| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015N14 | Sequence | 559 | 007950 (11) | ref|XP_009601586.1| | 1e-24 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 490 | 008382 (8) | gb|AGZ13631.1| | 2e-36 | ABCF_EF-3, partial [Trifolium repens] |
| JMFF016G15 | Sequence | 558 | 007950 (11) | ref|XP_009601586.1| | 4e-24 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 827 | 019095 | emb|CDP12894.1| | 4e-112 | unnamed protein product [Coffea canephora] |
| JMFF020J16 | Sequence | 558 | 007950 (11) | ref|XP_009601586.1| | 2e-17 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 505 | 008382 (8) | gb|AGZ13631.1| | 2e-35 | ABCF_EF-3, partial [Trifolium repens] |
| JMFF048J07 | Sequence | 390 | 007950 (11) | ref|XP_009777484.1| | 1e-07 | PREDICTED: ABC transporter F family member 5-like [Nicotiana sylvestris] | 614 | 019183 | |||
| JMFF048P24 | Sequence | 372 | 007950 (11) | ref|XP_009601586.1| | 2e-06 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 559 | 008382 (8) | ref|XP_011025596.1| | 3e-09 | PREDICTED: ABC transporter F family member 5 [Populus euphratica] |
| JMSF020L01 | Sequence | 661 | 007950 (11) | ref|XP_009601586.1| | 2e-45 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 773 | 008382 (8) | ref|XP_006362777.1| | 3e-90 | PREDICTED: ABC transporter F family member 5-like [Solanum tuberosum] |
| JMSF025J22 | Sequence | 646 | 007950 (11) | ref|XP_009601586.1| | 5e-42 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 730 | 008382 (8) | ref|XP_006362777.1| | 2e-95 | PREDICTED: ABC transporter F family member 5-like [Solanum tuberosum] |
| JMSF032H19 | Sequence | 647 | 007950 (11) | ref|XP_009601586.1| | 9e-47 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 705 | 008382 (8) | ref|XP_006362777.1| | 2e-88 | PREDICTED: ABC transporter F family member 5-like [Solanum tuberosum] |
| JMSF032L14 | Sequence | 641 | 007950 (11) | ref|XP_009601586.1| | 6e-45 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 632 | 008382 (8) | ref|XP_006362777.1| | 4e-75 | PREDICTED: ABC transporter F family member 5-like [Solanum tuberosum] |
| JMSF033A22 | Sequence | 627 | 007950 (11) | ref|XP_009601586.1| | 9e-30 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 624 | 008382 (8) | gb|AGZ13631.1| | 5e-45 | ABCF_EF-3, partial [Trifolium repens] |
| JMSF052E09 | Sequence | 680 | 007950 (11) | ref|XP_009601586.1| | 4e-41 | PREDICTED: ABC transporter F family member 5 [Nicotiana tomentosiformis] | 820 | 024703 | gb|AGZ13631.1| | 4e-45 | ABCF_EF-3, partial [Trifolium repens] |
This contig is upended
. : . : . : . : . : . :
JMSF025J22+ TAAAGGCGCTCAAGAACTCTTCCT
____________________________________________________________
consensus TAAAGGCGCTCAAGAACTCTTCCT
. : . : . : . : . : . :
JMSF025J22+ TTACCGTTCTCGAAGCCTCCACCTCGAATTCTTGGTTCAGGAGCGCAATTTTCATATTGG
JMSF032H19+ ACCTCGAATTCTTGGTTCAGGAGCGCAATTTTCATATTGG
JMSF032L14+ GAATTCTTGGTTCAGGAGCGCAATTTTCATATTGG
JMSF020L01+ GAATTCTTGGTTCAGGAGCGCAATTTTCATATTGG
JMSF052E09+ TTTCATATTGG
____________________________________________________________
consensus TTACCGTTCTCGAAGCCTCCACCTCGAATTCTTGGTTCAGGAGCGCAATTTTCATATTGG
. : . : . : . : . : . :
JMSF025J22+ GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
JMSF032H19+ GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
JMSF032L14+ GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
JMSF020L01+ GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
JMSF052E09+ GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
JMSF033A22+ TCTTCCAAACCCGCGATAATCCTCAACT
____________________________________________________________
consensus GTTTGGCCTTGATCACGTTTCCCGAATCGGGTTCTTCCAAACCCGCGATAATCCTCAACT
. : . : . : . : . : . :
JMSF025J22+ GGGTCGTTTTCCCCG--CCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMSF032H19+ GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMSF032L14+ GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMFF015N14+ GGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMFF016G15+ GTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMFF020J16+ TCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMSF020L01+ GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMSF052E09+ GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
JMSF033A22+ GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
____________________________________________________________
consensus GGGTCGTTTTCCCCGCCCCGTTTACACCCACCAGCCCGACTTTCTCGCCCTTCTTAACCT
. : . : . : . : . : . :
JMSF025J22+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMSF032H19+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMSF032L14+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMFF015N14+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMFF016G15+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMFF020J16+ CCCAACTCACATCTTTCAACAGCGTAACCCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMSF020L01+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMSF052E09+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
JMSF033A22+ CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
____________________________________________________________
consensus CCCAACTCACATCTTTCAACAGCGTAA-CCCCCTTGTAGCCTTTGCTGATGTTCTCCAGC
. : . : . : . : . : . :
JMSF025J22+ TTAATCACAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMSF032H19+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMSF032L14+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMFF015N14+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMFF016G15+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMFF020J16+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMFF048J07+ CGGCCATCGGCTTCA
JMSF020L01+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMSF052E09+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
JMSF033A22+ TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
