Contig 008010:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006I09Sequence630008010 (3)ref|XP_009609876.1|2e-66PREDICTED: glutaredoxin-C5, chloroplastic-like isoform X1 [Nicotiana tomentosif
JMSF041C11Sequence770008010 (3)ref|XP_009609876.1|2e-71PREDICTED: glutaredoxin-C5, chloroplastic-like isoform X1 [Nicotiana tomentosif503008010 (3)ref|XP_002267052.1|1e-71PREDICTED: monothiol glutaredoxin-S10 [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF041C11- AATATGGCAAATCATGAAGC
                      ____________________________________________________________
consensus AATATGGCAAATCATGAAGC
 
. : . : . : . : . : . :
rJMSF041C11- CAGATCCTAGGAGCAAATAATCAGTACACGACTATGAGAACAAGGATAGTTCAAACTTCA
JMSF041C11+ GAGCAAATAATCAGTACACGACTATGAGAACAAGGATAGTTCAAACTTCA
                      ____________________________________________________________
consensus CAGATCCTAGGAGCAAATAATCAGTACACGACTATGAGAACAAGGATAGTTCAAACTTCA
 
. : . : . : . : . : . :
rJMSF041C11- ACGCCACGCTCTTGACAGCTAGCTCTCCGTTTTCCTGGCGCTAGCTTCAGAGAGCAATGG
JMFN006I09+ AGCATTGG
JMSF041C11+ ACGCCACGCTCTTGACAGCTAGCTCTCCGTTTTCCTGGCGCTAGCTTCAGAGAGCAATGG
                      ____________________________________________________________
consensus ACGCCACGCTCTTGACAGCTAGCTCTCCGTTTTCCTGGCGCTAGCTTCAGAGAGCAATGG
 
. : . : . : . : . : . :
rJMSF041C11- TTCAAGTTCTCCTTTCCGGTATAGCTTAATGGTATCTGTACAACCTCCAATGTGTTTGCC
JMFN006I09+ TTCAAGTTCTCCTTTCCGGTATAGCTTAATGGTATCTGTACAACCTCCAATGTGTTTGCC
JMSF041C11+ TTCAAGTTCTCCTTTCCGGTATAGCTTAATGGTATCTGTACAACCTCCAATGTGTTTGCC
                      ____________________________________________________________
consensus TTCAAGTTCTCCTTTCCGGTATAGCTTAATGGTATCTGTACAACCTCCAATGTGTTTGCC
 
. : . : . : . : . : . :
rJMSF041C11- CCCAATAAACACATTCGGAACAGTATGCTGCCCTGTGAGCCTTTCCAGCACCTTCTGCAA
JMFN006I09+ CCCAATAAACACATTCGGAACAGTATGCTGCCCTGTGAGCCTTTCCAGCACCTTCTGCAA
JMSF041C11+ CCCAATAAACACATTCGGAACAGTATGCTGCCCTGTGAGCCTTTCCAGCACCTTCTGCAA
                      ____________________________________________________________
consensus CCCAATAAACACATTCGGAACAGTATGCTGCCCTGTGAGCCTTTCCAGCACCTTCTGCAA
 
. : . : . : . : . : . :
rJMSF041C11- TTGCGGTCCTTGGGGACCCATTTCATCCAATTCAATAACAAGCGGCTCCACTCCAAGTCT
JMFN006I09+ TTGCGGTCCTTGGGGACCCATTTCATCCAATTCAATAACAAGCGGCTCCACTCCAAGTCT
JMSF041C11+ TTGCGGTCCTTGGGGACCCATTTCATCCAATTCAATAACAAGCGGCTCCACTCCAAGTCT
                      ____________________________________________________________
consensus TTGCGGTCCTTGGGGACCCATTTCATCCAATTCAATAACAAGCGGCTCCACTCCAAGTCT
 
. : . : . : . : . : . :
rJMSF041C11- CTTGAACAAAACCTTCACTTCAGATGAGTACGAGCACCAAGTCTTGGAGTATACAACGAC
JMFN006I09+ CTTGAACAAAACCTTCACTTCAGATGAGTACGAGCACCAAGTCTTGGAGTATACAACGAC
JMSF041C11+ CTTGAACAAAACCTTCACTTCAGATGAGTACGAGCACCAAGTCTTGGAGTATACAACGAC
                      ____________________________________________________________
consensus CTTGAACAAAACCTTCACTTCAGATGAGTACGAGCACCAAGTCTTGGAGTATACAACGAC
 
