Contig 007979:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF036D05+                                                    AGTAAACAAGCTTGAAAAA
                      ____________________________________________________________
consensus                                                      AGTAAACAAGCTTGAAAAA
 
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JMSF036D05+           CTTGCTGAGGGTCCTTGATTTGGACCTTGTTTGGTGTTAGAAACATTAGACCAAGCATTC
                      ____________________________________________________________
consensus             CTTGCTGAGGGTCCTTGATTTGGACCTTGTTTGGTGTTAGAAACATTAGACCAAGCATTC
 
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JMSF036D05+           CTAGGTCTTGCAGGCCTTCCCTCAGTGTTAGGGATGGCTCTGTTCATTGGTGCATTTTGT
                      ____________________________________________________________
consensus             CTAGGTCTTGCAGGCCTTCCCTCAGTGTTAGGGATGGCTCTGTTCATTGGTGCATTTTGT
 
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JMSF036D05+           CGAACAGGTAGAGGGCGAGTGGTACCTGTGTTCTGTCTTCCCTTCTCTGCTTCGAAAACC
                      ____________________________________________________________
consensus             CGAACAGGTAGAGGGCGAGTGGTACCTGTGTTCTGTCTTCCCTTCTCTGCTTCGAAAACC
 
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JMSF036D05+           TCCCCAGATTTGGCTTTGCTCAACAGAGATGGTTCCTCATCAACAATAGTAGCTTTTTCC
                      ____________________________________________________________
consensus             TCCCCAGATTTGGCTTTGCTCAACAGAGATGGTTCCTCATCAACAATAGTAGCTTTTTCC
 
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JMSF036D05+           TGCGCAAACGAGAATCCTTTTACCTGTTTTTCACCTCCAATTTCTGTCTCAGATGGTCTA
                      ____________________________________________________________
consensus             TGCGCAAACGAGAATCCTTTTACCTGTTTTTCACCTCCAATTTCTGTCTCAGATGGTCTA
 
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JMSF036D05+           GACACCATCTGCTCCTCCACGATTACTCTAGGGTTCCCAGACTGCTCTTTCGATTTTTGT
                      ____________________________________________________________
consensus             GACACCATCTGCTCCTCCACGATTACTCTAGGGTTCCCAGACTGCTCTTTCGATTTTTGT
 
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JMSF003M17+                                ATGCGTTGTTTGTTCTTATGGATTGAATGGACCTCCGAC
JMSF036D05+           TCTCCTTTCACAGGATTGTTGATGCGTTGTTTGTTCTTATGGATTGAATGGACCTCCGAC
                      ____________________________________________________________
consensus             TCTCCTTTCACAGGATTGTTGATGCGTTGTTTGTTCTTATGGATTGAATGGACCTCCGAC
 
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JMSF003M17+           AACCTTCCTCCATCACAGCACCCACCATTGTGTCGTCTAGATGCTCCGATGGCAGTCTCG
JMSF036D05+           AACCTTCCTCCATCACAGCACCCACCATTGTGTCGTCTAGATGCTCCGATGGCAGTCTCG
                      ____________________________________________________________
consensus             AACCTTCCTCCATCACAGCACCCACCATTGTGTCGTCTAGATGCTCCGATGGCAGTCTCG
 
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JMSF003M17+           CGTCCAGGTCGTCTCCGAGAAGCTGTGAGACCTCCAGAACCGTCCGGCGAGACCTCCAGA
JMSF036D05+           CGTCCAGGTCGTCTCCGAGAAGCTGTGAGACCTCCAGAACCGTCCGGCGAGACCTCCAGA
                      ____________________________________________________________
consensus             CGTCCAGGTCGTCTCCGAGAAGCTGTGAGACCTCCAGAACCGTCCGGCGAGACCTCCAGA
 
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JMSF003M17+           GCTGTCTGTCGAATGGGTGGTGGACTCGAGCTGGAGGGATGAGTGACGTCTCTGGCGCAG
JMSF036D05+           GCTGTCTGTCGAATGGGTGGTGGACTCGAGCTGGAGGGATGAGTGACGTCTCTGGCGCAG
                      ____________________________________________________________
consensus             GCTGTCTGTCGAATGGGTGGTGGACTCGAGCTGGAGGGATGAGTGACGTCTCTGGCGCAG
 
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JMSF003M17+           CAGCGATGAAGAGTCGGCATTCGGCTTAGGCCTTAGAGTTGAAATGTTGAATGAGAGACC
JMSF036D05+           CAGCGATGAAGAGTCGGCATTCGGCTTAGGCCTTAGAGTTGAAATGTTGAATGAGAGACC
                      ____________________________________________________________
consensus             CAGCGATGAAGAGTCGGCATTCGGCTTAGGCCTTAGAGTTGAAATGTTGAATGAGAGACC