Contig 007958:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF033M08Sequence672007958 (2)ref|XP_011102070.1|9e-61PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 637008481 (7)ref|XP_009600347.1|8e-28PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650
JMSF037O03Sequence672007958 (2)ref|XP_011102070.1|2e-65PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein 711008481 (7)ref|XP_009600347.1|2e-57PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF037O03+ CCATTGAACATATTGTTCTCCAAGTTTAAA
JMSF033M08+ TCCAAGTTTAAA
                      ____________________________________________________________
consensus CCATTGAACATATTGTTCTCCAAGTTTAAA
 
. : . : . : . : . : . :
JMSF037O03+ TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
JMSF033M08+ TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
                      ____________________________________________________________
consensus TATACAAGAGTTGTTATATTTCCCAAGTATTTCGGAATTGGCCCCGACAATCGATTCACA
 
. : . : . : . : . : . :
JMSF037O03+ GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
JMSF033M08+ GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
                      ____________________________________________________________
consensus GTAACAGATATATATTCCAATTTCATAGAAGCCCATTCAGGGGGGATTGTACCACTTAAG
 
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JMSF037O03+ TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
JMSF033M08+ TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
                      ____________________________________________________________
consensus TAGCTGCGGCTGATATCACTGCAGAGAAAAACACTAATAATCAATAAAGCAGAGAATATC
 
. : . : . : . : . : . :
JMSF037O03+ AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
JMSF033M08+ AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
                      ____________________________________________________________
consensus AATAAGAACTTAAGAAGTGGTGATTATTGCATAAATGTGGAAATTATAGGTTGGTACATT
 
. : . : . : . : . : . :
JMSF037O03+ ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
JMSF033M08+ ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
                      ____________________________________________________________
consensus ATCTTAAGAAATGGTAATTTCACCAAGGTAGGAGGAAGGACACCTTGCAGATCCTGTCCC
 
. : . : . : . : . : . :
JMSF037O03+ TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
JMSF033M08+ TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
                      ____________________________________________________________
consensus TGCAAAATTATGCTTTGAACATGGCAAATACCAGCAGGGAAGCTACAATTGCAGGTGAGA
 
. : . : . : . : . : . :
JMSF037O03+ GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
JMSF033M08+ GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
                      ____________________________________________________________
consensus GTATTATTGTAGGCAGGCATATCTTTCCTTTCTGGTGTGAACCAGTTTGAGTTGTTTTCA
 
. : . : . : . : . : . :
JMSF037O03+ CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
JMSF033M08+ CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
                      ____________________________________________________________
consensus CAAGGATTTACTCTAAAATCCCAATCTTTCTTCCCCACTTCATCTGCTATTTCCTTCAGT
 
. : . : . : . : . : . :
JMSF037O03+ GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
JMSF033M08+ GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
                      ____________________________________________________________
consensus GCGTTTAATTCATCTAGAGGAAGATGCCCACTCTGCGCTTCAAGGAATCTTGCATTGAAG
 
. : . : . : . : . : . :
JMSF037O03+ GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
JMSF033M08+ GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
                      ____________________________________________________________
consensus GAGAGTAGTATAATTGGTATGAGGATTATGAACATGGAGGCTGACATGGTTGAATGCTTG
 
. : . : . : . : . : . :
JMSF037O03+ GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTT
JMSF033M08+ GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTTGCATTGAATAGTCCAGTTC
                      ____________________________________________________________
consensus GGATTGGAAGATGAAGATCTGCTAGCTGCATTATTTTGCTTGCATTGAATAGTCCAGTTC