. : . : . : . : . : . :
rJMSF041C11- GGGATTCTCGCCGACAGTCCTCTTGACGCTCTCCTCCATCCGGGACCCGAACGAGCCCGA
JMFN006I09+ GGGATTCTCGCCGACAGTCCTCTTGACGCTCTCCTCCATCCGGGACCCGAACGAGCCCGA
JMSF041C11+ GGGATTCTCGCCGACAGTCCTCTTGACGCTCTCCTCCATCCGGGACCCGAACGAGCCCGA
                      ____________________________________________________________
consensus GGGATTCTCGCCGACAGTCCTCTTGACGCTCTCCTCCATCCGGGACCCGAACGAGCCCGA
 
. : . : . : . : . : . :
rJMSF041C11- CACGGCTCGAATCTGGGTCGGGCACTGTTTTCTTGAGGAAAACTTGGGG
JMFN006I09+ CACGGCTCGAATCTGGGTCGGGCACTGTTTTCTTGAGGAAAACTTGGGGAATCTCGATTC
JMSF041C11+ CACGGCTCGAATCTGGGTCGGGCACTGTTTTCTTGAGGAAAACTTGGGGAATCTCGATTC
                      ____________________________________________________________
consensus CACGGCTCGAATCTGGGTCGGGCACTGTTTTCTTGAGGAAAACTTGGGGAATCTCGATTC
 
. : . : . : . : . : . :
JMFN006I09+ GGTTCCAAAGAATCCGAGTTTGGAGGTGCAATTGGAGGAAGTTGAAAGGCTACGGCAATG
JMSF041C11+ GGTTCCAAAGAATCCGAGTTTGGAGGTGCAATTGGAGGAAGTTGAAAGGCTACGGCAATG
                      ____________________________________________________________
consensus GGTTCCAAAGAATCCGAGTTTGGAGGTGCAATTGGAGGAAGTTGAAAGGCTACGGCAATG
 
. : . : . : . : . : . :
JMFN006I09+ GAATAGAGCGCGAGGGCGAGGGGAAGGAGCGGGAGAAAGCGAGGCGAAGACTCTGGTCAA
JMSF041C11+ GAATAGAGCGCGAGGGCGAGGGGAAGGAGCGGGAGAAAGCGAGGCGAAGACTCTGGTCAA
                      ____________________________________________________________
consensus GAATAGAGCGCGAGGGCGAGGGGAAGGAGCGGGAGAAAGCGAGGCGAAGACTCTGGTCAA
 
. : . : . : . : . : . :
JMFN006I09+ GTTCGTAGTAGAAGTAGGAGTGGAAATCCCCGCCATTGATGGCCCAATCGAAGTTTCTGG
JMSF041C11+ GTTCGTAGTAGAAGTAGGAGTGGAAATCCCCGCCATTGATGGCCCAATCGAAGTTTCTGG
                      ____________________________________________________________
consensus GTTCGTAGTAGAAGTAGGAGTGGAAATCCCCGCCATTGATGGCCCAATCGAAGTTTCTGG
 
. : . : . : . : . : . :
JMFN006I09+ TTAGTTATTATGGAGTTTTAGCTTCGTTTTCTTGAGGTTTTGGGGTCAGTAGAAAAATTT
JMSF041C11+ TTAGTTATTATGGAGTTTTAGCTTCGTTTTCTTGAGGTTTTGGGGTCAGTAGAAAAATTT
                      ____________________________________________________________
consensus TTAGTTATTATGGAGTTTTAGCTTCGTTTTCTTGAGGTTTTGGGGTCAGTAGAAAAATTT
 
. : . : . : . : . : . :
JMFN006I09+ GGGTTCGCAGCTTTCTG
JMSF041C11+ GGGTTCGCAGCTTTCTGGTTTGAATCGGCGAATCAGAATCCTCTGTGCGTGCCAGCCTTA
                      ____________________________________________________________
consensus GGGTTCGCAGCTTTCTGGTTTGAATCGGCGAATCAGAATCCTCTGTGCGTGCCAGCCTTA