Contig 007992:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018G22Sequence426007992 (2)emb|CDP17757.1|5e-10unnamed protein product [Coffea canephora]
JMSF038L02Sequence644007992 (2)ref|XP_009603522.1|71.6PREDICTED: uncharacterized protein LOC104098480 [Nicotiana tomentosiformis]875019394ref|XP_009779222.1|211PREDICTED: uncharacterized protein LOC104228458 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF038L02+                           GCGCCCTCGAATTCCTCGATTCCATCTCCGGCCACCTCCGTATG
                      ____________________________________________________________
consensus                             GCGCCCTCGAATTCCTCGATTCCATCTCCGGCCACCTCCGTATG
 
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JMSF038L02+           CCCGCCAATTTTATCCTTCACCAAGTCCTCCTCCTTCTCCTGTTCATTTTCACCATGATA
                      ____________________________________________________________
consensus             CCCGCCAATTTTATCCTTCACCAAGTCCTCCTCCTTCTCCTGTTCATTTTCACCATGATA
 
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JMSF038L02+           ATTCAATTCAATCCCAGCCTTCTCCTCCTCACCACATTTCTGCACTTCCGGAACCTGAAA
                      ____________________________________________________________
consensus             ATTCAATTCAATCCCAGCCTTCTCCTCCTCACCACATTTCTGCACTTCCGGAACCTGAAA
 
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JMSF018G22+                                           CTCCACGCCGCTTGTGGTTAACGACATA
JMSF038L02+           TCCATCGATTTTCCCGTTCACGCGACGTTCTCCTCCACGCCGCTTGTGGTTAACGACATA
                      ____________________________________________________________
consensus             TCCATCGATTTTCCCGTTCACGCGACGTTCTCCTCCACGCCGCTTGTGGTTAACGACATA
 
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JMSF018G22+           CGGAGACGGTGAGAGCGGTGCGGAGGAAAGCTCGGGGATCGGAGCTGATACCGGAGTTAT
JMSF038L02+           CGGAGACGGTGAGAGCGGTGCGGAGGAAAGCTCGGGGATCGGAGCTGATACCGGAGTTAT
                      ____________________________________________________________
consensus             CGGAGACGGTGAGAGCGGTGCGGAGGAAAGCTCGGGGATCGGAGCTGATACCGGAGTTAT
 
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JMSF018G22+           ATACAGAGCCGGAGAAATGTAAACATGATTGGCAGAATGAGGCTTGGAATCAACCACTTC
JMSF038L02+           ATACAGAGCCGGAGAAATGTAAACATGATTGGCAGAATGAGGCTTGGAATCAACCACTTC
                      ____________________________________________________________
consensus             ATACAGAGCCGGAGAAATGTAAACATGATTGGCAGAATGAGGCTTGGAATCAACCACTTC
 
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JMSF018G22+           CTCCCTCCGAGCACCATTATACGCGCCACCGTTACCGGTGCTCTTATTGGTATAACGCGC
JMSF038L02+           CTCCCTCCGAGCACCATTATACGCGCCACCGTTACCGGTGCTCTTATTGGTATAACGCGC
                      ____________________________________________________________
consensus             CTCCCTCCGAGCACCATTATACGCGCCACCGTTACCGGTGCTCTTATTGGTATAACGCGC
 
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JMSF018G22+           CTGCGGTTTGGTGGCGAATTTCTGGAAACCGAATGGCGATTTGTAGGTATCTCGATCGCG
JMSF038L02+           CTGCGGTTTGGTGGCGAATTTCTGGAAACCGAATGGCGATTTGTAGGTATCTCGATCGCG
                      ____________________________________________________________
consensus             CTGCGGTTTGGTGGCGAATTTCTGGAAACCGAATGGCGATTTGTAGGTATCTCGATCGCG
 
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JMSF018G22+           AGGCTCGATAAGATTCTCTAGGGCGATGGTCGTGAAAGTAGGCATGTTGGCCGGCGGCAG
JMSF038L02+           AGGCTCGATAAGATTCTCTAGGGCGATGGTCGTGAAAGTAGGCATGTTGGCCGGCGGCAG
                      ____________________________________________________________
consensus             AGGCTCGATAAGATTCTCTAGGGCGATGGTCGTGAAAGTAGGCATGTTGGCCGGCGGCAG
 
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JMSF018G22+           AGATCAGAAAATGGTGAAATTTGTGGCGGCGGAGACGGAGGCGAAAGAGAGACGAGGCGG
JMSF038L02+           AGATCAGAAAATGGTGAAATTTGTGGCGGCGGAGACGGAGGCGAAAGAGAGACGAGGCGG
                      ____________________________________________________________
consensus             AGATCAGAAAATGGTGAAATTTGTGGCGGCGGAGACGGAGGCGAAAGAGAGACGAGGCGG
 
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JMSF018G22+           GAAGGTGGAGGGAGAGTTTTGGAATGTGGTGAATGGCC                      
JMSF038L02+           GAAGGTGGAGGGAGAGTTTTGGAATGTGGTGAATGGCCGTGTGATTCTCCACCCACTCTC
                      ____________________________________________________________
consensus             GAAGGTGGAGGGAGAGTTTTGGAATGTGGTGAATGGCCGTGTGATTCTCCACCCACTCTC