Contig 007996:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN038M04Sequence618007996 (4)ref|XP_006349714.1|1e-97PREDICTED: BI1-like protein-like [Solanum tuberosum]
JMFS116H06Sequence563007996 (4)ref|XP_006349714.1|3e-84PREDICTED: BI1-like protein-like [Solanum tuberosum]
JMSF039E24Sequence638007996 (4)ref|XP_006349714.1|6e-82PREDICTED: BI1-like protein-like [Solanum tuberosum]894007996 (4)ref|XP_010038064.1|3e-122PREDICTED: BI1-like protein [Eucalyptus grandis] gb|KCW49862.1| hypothetical pro

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF039E24- GGCATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCAT
                      ____________________________________________________________
consensus GGCATCAATAGTGCATACAAATATACAAATATACAGNTTCAACAACGGTGCCACGAGCAT
 
. : . : . : . : . : . :
rJMSF039E24- CATTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTC
                      ____________________________________________________________
consensus CATTCAAAATAATCCATGATGGTTGGGAGAGAATAGAAAGAAAGCAATAACTGCACACTC
 
. : . : . : . : . : . :
rJMSF039E24- TTCAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGAT
                      ____________________________________________________________
consensus TTCAACAGTTCAACTATCAGCAGCTCTAAAAACAGTCAAGAGGGATAGGAATAGGTTGAT
 
. : . : . : . : . : . :
rJMSF039E24- GACATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGAT
                      ____________________________________________________________
consensus GACATCAAGGTACAAGGCGACGGCGGCCCAGATATATTCATCGTAACTGTATCGCTTGAT
 
. : . : . : . : . : . :
JMFN038M04+ ACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
rJMSF039E24- AAGGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
                      ____________________________________________________________
consensus AAGGTTATCCGTGTCATATACGATGTACCCACAGAATACTATGGATGCCAGACAGCCATA
 
. : . : . : . : . : . :
JMFS116H06+ CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
JMFN038M04+ GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
rJMSF039E24- GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
JMSF039E24+ CATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
                      ____________________________________________________________
consensus GATCATCACTGAGATCTTCCCCATAGGAAAGAATATCTGGATCAGTGAAAACAGCATAAG
 
. : . : . : . : . : . :
JMFS116H06+ CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
JMFN038M04+ CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
rJMSF039E24- CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
JMSF039E24+ CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
                      ____________________________________________________________
consensus CACCAGAATAGCACCGAACAAGAATGGTCCTAGGAAATTAAAATCCTGGCCTCTCTTTGC
 
. : . : . : . : . : . :
JMFS116H06+ CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
JMFN038M04+ CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
rJMSF039E24- CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
JMSF039E24+ CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
                      ____________________________________________________________
consensus CGCCCAGAATGTGTACAGAGTAAGAGCAATCACAACTGCAGCTGTTAAAATGGCTGCTTC
 
. : . : . : . : . : . :
JMFS116H06+ TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
JMFN038M04+ TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
rJMSF039E24- TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
JMSF039E24+ TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
                      ____________________________________________________________
consensus TAGGATCACTTTCCCACTAGTGTATGCACAAGTCAATCCGGTGGCGAAGGAAAGAGCCAC
 
. : . : . : . : . : . :
JMFS116H06+ CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
JMFN038M04+ CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
rJMSF039E24- CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
JMSF039E24+ CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
                      ____________________________________________________________
consensus CGTGAAAATGCCAAGCAGTATATAGTTGTACGGATGCTTCTGGTGGTAGTAATACAACGG
 
. : . : . : . : . : . :
JMFS116H06+ GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
JMFN038M04+ GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
rJMSF039E24- GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
JMSF039E24+ GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
                      ____________________________________________________________
consensus GCATAGCACAATGAAGGGCGTGATGATGAGAACAATATAGAGAGCCAAACCAGCGCCAGT
 
. : . : . : . : . : . :
JMFS116H06+ AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
JMFN038M04+ AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
rJMSF039E24- AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
JMSF039E24+ AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
                      ____________________________________________________________
consensus AGTTGCAAAGAAGCGAGAAATATGATGATTAGTGATGACGACGGCGCCGACGGCGATGGA
 
. : . : . : . : . : . :
JMFS116H06+ CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
JMFN038M04+ CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
rJMSF039E24- CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
JMSF039E24+ CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
                      ____________________________________________________________
consensus CAAGACCAATTGGATGGCTACAATGGAATACACTTTCCGAATGAATGACCACCGGAGTTC
 
. : . : . : . : . : . :
JMFS116H06+ CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
JMFN038M04+ CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
rJMSF039E24- CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCCGGGACTCCTCGTCGCCTTTGT
JMSF039E24+ CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
                      ____________________________________________________________
consensus CGGATTCTCCAGCATCGTCGGATACAGCGGCGCCGACCC-GGACTCCTCGTCGCCTTTGT
 
. : . : . : . : . : . :
JMFS116H06+ ACGCATAGTTCCACATCTCTCCGATCAAA
JMFN038M04+ ACGCATAGTTCCACATCTCTCCGATCAAA
rJMSF039E24- ACGCATAGTTCCACATCTCTCCGATCAAA
JMSF039E24+ ACGCATAGTTCCACATCTCTCCGATCAAACCAATGTCTTCCTCAATATTCCGATTACTTG
                      ____________________________________________________________
consensus ACGCATAGTTCCACATCTCTCCGATCAAACCAATGTCTTCCTCAATATTCCGATTACTTG
 
. : . : . : . : . : . :
JMSF039E24+ ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC
                      ____________________________________________________________
consensus ACTTTGAAATGCGCGGAGCGGAGTGTATATATTTTGATTTTTGAGAAGTTGATCAGAGCC