATAATCGATACGCACACTGTCACCTCCAGGC
 
. : . : . : . : . : . :
JMSF042E22+ TCCACACCCAAACAAATTTAGTGAATAATATTCGATTCGTCTTTCTTGACCAATCTCACG
                      ____________________________________________________________
consensus TCCACACCCAAACAAATTTAGTGAATAATATTCGATTCGTCTTTCTTGACCAATCTCACG
 
. : . : . : . : . : . :
JMSF042E22+ TCCCACCTCCTCAGTCCACACACAATCACCTTCAAAGCGCGGAGACCAAACTACAAACCC
                      ____________________________________________________________
consensus TCCCACCTCCTCAGTCCACACACAATCACCTTCAAAGCGCGGAGACCAAACTACAAACCC