Contig 007982:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001H14Sequence532007982 (7)ref|XP_009618477.1|2e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif483007982 (7)ref|XP_009618477.1|1e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif
JMFF037N15Sequence532007982 (7)ref|XP_009618477.1|2e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif502007982 (7)ref|XP_009618477.1|1e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif
JMFN034N05Sequence526007982 (7)ref|XP_009618477.1|2e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif
JMSF036P24Sequence573007982 (7)ref|XP_009618477.1|3e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif530007982 (7)ref|XP_009618477.1|2e-39PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Nicotiana tomentosif

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF001H14+ TTATCATTGAAGC
JMFF037N15+ TTATCATTGAAGC
JMFN034N05+ ATCATTGAAGC
JMSF036P24+ TAAGCCAAATGAAATCAAAATTATCATTGAAGC
                      ____________________________________________________________
consensus TAAGCCAAATGAAATCAAAATTATCATTGAAGC
 
. : . : . : . : . : . :
rJMSF036P24- AATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
JMFF001H14+ ATATATATGAAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
rJMFF037N15- AAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
rJMFF001H14- AAATGAGGCAATAGGTTCTTGATTCAGGGTC
JMFF037N15+ ATATATATGAAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
JMFN034N05+ ATATATATGAAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
JMSF036P24+ ATATATATGAAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
                      ____________________________________________________________
consensus ATATATATGAAATTGCATTCCCAACCTCAAAATGAGGCAATAGGTTCTTGATTCAGGGTC
 
. : . : . : . : . : . :
rJMSF036P24- GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
JMFF001H14+ GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
rJMFF037N15- GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
rJMFF001H14- GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
JMFF037N15+ GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
JMFN034N05+ GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
JMSF036P24+ GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
                      ____________________________________________________________
consensus GAAGTGCAAAAGAGATTCAATGAAATCATGAAAGTAGATCTGAAGCCTCAGCATAGATGA
 
. : . : . : . : . : . :
rJMSF036P24- AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
JMFF001H14+ AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
rJMFF037N15- AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
rJMFF001H14- AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
JMFF037N15+ AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
JMFN034N05+ AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
JMSF036P24+ AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
                      ____________________________________________________________
consensus AGAAAGAGGATAAAAAAATTAACATCGTTCATTGATCAAATTATTCCTAGAGTCTTCTCA
 
. : . : . : . : . : . :
rJMSF036P24- GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
JMFF001H14+ GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
rJMFF037N15- GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
rJMFF001H14- GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
JMFF037N15+ GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
JMFN034N05+ GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
JMSF036P24+ GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
                      ____________________________________________________________
consensus GAGATGTCTGCAACAATCAATGGTGCTTTACCTCAAAAAGGCCATCTGGACCCCATGGAA
 
. : . : . : . : . : . :
rJMSF036P24- ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
JMFF001H14+ ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
rJMFF037N15- ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
rJMFF001H14- ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
JMFF037N15+ ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
JMFN034N05+ ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
JMSF036P24+ ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
                      ____________________________________________________________
consensus ACTCCTTATTGCGAATGTGCATGTATGGATATGCAGGGGGTTCCTCGAAGTGGGGATGAC
 
. : . : . : . : . : . :
rJMSF036P24- CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
JMFF001H14+ CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
rJMFF037N15- CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
rJMFF001H14- CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
JMFF037N15+ CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
JMFN034N05+ CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
JMSF036P24+ CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
                      ____________________________________________________________
consensus CCTTGGAAAGATTAACAGCTGCCAGGATAGTACACGCGACTATTCCAGCATAGGTGATTT
 
. : . : . : . : . : . :
rJMSF036P24- TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
JMFF001H14+ TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
rJMFF037N15- TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
rJMFF001H14- TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
JMFF037N15+ TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
JMFN034N05+ TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
JMSF036P24+ TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
                      ____________________________________________________________
consensus TCTCCCACTTTGAAGCTTCGGCGGCCTCGTCATGATGGGCGGAGGAAGAAAAGCTACGCT
 
. : . : . : . : . : . :
rJMSF036P24- TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
JMFF001H14+ TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
rJMFF037N15- TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
rJMFF001H14- TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
JMFF037N15+ TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
JMFN034N05+ TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
JMSF036P24+ TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
                      ____________________________________________________________
consensus TAGAAGCCGGAGCCCGGCGAGAAACGCCACCGCGGAGGGCGGAGCGGATGCTGGATCTCA
 
. : . : . : . : . : . :
rJMSF036P24- CAATCGTCGACGCCATTCTCTCTCAAATTGACTGACCTTTTGGCTTTTGCGTCTGCGTTC
JMFF001H14+ CAATCGTCGACGCCATTCTCTCTCAAATTGA
rJMFF037N15- CAATCGTCGACGCCATTCTCTCTCAAATTGA
rJMFF001H14- CAATCGTCGACGCCATTCTCTCTCAAATTGA
JMFF037N15+ CAATCGTCGACGCCATTCTCTCTCAAATTGA
JMFN034N05+ CAATCGTCGACGCCATTCTCTCTCAAATTGA
JMSF036P24+ CAATCGTCGACGCCATTCTCTCTCAAATTGACTGACCTTTTGGCTTTTGCGTCTGCGTTC
                      ____________________________________________________________
consensus CAATCGTCGACGCCATTCTCTCTCAAATTGACTGACCTTTTGGCTTTTGCGTCTGCGTTC