____________________________________________________________
consensus TTAATCCCAGACGAAATGCCAGTGGACGATTGCTTGTTCCAGCGCCGGCCATCGGCTTCA
. : . : . : . : . : . :
JMSF025J22+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMSF032H19+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMSF032L14+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMFF015N14+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMFF016G15+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMFF020J16+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMFF048J07+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMFF048P24+ CGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMSF020L01+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMSF052E09+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
JMSF033A22+ TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
____________________________________________________________
consensus TCGCCGGCGGCGGTGCTCGAGAAGAGACTCTCTATGTCCTCTTTGGCCTCAGTCTCCACT
. : . : . : . : . : . :
JMSF025J22+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMSF032H19+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMSF032L14+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMFF015N14+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMFF016G15+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMFF020J16+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMFF048J07+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMFF048P24+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMSF020L01+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMSF052E09+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
JMSF033A22+ GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
____________________________________________________________
consensus GTTTCCACCGCAACAGCCCGCAGTTTGGATGAAACTCTGAAGCTTTTTCTTGCAGGGCAA
. : . : . : . : . : . :
JMSF025J22+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMSF032H19+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMSF032L14+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMFF015N14+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMFF016G15+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMFF020J16+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMFF048J07+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMFF048P24+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMSF020L01+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMSF052E09+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
JMSF033A22+ TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
____________________________________________________________
consensus TTGAAGAAGGTAGCGGCGGTGAGTTTAAGCGCGGAAGTGGAAGAGATAGGGCGGAAGCGA
. : . : . : . : . : . :
JMSF025J22+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMSF032H19+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMSF032L14+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMFF015N14+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMFF016G15+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMFF020J16+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMFF048J07+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMFF048P24+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGGCGGTAGTGAAAGTGGAGCGGAGGTCCATT
JMSF020L01+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMSF052E09+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
JMSF033A22+ GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
____________________________________________________________
consensus GGGCAGAGCGGCGCCGCCTTGTGGGCGGAGCCGGTAAGGAAAGTGGAGCGGAGGTCCATT
. : . : . : . : . : . :
JMSF025J22+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMSF032H19+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMSF032L14+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMFF015N14+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMFF016G15+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMFF020J16+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMFF048J07+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMFF048P24+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMSF020L01+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMSF052E09+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
JMSF033A22+ CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
____________________________________________________________
consensus CTTAATCTTGAGAAGAAAAAAAAGAGTAAATTAAGGGTTCCGAGAGGCGCGAAGAGAGGA
. : . : . : . : . : . :
JMSF025J22+ AAAAGAAACTCTTCACAGCGCCTCC
JMSF032H19+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMSF032L14+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMFF015N14+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMFF016G15+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMFF020J16+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMFF048J07+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGG-TGAAGAAGAA
JMFF048P24+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMSF020L01+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMSF052E09+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
JMSF033A22+ AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
____________________________________________________________
consensus AAAAGAAACTCTTCACAGCGCCTCCATTAACGAGCACAAGGCAAGCGGGTTGAAGAAGAA
. : . : . : . : . : . :
JMSF032H19+ AAC
JMSF032L14+ AACAGT
JMFF015N14+ AACAGTGTGTAATTGATTACC
JMFF016G15+ AACAGTGTGTAATTGATTA
JMFF020J16+ AACAGTGTGTAATTGATTACC
JMFF048J07+ AACAGTGTGTAATTGA
JMFF048P24+ AACAGTGTGTAATTGAT
JMSF020L01+ AACAGTGTGTAATTGATTACC
JMSF052E09+ AACAGTGTGTAATTGATTACCATATTGAAATTTGACATTTCTTCTATTAATATTTTTGCC
JMSF033A22+ AACAGTGTGTAATTGATTACCATATTGAAATTTGACATTTCTTCTATTAATATTTTTGCC
____________________________________________________________
consensus AACAGTGTGTAATTGATTACCATATTGAAATTTGACATTTCTTCTATTAATATTTTTGCC