Contig 007954:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS155D09+                                                          GTTAGGCCGGGGC
                      ____________________________________________________________
consensus                                                            GTTAGGCCGGGGC
 
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JMFS005B11+                                                           CCCATTCCCCGT
JMFS155D09+           GGGGCAGGAAATGGGTCCTGTNCCGTCCCCCCGTCCCTGAATTCAATTCCCATTCCCCGT
                      ____________________________________________________________
consensus             GGGGCAGGAAATGGGTCCTGTNCCGTCCCCCCGTCCCTGAATTCAATTCCCATTCCCCGT
 
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JMFS005B11+           CTCGGCCAGTTGGGGATTGGGAATTACCCCCATCCCGGGGATTTTCCGGGACTGAGATTC
JMFS155D09+           CTCGGCCAGTTGGGGATTGGGAATTACCCCCATCCCGGGGATTTTCCGGGACTGAGATTC
                      ____________________________________________________________
consensus             CTCGGCCAGTTGGGGATTGGGAATTACCCCCATCCCGGGGATTTTCCGGGACTGAGATTC
 
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JMFS005B11+           NCCGCCCTTTTTAGATAGAGTGTAAAATAATATATACAATTTTAATTATTTAATTAGTTT
JMFS155D09+           CCCGCCCTTTTTAGATAGAGTGTAAAATAATATATACAATTTTAATTATTTAATTAGTTT
JMSF033J04+                                                 ATTTTAATTATTTAATTAGTTT
                      ____________________________________________________________
consensus             CCCGCCCTTTTTAGATAGAGTGTAAAATAATATATACAATTTTAATTATTTAATTAGTTT
 
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JMFS005B11+           TTAATTTGATATATTTAAATCTTGAATTACTAGAAATTATAACTTCCGCAATGAGGATGG
JMFS155D09+           TTAATTTGATATATTTAAATCTTGAATTACTAGAAATTATAACTTCCGCAATGAGGATGG
JMSF033J04+           TTAATTTGATATATTTAAATNTTGAATTNCTNGAAATTNTAACTTNCNCNATGNGGATGG
                      ____________________________________________________________
consensus             TTAATTTGATATATTTAAATCTTGAATTACTAGAAATTATAACTTCCGCAATGAGGATGG
 
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JMFS005B11+           CCCCCTGAATTTGGTGGAACATGTAAGCCAAATACAAATTTAAGCATTCAATTTAGGACT
JMFS155D09+           CCCCCTGAATTTGGTGGAACATGTAAGCCAAATACAAATTTAAGCATTCAATTTAGGACT
JMSF033J04+           CCCCCTGAATTTGGTGGAACNTNTNAGCCAAATNCAAATTTNAGCCTTCAATTTNGGNCT
                      ____________________________________________________________
consensus             CCCCCTGAATTTGGTGGAACATGTAAGCCAAATACAAATTTAAGCATTCAATTTAGGACT
 
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JMFS005B11+           GGGAGGTATGGAACAGAGATGCAGTGCTACAGCGCAGTAAAATCCAAGGAATAGAGAGAA
JMFS155D09+           GGGAGGTATGGAACAGAGATGCAGTGCTACAGCGCAGTAAAATCCAAGGAATAGAGAGAA
JMSF033J04+           GGGAGGTNTGGAACAGAGATGCNGTGCTNCAGCNCNGTNAAATNCNAGGAATNGNGNGAA
                      ____________________________________________________________
consensus             GGGAGGTATGGAACAGAGATGCAGTGCTACAGCGCAGTAAAATCCAAGGAATAGAGAGAA
 
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JMFS005B11+           AAAAAAAAGGGCAAACTGGAAATGAATGAAAAGAAGCAAACAAAGCAAACACAGGCAGTG
JMFS155D09+           AAAAAAAAGGGCAAACTGGAAATGAATGAAAAGAAGCAAACAAAGCAAACACAGGCAGTG
JMSF033J04+           AAAAAAAAGGGCAAACTGGAAATGAATGAAAAGAAGCAAACAAAGCAAACACAGGCAGTG
                      ____________________________________________________________
consensus             AAAAAAAAGGGCAAACTGGAAATGAATGAAAAGAAGCAAACAAAGCAAACACAGGCAGTG
 
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JMFS005B11+           ACTACAAACTCATAAAGCTAACCCGGTACTCTGGCTGCTGGCAACGGAGGGCGTGAGACA
JMFS155D09+           ACTACAAACTCATAAAGCTAACCCGGTACTCTGGCTGCTGGCAACGGAGGGCGTGAGACA
JMSF033J04+           ACTACAAACTCATAAAGCTAACCCGGTACTCTGGCTGCTGGCAACGGAGGGCGTGAGACA
                      ____________________________________________________________
consensus             ACTACAAACTCATAAAGCTAACCCGGTACTCTGGCTGCTGGCAACGGAGGGCGTGAGACA
 
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JMFS005B11+           CAGAGGCACTGACAGTGAAGAACCAGCGCCTAGCGAAGTTGGCTTGATTGCTGGAACCAG
JMFS155D09+           CAGAGGCACTGACAGTGAAGAACCAGCGCCTAGCGAAGTTGGCTTGATTGCTGGAACCAG
JMSF033J04+           CAGAGGCACTGACAGTGAAGAACCAGCGCCTAGCGAAGTTGGCTTGATTGCTGGAACCAG
                      ____________________________________________________________
consensus             CAGAGGCACTGACAGTGAAGAACCAGCGCCTAGCGAAGTTGGCTTGATTGCTGGAACCAG
 
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JMFS005B11+           AGAAGCAGGCGGGAGGGGAGAGGA                                    
JMFS155D09+           AGAAGCAGGCGGGAGGGGAGAGGAGAGT                                
JMSF033J04+           AGAAGCAGGCGGGAGGGGAGAGGAGAGTGGGAGACGGGGAGTGAGAGACGAAGAGAGCCC
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consensus             AGAAGCAGGCGGGAGGGGAGAGGAGAGTGGGAGACGGGGAGTGAGAGACGAAGAGAGCCC