Contig 007998:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF039I17Sequence623007998 (2)emb|CDP10006.1|2e-42unnamed protein product [Coffea canephora]859004340 (2)ref|XP_010325502.1|72.4PREDICTED: uncharacterized protein LOC104648963 [Solanum lycopersicum]
JMSF051E12Sequence665007998 (2)emb|CDP10006.1|7e-48unnamed protein product [Coffea canephora]731004340 (2)ref|XP_010325502.1|72.0PREDICTED: uncharacterized protein LOC104648963 [Solanum lycopersicum]

Alignment

This contig is upended


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JMSF051E12+                                                                  TCCTA
                      ____________________________________________________________
consensus                                                                    TCCTA
 
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JMSF051E12+           ACAGGCAAAAGAAGGGGCTTCTCGCCCACTTTTGAACTCTTAACAGTCTGTTCTTCAACA
JMSF039I17+                                                TCTTAACAGTCTGTTCTTCAACA
                      ____________________________________________________________
consensus             ACAGGCAAAAGAAGGGGCTTCTCGCCCACTTTTGAACTCTTAACAGTCTGTTCTTCAACA
 
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JMSF051E12+           CCATCTTTAGCCACAACTACAACTGCTTCACCCCTACGGTACTGATTATTCCATGTCTGC
JMSF039I17+           CCATCTTTAGCCACAACTACAACTGCTTCACCCCTACGGTACTGATTATTCCATGTCTGC
                      ____________________________________________________________
consensus             CCATCTTTAGCCACAACTACAACTGCTTCACCCCTACGGTACTGATTATTCCATGTCTGC
 
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JMSF051E12+           ATAACTTTATTATCGCTACTACTGTCATGATCATCGAACACAGAGCCATCCTCAGACTCA
JMSF039I17+           ATAACTTTATTATCGCTACTACTGTCATGATCATCGAACACAGAGCCATCCTCAGACTCA
                      ____________________________________________________________
consensus             ATAACTTTATTATCGCTACTACTGTCATGATCATCGAACACAGAGCCATCCTCAGACTCA
 
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JMSF051E12+           TCATCAAAAACAGATGAAACCTGAAGCAATCTAGAAACATAGGACTGGGCATTATCAAAC
JMSF039I17+           TCATCAAAAACAGATGAAACCTGAAGCAATCTAGAAACATAGGACTGGGCATTATCAAAC
                      ____________________________________________________________
consensus             TCATCAAAAACAGATGAAACCTGAAGCAATCTAGAAACATAGGACTGGGCATTATCAAAC
 
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JMSF051E12+           TTTGTTGTTGCAAACCCATTATTTTCCTTGTCTATCTCGTCGCTTTTCCGGCTAAACAGG
JMSF039I17+           TTTGTTGTTGCAAACCCATTATTTTCCTTGTCTATCTCGTCGCTTTTCCGGCTAAACAGG
                      ____________________________________________________________
consensus             TTTGTTGTTGCAAACCCATTATTTTCCTTGTCTATCTCGTCGCTTTTCCGGCTAAACAGG
 
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JMSF051E12+           CCGTAAGAGACGGCGATCCCGACGAAGATGAGCTGGAGGATTTCCCAGCTTCTGGTGTGG
JMSF039I17+           CCGTAAGAGACGGCGATCCCGACGAAGATGAGCTGGAGGATTTCCCAGCTTCTGGTGTGG
                      ____________________________________________________________
consensus             CCGTAAGAGACGGCGATCCCGACGAAGATGAGCTGGAGGATTTCCCAGCTTCTGGTGTGG
 
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JMSF051E12+           AGAGATTGGTTGATGGAGTCGGGAGGGGGTTGTGAAGGGAAAAGAGGGAGCAGAACCAGG
JMSF039I17+           AGAGATTGGTTGATGGAGTCGGGAGGGGGTTGTGAAGGGAAAAGAGGGAGCAGAACCAGG
                      ____________________________________________________________
consensus             AGAGATTGGTTGATGGAGTCGGGAGGGGGTTGTGAAGGGAAAAGAGGGAGCAGAACCAGG
 
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JMSF051E12+           AAAAGTGTAACGATTAGAGCTTTGAACAAGAAGTGGTTGTAGTAGTACTTACTTGGATTG
JMSF039I17+           AAAAGTGTAACGATTAGAGCTTTGAACAAGAAGTGGTTGTAGTAGTACTTACTTGGATTG
                      ____________________________________________________________
consensus             AAAAGTGTAACGATTAGAGCTTTGAACAAGAAGTGGTTGTAGTAGTACTTACTTGGATTG
 
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JMSF051E12+           TGAGTTGCATGGTTGAGTTGAGGTTCTGAGTCCGCCATTGATGGAGTTAAGAAGAAGAAG
JMSF039I17+           TGAGTTGCATGGTTGAGTTGAGGTTCTGAGTCCGCCATTGATGGAGTTAAGAAGAAGAAG
                      ____________________________________________________________
consensus             TGAGTTGCATGGTTGAGTTGAGGTTCTGAGTCCGCCATTGATGGAGTTAAGAAGAAGAAG
 
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JMSF051E12+           GAGAAGATGGCGAAGAAGGAGAGAAGTGTGAGGAGGAGCAGAGGAAAAGTATTATAGAGA
JMSF039I17+           GAGAAGATGGCGAAGAAGGAGAGAAGTGTGAGGAGGAGCAGAGGAAAAGTATTATAGAGA
                      ____________________________________________________________
consensus             GAGAAGATGGCGAAGAAGGAGAGAAGTGTGAGGAGGAGCAGAGGAAAAGTATTATAGAGA
 
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JMSF051E12+           GAAAAAGAAGAAAAACAAAGAGAGTGATGATGAGGAAAGTTTTTGGGAGCAGTGAC    
JMSF039I17+           GAAAAAGAAGAAAAACAAAGAGAGTGATGATGAGGAAAGTTTTTGGGAGCAGTGACTTTC
                      ____________________________________________________________
consensus             GAAAAAGAAGAAAAACAAAGAGAGTGATGATGAGGAAAGTTTTTGGGAGCAGTGACTTTC